Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi02g02919 ATGGCGGACCATTCTTCCAATCGCGATTCTGATTCAGGGTTTGATCATGGCTCATCCCAACCGCGTCTATACAATCCCTACAAGGATCTCCAGGTTCCTTATCGAAACTTCCAGCTTCCAACCTCCCCAGAGTTTCTTTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAACCTCACCTTCTACACTGGTTGCGGTTACCTCGCTGGTGCAGTGGGCGGCGCGTCTACAGGACTCGTTTCTGGCGTTAAATCTTTTGAATCAGGTGATACTATGAAACTCCGGATCAATCGGATCCTGAACTCGTCTGGTCATTCAGGGCGTCTCTGGGGGAATCGGCTCGGCGTGATTGGGCTGCTATATGCTGGTTTGGAGAGCGGGATTGAGGCGGTGAGGGATACGGACGATGTGTGGAACTGTGTTGCAGCAGGACTTGGCACTGGTGCGCTTTATCGTGCAGCAAGAGGGGTGAGATCGGCGGCGGTGGCCGGTGCTATTGGCGGTGTCGTGGTTGGCGTGGCGGTGACGGGTAAGCAGATGTTGAAGCGGTACGTGCCGATATGA 573 55.15 MADHSSNRDSDSGFDHGSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGVAVTGKQMLKRYVPI 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35423583 35424155 + Lsi02G029190.1 Lsi02g02919 657661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi02g02919 190 PANTHER TIM23 2 190 IPR045238 GO:0022857
Lsi02g02919 190 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE 2 190 - -
Lsi02g02919 190 MobiDBLite consensus disorder prediction 1 26 - -
Lsi02g02919 190 Pfam Tim17/Tim22/Tim23/Pmp24 family 64 173 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02919 Lsi-Chr2:35423583 Lsi06g00803 Lsi-Chr6:16786457 1.10E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi02g02919 K17794 - csv:101221925 338.961