Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g02892 | ATGGCGAATTTCCATCTCTGTTCTTCACTTTTCTTCTTCTTCATCCTCTGTTTCGTCCCTGTAATTTTCTCACGATCGCCGGATAATCAAGAGACATTCATCGTTCATGTCTCTAAATCGGAGAAGCCTTCTCTATTCTCCTCTCATAATCACTGGCACTCTTCCATTCTCGAATCACTCTCTCCTTCTCCTCATCCGACGAAGCTTCTTTACAGCTACGAACGTGCCGTTAATGGCTTCTCCGCAAGCATCACGGCTGCGCAGGCGGCGGAGCTGCGTCATGTTCCCGGTGTTATTTCGGTGATTCCTGATCGGATCCGTCAGCTTCATACGACTCGGACGCCTCATTTCTTGGGTCTGGCGGATAACCTAGGGCTTTGGGCTGACACGAATTATGCCGAAGATGTGATTATTGGCGTTCTTGACACCGGAATTTGGCCGGAGAGGCCGAGTTTCTCCGACGAGGGTTTGTCTCCGGTTCCGGCAAGCTGGAAAGGTACCTGCGAGACTGGGGAGGGATTTTCGGCTTCGGCCTGTAATCGGAAGATTATTGGTGCGAGAGCGTACTTTTACGGATACGAGTCTAATTTAGGAAGATCGCTTCGTTCTTCGGATTTCAAATCTGCTAGGGATACGGATGGCCATGGAACTCACACGGCCTCTACGGCTGCAGGTTCGTTCGTAAAGAATGCTAGTTTTTTCCAATATGCTCGTGGAGAAGCCAGAGGCATGGCGAGTAGAGCTCGTATCGCTGCCTACAAGATCTGCTGGGAATATGGTTGTTTCGATTCTGACATACTCGCCGCTATGGATCAGGCGATTGCCGATGGGGTCCACATCATCTCTCTCTCAGTCGGATCCTCGGGCCGTGCGCCTGCGTACTATCGAGATTCAATTGCAATCGGAGCGTTTGGCGCAATGCAGCACGGCGTCGTCGTCTCTTGCTCCGCCGGTAATTCCGGTCCTGGTTCTTACACGGCTGTGAACATTGCTCCTTGGATCCTCACCGTCGGTGCCTCCACAATAGACAGGGAGTTTCTTGCCGATGTCATTCTCGGAGACGGTAGGGTTTTCAGCGGCGTGTCGCTCTACTCCGGCGAACCTCTTGGCGATTCCAAGCTTCCGTTGGTCTACGGTGGAGATTGCGGTAGCAGGTATTGTTATTCTGGATCCCTCGATTCATCGAAAGTCGCCGGAAAAATTGTCGTATGCGATCGAGGAGGGAACGCTAGAGTCGCCAAAGGAAGCGCAGTGAAATCCGCCGGCGGTCTTGGTATGGTACTCGCCAATACGGAGGAAAACGGCGAAGAGCTCTTAGCAGATTCTCATCTTATTCCTGGAACAATGGTCGGCGAAATCGCCGGCAACAAGCTTAGAAACTACACCCATTCGGATCCGAATCCAACTGCTACAATCGTGTTTCGCGGAACTGTCATCGGCAATTCGCCTTCAGCTCCGAGAGTCGCCGCCTTCTCTAGCCGCGGTCCGAACTACCGGACGGCGGAGATTCTAAAACCAGATGTTATAGCTCCGGGAGTTAACATTTTGGCCGGCTGGAGTGGCTACAGCAGTCCGACCAGTCTAAGCATCGATCCTCGAAGAGTCGAGTTCAATATCATCTCCGGAACCTCAATGTCTTGCCCTCACGTCAGTGGCGTCGCCGCCTTGCTCCGAAAGGCTTTTCCAACGTGGTCACCGGCTGCAATCAAATCTGCTCTGATCACTACTTCTTACTCTTTGGACAGTTCCGGCAGCCCAATCAAAGATCTCTCCACAAGCAAAGAATCAAATCCATTCGTCCATGGCGCCGGCCATATCGATCCCAACAAAGCTCTGAACCCAGGCCTGATTTATGATCTCACTCCTCAAGACTACGTTTCATTTCTCTGCTCAATCGGTTACGATTCTAGACAAATAGCCGTTTTCGTGAAGGATTCTTCATACTCCCAACTATGTGAGCACAAACTGAGCAATCCCGGCAACCTGAACTACCCATCATTTGCTGTCGTGTTCGACGACGAGGAGGTGGTGAAATATACAAGAACAGTGACAAATGTTGGAGATGAAACTGATGCTGTTTATGAAGTGAAAGTAGAATCCCCACAAGGCGTTGAAATCAGTGTTGTTCCAAACAAGCTGGAGTTCAATGAAAAGAAGACAACACAGTCTTATGAGATTACATTCACCAAAATCAGTGGATTCAAGGAATTAGCAAGCTTCGGATCAATTCAATGGAGTGATGGAAGCCACAATGTTAGGAGTCCAATTGCTGTCTCGTTTAACACTGGATCCATAGCTTCGATGTAA | 2307 | 50.07 | MANFHLCSSLFFFFILCFVPVIFSRSPDNQETFIVHVSKSEKPSLFSSHNHWHSSILESLSPSPHPTKLLYSYERAVNGFSASITAAQAAELRHVPGVISVIPDRIRQLHTTRTPHFLGLADNLGLWADTNYAEDVIIGVLDTGIWPERPSFSDEGLSPVPASWKGTCETGEGFSASACNRKIIGARAYFYGYESNLGRSLRSSDFKSARDTDGHGTHTASTAAGSFVKNASFFQYARGEARGMASRARIAAYKICWEYGCFDSDILAAMDQAIADGVHIISLSVGSSGRAPAYYRDSIAIGAFGAMQHGVVVSCSAGNSGPGSYTAVNIAPWILTVGASTIDREFLADVILGDGRVFSGVSLYSGEPLGDSKLPLVYGGDCGSRYCYSGSLDSSKVAGKIVVCDRGGNARVAKGSAVKSAGGLGMVLANTEENGEELLADSHLIPGTMVGEIAGNKLRNYTHSDPNPTATIVFRGTVIGNSPSAPRVAAFSSRGPNYRTAEILKPDVIAPGVNILAGWSGYSSPTSLSIDPRRVEFNIISGTSMSCPHVSGVAALLRKAFPTWSPAAIKSALITTSYSLDSSGSPIKDLSTSKESNPFVHGAGHIDPNKALNPGLIYDLTPQDYVSFLCSIGYDSRQIAVFVKDSSYSQLCEHKLSNPGNLNYPSFAVVFDDEEVVKYTRTVTNVGDETDAVYEVKVESPQGVEISVVPNKLEFNEKKTTQSYEITFTKISGFKELASFGSIQWSDGSHNVRSPIAVSFNTGSIASM | 768 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 35145004 | 35147310 | + | Lsi02G028920.1 | Lsi02g02892 | 657634 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g02892 | 768 | SUPERFAMILY | Subtilisin-like | 109 | 616 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi02g02892 | 768 | CDD | PA_subtilisin_like | 349 | 472 | - | - | |
Lsi02g02892 | 768 | PRINTS | Subtilisin serine protease family (S8) signature | 133 | 152 | IPR015500 | - | |
Lsi02g02892 | 768 | PRINTS | Subtilisin serine protease family (S8) signature | 211 | 224 | IPR015500 | - | |
Lsi02g02892 | 768 | PRINTS | Subtilisin serine protease family (S8) signature | 541 | 557 | IPR015500 | - | |
Lsi02g02892 | 768 | Gene3D | - | 629 | 761 | - | - | |
Lsi02g02892 | 768 | SUPERFAMILY | PA domain | 363 | 463 | IPR046450 | - | |
Lsi02g02892 | 768 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 108 | 612 | - | - | |
Lsi02g02892 | 768 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 20 | 762 | IPR045051 | - | |
Lsi02g02892 | 768 | Pfam | Subtilase family | 134 | 581 | IPR000209 | GO:0006508|GO:0008236 | |
Lsi02g02892 | 768 | Pfam | PA domain | 374 | 458 | IPR003137 | - | |
Lsi02g02892 | 768 | CDD | Peptidases_S8_3 | 108 | 578 | IPR034197 | - | |
Lsi02g02892 | 768 | Gene3D | - | 343 | 480 | - | - | |
Lsi02g02892 | 768 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.6 | 20 | 762 | - | - | |
Lsi02g02892 | 768 | Pfam | Fibronectin type-III domain | 661 | 758 | IPR041469 | - | |
Lsi02g02892 | 768 | Gene3D | Peptidase S8/S53 domain | 135 | 625 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi02g02892 | 768 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 542 | 552 | IPR023828 | - | |
Lsi02g02892 | 768 | Pfam | Peptidase inhibitor I9 | 32 | 110 | IPR010259 | - | |
Lsi02g02892 | 768 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 22 | 110 | IPR037045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g02892 | Lsi-Chr2:35145004 | Lsi05g01289 | Lsi-Chr5:20693666 | 0 | dispersed | |
Lsi03g00104 | Lsi-Chr3:1444235 | Lsi02g02892 | Lsi-Chr2:35145004 | 2.27E-48 | transposed | |
Lsi07g00238 | Lsi-Chr7:2631138 | Lsi02g02892 | Lsi-Chr2:35145004 | 2.17E-155 | transposed | |
Lsi09g00086 | Lsi-Chr9:764376 | Lsi02g02892 | Lsi-Chr2:35145004 | 1.77E-18 | transposed | |
Lsi11g01327 | Lsi-Chr11:21876001 | Lsi02g02892 | Lsi-Chr2:35145004 | 1.45E-128 | transposed | |
Lsi02g02892 | Lsi-Chr2:35145004 | Lsi06g00340 | Lsi-Chr6:3784647 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g02892 | - | - | csv:101205194 | 1394.79 |