Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi03g00155 ATGCTGTTCATCGTGTGTGGACGAGTAAAACGTAGCCAAAGCCTGAGCAAGGGCATGACAGCAACAAGTTGGATTGAACCAGGAGGATTTCTTGGCGACGAGCTGCTATCGTGGTGTCTTCGGCGCCCGTTTCTAGAGAGACTTCCAGCTTCGTCAGCTACATTTGTTTGCATTGAACCAACAGAAGCATTTGCCCTGAAAGCAGACCATCTGAAGTACATAACCGATCACTTCCGATACAAATTCGCGAACGAGAGACTGAAGAGAACTGCAAGATATTACTCTTCCAACTGGAGAACATGGGCTGCTGTGAACATACAATTTGCTTGGCGTCGATACAGAAAGAGGATGAGACGTCCAGTGATAGCTGTGGTAGAAAATGGAAGCAATGAACGTAGGCTTTTGCAGTATGCTGCAATGTTCATGTCATTCAGGCCACACGACCATCTTGAATAG 456 46.71 MLFIVCGRVKRSQSLSKGMTATSWIEPGGFLGDELLSWCLRRPFLERLPASSATFVCIEPTEAFALKADHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRKRMRRPVIAVVENGSNERRLLQYAAMFMSFRPHDHLE 151
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 2154484 2154939 - Lsi03G001550.1 Lsi03g00155 657905
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lsi03g00155 151 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 1 151 - -
Lsi03g00155 151 Gene3D Jelly Rolls 1 80 IPR014710 -
Lsi03g00155 151 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 151 - -
Lsi03g00155 151 SUPERFAMILY cAMP-binding domain-like 1 78 IPR018490 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g00155 Lsi-Chr3:2154484 Lsi07g00120 Lsi-Chr7:1352537 5.76E-54 dispersed
Lsi03g00155 Lsi-Chr3:2154484 Lsi09g00029 Lsi-Chr9:279115 1.58E-21 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi03g00155 K05391 - csv:101203560 305.064