Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lsi03g00155 | ATGCTGTTCATCGTGTGTGGACGAGTAAAACGTAGCCAAAGCCTGAGCAAGGGCATGACAGCAACAAGTTGGATTGAACCAGGAGGATTTCTTGGCGACGAGCTGCTATCGTGGTGTCTTCGGCGCCCGTTTCTAGAGAGACTTCCAGCTTCGTCAGCTACATTTGTTTGCATTGAACCAACAGAAGCATTTGCCCTGAAAGCAGACCATCTGAAGTACATAACCGATCACTTCCGATACAAATTCGCGAACGAGAGACTGAAGAGAACTGCAAGATATTACTCTTCCAACTGGAGAACATGGGCTGCTGTGAACATACAATTTGCTTGGCGTCGATACAGAAAGAGGATGAGACGTCCAGTGATAGCTGTGGTAGAAAATGGAAGCAATGAACGTAGGCTTTTGCAGTATGCTGCAATGTTCATGTCATTCAGGCCACACGACCATCTTGAATAG | 456 | 46.71 | MLFIVCGRVKRSQSLSKGMTATSWIEPGGFLGDELLSWCLRRPFLERLPASSATFVCIEPTEAFALKADHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRKRMRRPVIAVVENGSNERRLLQYAAMFMSFRPHDHLE | 151 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 2154484 | 2154939 | - | Lsi03G001550.1 | Lsi03g00155 | 657905 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lsi03g00155 | 151 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE | 1 | 151 | - | - | |
| Lsi03g00155 | 151 | Gene3D | Jelly Rolls | 1 | 80 | IPR014710 | - | |
| Lsi03g00155 | 151 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 1 | 151 | - | - | |
| Lsi03g00155 | 151 | SUPERFAMILY | cAMP-binding domain-like | 1 | 78 | IPR018490 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lsi03g00155 | Lsi-Chr3:2154484 | Lsi07g00120 | Lsi-Chr7:1352537 | 5.76E-54 | dispersed | |
| Lsi03g00155 | Lsi-Chr3:2154484 | Lsi09g00029 | Lsi-Chr9:279115 | 1.58E-21 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lsi03g00155 | K05391 | - | csv:101203560 | 305.064 |