Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi03g00307 ATGCCCTCAGAAATGACAAGTTATTATGATATTGATGACATTCTGGCAGAGGAAGAGCTTGTCTCAGTTGTGTTCCAAAAGGCAGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGGTCCAAAGTAGAGCTACCCTTCTGGCTTGCACAAGAGCTGCATCTTAGACAAGTGGCGGTAATGGGCTTACCTTCCTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTTCGATCTAGATGCCCATTCTTCTATGAATTTGGATGCAAGATTGCACCTCTGGTTGGCGATAGAACAATTGGTTCTTGGCTTTTATTGACGTTCAAGAGTAGGTACAAGGAAGTTCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATATTTGACACTTCTGTCAAAAGAAGAAACCAAAATGTATGAAGCAGCTCAATCCTCTATGTCAGCCTTCAAGAAATGGCGAATGGGTGGGCCTAGATTCCAGAAAGCATCCTTTCTAAGCAGGAAGAGGAAATCATCTGAGTAG 570 42.28 MPSEMTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMGLPSCFNQRTRLEIQADAAFVDLRSRCPFFYEFGCKIAPLVGDRTIGSWLLLTFKSRYKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMSAFKKWRMGGPRFQKASFLSRKRKSSE 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3730053 3736260 - Lsi03G003070.1 Lsi03g00307 658057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi03g00307 189 Pfam GINS complex protein 49 152 IPR021151 -
Lsi03g00307 189 SUPERFAMILY PriA/YqbF domain 3 70 - -
Lsi03g00307 189 Gene3D - 2 171 IPR038437 -
Lsi03g00307 189 SUPERFAMILY GINS helical bundle-like 69 170 IPR036224 -
Lsi03g00307 189 CDD GINS_A_psf3 69 171 - -
Lsi03g00307 189 PANTHER UNCHARACTERIZED 5 188 IPR010492 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi03g00307 K10734 - csv:101203869 354.755