Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi03g00392 | ATGTATAAACAGAGGAGAAGCTTTGCACTTTCTTCCAAACCACAAAACTTGACCATCTTCTCTTCTCTCTGTGTCCATTTCACTGCACCAATGGATGAAAATTCAAGCCTGGTCACAGAATCAACTCTCACAAACACCATGGAAGCAGAACCTCAAGAAGAAGAAAGAGACCCAGAAAGCAATCCCTTAAACCAACCCCTTCTCAAGAGAAGTAGAACTCTCTCTTCTAGTCCTCTTGCCATTGTTGGGGCAAAAGTTTCTCTCATTGAAAGCTTGGATTACGAGATCAATGAGAACGATCTGTTTAAGCACGATTGGAGAAGCAGATCCAGAGTTCAAGTGTTGCAGTACATATTCTCCAAATGGACACTGGCTTGTCTTGTTGGACTTCTTACAGGGATCATTGCCACTCTCATCAATCTTGCCATTGAAAATATTGCTGGCTACAAGCTCTTGAAAGTGGTCGGTTACATAAAGGAAGAAAGGTACTTAATGGGGTTCGCCTACTTTACCACTGCAAATTTCCTTCTGACTTTTGTTGCTGCTATTCTCTGTGTATGCTTTGCTCCCACCGCAGCTGGGCCTGGCATACCAGAAATCAAAGCTTATCTCAATGGTATAGACACTCCTAATATGTTTGGTGCCACGACGTTGATCGTTAAGGTGCGTATGCCACACACTTTCTTGTTGAATCTCAGCGCAACGAACACCGTCGATCAAATCAACTTTGGATTGTCATCACTGTGTATTGCCATATCCTCATTCGCTTTTGATTGA | 777 | 42.86 | MYKQRRSFALSSKPQNLTIFSSLCVHFTAPMDENSSLVTESTLTNTMEAEPQEEERDPESNPLNQPLLKRSRTLSSSPLAIVGAKVSLIESLDYEINENDLFKHDWRSRSRVQVLQYIFSKWTLACLVGLLTGIIATLINLAIENIAGYKLLKVVGYIKEERYLMGFAYFTTANFLLTFVAAILCVCFAPTAAGPGIPEIKAYLNGIDTPNMFGATTLIVKVRMPHTFLLNLSATNTVDQINFGLSSLCIAISSFAFD | 258 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4536068 | 4538097 | - | Lsi03G003920.1 | Lsi03g00392 | 658142 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi03g00392 | 258 | MobiDBLite | consensus disorder prediction | 45 | 66 | - | - | |
Lsi03g00392 | 258 | Gene3D | Clc chloride channel | 112 | 225 | - | - | |
Lsi03g00392 | 258 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 31 | 222 | - | - | |
Lsi03g00392 | 258 | PANTHER | CHLORIDE CHANNEL PROTEIN | 31 | 222 | - | - | |
Lsi03g00392 | 258 | SUPERFAMILY | Clc chloride channel | 99 | 222 | IPR014743 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi03g00392 | Lsi-Chr3:4536068 | Lsi05g00719 | Lsi-Chr5:9778960 | 9.83E-50 | dispersed | |
Lsi03g00392 | Lsi-Chr3:4536068 | Lsi11g00348 | Lsi-Chr11:3654966 | 1.33E-41 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi03g00392 | K05016 | - | csv:101210008 | 359.762 |