Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi02g02944 | ATGAAATCTTTGTCCAAAATGGACAGTTTATGGGATGTTTTGGTAGTGACAGCCATTTTTTTGACCACCATTATTCTCTATAGGAACTGCTTTAGACTTCTCAGATCAAAATTCTGCAACCAACTCCCTTTGGGCTCTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATTTCCTGCGCTTATTCGGACCGTCCCGAAACCTTTATGGATAAGCGTCGCCGCCTGTATGGGAAGGTGTTCAAGTCACATATTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTCAGTAAGTTCATTTTGCAGAGTGATGCCAAGGCTTTTGTACCGTCTTATCCGAAATCTTTGACAGAATTGATGGGGAAGTCTTCTATTTTACTGATAAATGGGAGCTTGCAGAAGAGAATTCATGGTCTTGTGGGAGCTTTCTTCAAGTCTTCACATCTCAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTATCAATGGCAAATTGGACCGAGAACAATCTTATTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTAAATCCTGGTCAAAGGATGGAGTTTCTCCAGAAACAGTTTCAAGAATTCATAGCTGGGCTTATGGCTTTGCCAGTGAACATACCTGGAAGCAGGCTTTACCAATCCTTGCAGGCAAGTTGGACAGCCAAAAGGAATATGGTCAAATTAGTAAAGAAGATAATACAAGAGAGAAAAAGCTGTGGAATTTCACCTGTCCCAAAAGATGTCATGGAAGTTTTGCTCAAAGATGAAACTGAAGAATTAACAGATGATCTAATAGCAGAGAACATGATTGACATGATGATTCCTGGGGAAGATTCAGTGCCAATCTTAATGACTCTTGCAGAGGAAAACTTGAAGATGAAAGGACTGAAAGAGCAGCTCGGTGAGGTGTTGCATTGGAGCGATTACTTATCGATGCCATTTACGCAGAGTGTGATCACTGAGACACTAAGGATGGGAAACATTATAATTGGGGTGATGCGTAAGGCCATGAAAGACATGAAGATAAAAGGATACCTAATACCTAAGGGTTGGTCAGTTCTTACATACTTCAGATCTGTTCATCTTGATGGCAATAACTATGAATGCCCTTACAAGTTCAATCCATGGAGAGACTTGAGTAATTGTAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTAGCTAGGCTTGAAGCTTCCATCTTCCTTCACCACTTTGTCACTCACTTCAGGTTTCAACTACTCACCGACAAAGCCTTTTATCCGTCGGTCAGATTCACAGGTTCCAACTTCCACGACCTCTCCGTCGTCTTCCCCAAATTCCCTCTCCAAATTGCCGGAATCTCCGCCGCTCTGATGACCACCTACGGCACGATTCCTACCTCCGCCGCTCCTGGAACCTCCTCGGACCTCGACTTCGTCTCCCGCGGCAAACAGCGTCTCAAAGCCGGCCTCGCCACTCGCGTTCCATGGAGGCTCATGTTCGATTTCCACTCCTTCACTCTCCCTTTCAACTTCCGCGACACGTTCTCTCGCATCAAAACCAACATCGTCTACTTCCGTATGAATTATGTCATTATCGTCCTCTTGATTCTCTTCTTGAGCCTCCTCTGGCATCCGATTTCTCTCATCGTCTTCACCGCCATGCTTGCCGTTTGGTTGTTCCTGTATTTCCTTCGCGACGAGCCTCTGATCCTCTTCGGCCGTTTGATTAACGATCGACTGGTGATGGCTCTGCTCTCGGTCTTCACACTTGTTTTCTTGTTTCTGACCAAAGCGACACTCAATATCCTGTTGTCACTTCTGATCGCTGCTGTGCTGGTGCTGATCCACGCCGCTGTGAGGAAGACGGATGATCTGTTCTTGGATGAAGGAGCTACTACAGTCTACACTTTCGGTTCGGATGCTCCTGGAACTTCAGTTTCCCTTTATTCTTCGTAA | 2013 | 44.26 | MKSLSKMDSLWDVLVVTAIFLTTIILYRNCFRLLRSKFCNQLPLGSLGWPFIGETIEFISCAYSDRPETFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSHLKAQITKDMECYVKLSMANWTENNLIYLQDETKNISFQVLVKILISLNPGQRMEFLQKQFQEFIAGLMALPVNIPGSRLYQSLQASWTAKRNMVKLVKKIIQERKSCGISPVPKDVMEVLLKDETEELTDDLIAENMIDMMIPGEDSVPILMTLAEENLKMKGLKEQLGEVLHWSDYLSMPFTQSVITETLRMGNIIIGVMRKAMKDMKIKGYLIPKGWSVLTYFRSVHLDGNNYECPYKFNPWRDLSNCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTHFRFQLLTDKAFYPSVRFTGSNFHDLSVVFPKFPLQIAGISAALMTTYGTIPTSAAPGTSSDLDFVSRGKQRLKAGLATRVPWRLMFDFHSFTLPFNFRDTFSRIKTNIVYFRMNYVIIVLLILFLSLLWHPISLIVFTAMLAVWLFLYFLRDEPLILFGRLINDRLVMALLSVFTLVFLFLTKATLNILLSLLIAAVLVLIHAAVRKTDDLFLDEGATTVYTFGSDAPGTSVSLYSS | 670 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 35584038 | 35590784 | + | Lsi02G029440.1 | Lsi02g02944 | 657686 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi02g02944 | 670 | Pfam | PRA1 family protein | 509 | 648 | IPR004895 | - | |
Lsi02g02944 | 670 | Pfam | Cytochrome P450 | 43 | 443 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02944 | 670 | PANTHER | 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 | 20 | 449 | - | - | |
Lsi02g02944 | 670 | PRINTS | E-class P450 group I signature | 335 | 353 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02944 | 670 | PRINTS | E-class P450 group I signature | 403 | 413 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02944 | 670 | PRINTS | E-class P450 group I signature | 413 | 436 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02944 | 670 | PRINTS | E-class P450 group I signature | 75 | 94 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02944 | 670 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 406 | 415 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi02g02944 | 670 | PANTHER | CYTOCHROME P450 26 | 20 | 449 | - | - | |
Lsi02g02944 | 670 | SUPERFAMILY | Cytochrome P450 | 41 | 454 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi02g02944 | 670 | Gene3D | Cytochrome P450 | 36 | 461 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g00638 | Lsi-Chr1:5136644 | Lsi02g02944 | Lsi-Chr2:35584038 | 6.81E-09 | dispersed | |
Lsi02g02944 | Lsi-Chr2:35584038 | Lsi07g00205 | Lsi-Chr7:2230672 | 2.09E-85 | dispersed | |
Lsi05g00974 | Lsi-Chr5:16981086 | Lsi02g02944 | Lsi-Chr2:35584038 | 8.90E-37 | dispersed | |
Lsi07g00204 | Lsi-Chr7:2221600 | Lsi02g02944 | Lsi-Chr2:35584038 | 6.88E-29 | dispersed | |
Lsi11g00435 | Lsi-Chr11:4570193 | Lsi02g02944 | Lsi-Chr2:35584038 | 9.87E-42 | dispersed | |
Lsi09g01533 | Lsi-Chr9:23449532 | Lsi02g02944 | Lsi-Chr2:35584038 | 7.49E-50 | transposed | |
Lsi09g01780 | Lsi-Chr9:26553886 | Lsi02g02944 | Lsi-Chr2:35584038 | 3.31E-53 | transposed | |
Lsi02g02944 | Lsi-Chr2:35584038 | Lsi06g00271 | Lsi-Chr6:3061952 | 1.81E-40 | wgd | |
Lsi02g02944 | Lsi-Chr2:35584038 | Lsi07g00564 | Lsi-Chr7:5994952 | 2.76E-127 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi02g02944 | K12638 | - | csv:101217830 | 1135.55 |