Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g02914 | ATGGCGCCCTTGGAGAAGGTGGCGAAGATGAATCTAGGTGCGGCGGAGGAAGAATCGCCGCAGGAGATTCATATTCCGGCCGAAATCGATTGGCAAATGCTCGATAAATCTAAATTCTTCTTTCTCGGTGCAGCGTTGTTTTCAGGTGTTTCGGCTTCTCTTTACCCTATGGTGGTATTGAAAACTCGGCAACAGGTTGCTCATTCGCAGCTTTCGTGCATCAGAACTGCATTTTCGCTTGTCCGCCATGAAGGTTTTCGAGCTCTCTACCGAGGATTTGGAACTTCTCTAATGGGGACTATCCCTGCTAGAGCTTTGTACATGGGAGCTCTTGAGATTACAAAGAGCTATGTCGGAACTGCCACCATTAAAGTGGGATTTCCAGAGACTACTGCAGCTACCATTGCTAACGCAGCTGCTGGATTGAGTGCTGCAATGGCAGCTCAGCTTGTATGGACTCCTGTTGATGTTGTGAGTCAAAGACTCATGGTTCAACCTAGCTACAACAATCCCAATTCTTCCTCAACTCATTACATCAATGGAATCGATGCATTTCGAAAGATCCTCAATGCCGATGGCCCCCGAGGCCTTTACCGAGGATTCGGGATATCGATTTTGACCTACGCACCTTCGAATGCTGTGTGGTGGGCTTCTTATTATGTAGCTCAGCGGCTGGTTTGGGGTGGAATTGGTTGTTCTTATTATGCAAAGAAAGTTGATGAAGGCAATGAAAATGGAGGTTGTAGTAATGTCTACAAACCCGATTCCAAGACTGTGATTGCGGTTCAGGGGGCAAGCGCAGCAATGGCAGGGAGTATATCAGCTTTGATAACAATGCCACTTGATACAATCAAGACAAGATTGCAAGTTTTGGATGGGGATGAAAATGGGAGAAGAGGGCCAACTATAGGACAGACATTGAGGAATTTGGTAAGGGAAGGAGGGTGGACGGCATGTTACCGAGGTTTGGCGCCGCGATGTGCGTCGATGTCGATGTCTGCAACAACGATGATCACTACATATGAGTTTTTGAAGCGGCTATCAACAAAGAATCAAGAGAGTTTAACAAGCTAA | 1074 | 46.74 | MAPLEKVAKMNLGAAEEESPQEIHIPAEIDWQMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVAHSQLSCIRTAFSLVRHEGFRALYRGFGTSLMGTIPARALYMGALEITKSYVGTATIKVGFPETTAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQPSYNNPNSSSTHYINGIDAFRKILNADGPRGLYRGFGISILTYAPSNAVWWASYYVAQRLVWGGIGCSYYAKKVDEGNENGGCSNVYKPDSKTVIAVQGASAAMAGSISALITMPLDTIKTRLQVLDGDENGRRGPTIGQTLRNLVREGGWTACYRGLAPRCASMSMSATTMITTYEFLKRLSTKNQESLTS | 357 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 35350355 | 35351515 | - | Lsi02G029140.1 | Lsi02g02914 | 657656 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g02914 | 357 | Pfam | Mitochondrial carrier protein | 47 | 118 | IPR018108 | - | |
Lsi02g02914 | 357 | Pfam | Mitochondrial carrier protein | 262 | 351 | IPR018108 | - | |
Lsi02g02914 | 357 | Pfam | Mitochondrial carrier protein | 134 | 226 | IPR018108 | - | |
Lsi02g02914 | 357 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 35 | 117 | IPR018108 | - | |
Lsi02g02914 | 357 | SUPERFAMILY | Mitochondrial carrier | 32 | 344 | IPR023395 | - | |
Lsi02g02914 | 357 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 10 | 354 | - | - | |
Lsi02g02914 | 357 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN | 10 | 354 | - | - | |
Lsi02g02914 | 357 | PRINTS | Mitochondrial carrier protein signature | 141 | 163 | IPR002067 | GO:0055085 | |
Lsi02g02914 | 357 | PRINTS | Mitochondrial carrier protein signature | 90 | 108 | IPR002067 | GO:0055085 | |
Lsi02g02914 | 357 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 258 | 347 | IPR018108 | - | |
Lsi02g02914 | 357 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 132 | 225 | IPR018108 | - | |
Lsi02g02914 | 357 | Gene3D | Mitochondrial carrier domain | 39 | 356 | IPR023395 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g02914 | Lsi-Chr2:35350355 | Lsi03g00181 | Lsi-Chr3:2374026 | 7.31E-83 | dispersed | |
Lsi05g01397 | Lsi-Chr5:21810658 | Lsi02g02914 | Lsi-Chr2:35350355 | 1.21E-68 | transposed | |
Lsi02g02914 | Lsi-Chr2:35350355 | Lsi04g01400 | Lsi-Chr4:21784232 | 4.20E-173 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g02914 | K15121 | - | csv:101210602 | 624.009 |