Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi03g00453 ATGAGGCGGCATCGTTTTCACACCCTGTTTAATCTGCCCACTATTTCAGAGCATTCTGTGAGTGAAAGCAGCCTATTAAATAGTATGAGTTCTTCATCAACTCAACTCTGTGCTTCAAGGATGGGCATCTATGAGCCATTTCACCAGATCAACTCATGGGCAAATGCATTTGGTAGTCGACTAGATACGAGCATATTGCCTATTATAAAAGAGGATGACTGTGTCGACAACAAACCTGAGTTTGTTCCTTTCGAATCGATGGATCATCTCGAGAGCAGTCAAGAAATGAACAAGCCAATCGACGATAAGGTACAAAGACGTTTAGCACAAAATCGGGAAGCAGCTCGTAAAAGCCGTATGAGGAAGAAGGTTTATGTGCAGCAGTTAGAAACTAGCCGTTTGAAGCTGGTACAGTTGGAGCAGGAGCTAGAAAGAACCAGGCAACAGAAGGGTACCAGCTGCTTAGTAGACACCAGCCACTTCGTATTCCGCAGATTGGTAAACCCAGGGATTGCTGCATTTGAGATGGAATACAATCACTGGGTTGAAGAGCAACAGAGACAGATCACCGAACTCAGAAACGCGTTGCAAGTTCATACAACTGAGATAGAACTCCAAATTTTAGTGGAGAGCAGCTTAAACCATTACCATAATCTGTTTGGCATGAAAGCCAATGCTGCAAAGGCTGATGTTTTCTATTTAATGTCTGGTGTTTGGAGAACATCGGCAGAGCGTTTTTTCCTCTGGATAGGAGGATTTCGGCCATCAGAACTGCTAAACGTTCTCAAGCCGTACTTTGAGCCATTAAATGAACAACAAAGAGCCGATATCCACAAGTTGCAACAGTCGTCTCGGCAAGCTGAAGATGCGCTCACACAGGGAATGGAAAAATTGCACCAGAATCTATCCCTCAGCATTGCCAGTGATCCTATAGGAAGCTATATTTCTCAGATGGGTGATGGAATTGAGAAACTACAAGCATTGGAGAGCTTCGTAAGCCAGAGGATCAAATCTCTAGCCCTTCCTCAAAACCCTCTGTGTGGAAAAATCAAACTGCTCAAGGAGCAATTGGCTTATGCTAATGACTTCTGGATGCAGCGCAAGGCTTGCTTGCTTTGGGCGAGTACTTCCACCGTCTCCGCGTTCTCAGTTCGCTCTGGGCCACTCGACCTCGTGAACCTGCCTAGCCATGAAAAGCTCAGACATGTTCCAGTCACCACCATAATATTCAATACCATAAGGCATAGACTACAAGGAATGTATGCTTCTGCCTCTTATTATAGTGGATGCCAAGCGACCACTCAATATTTCAATGAATCTTGCCTCCAAATTAGAGCTTTGGTGACCAAGTTGAAACCATTTCTATACTCATACAAACCATTTAGACCTTGCAAAAAACAAAATCTGCTTCTTGGAAATGAATCAAACTTGCAGATTTGGCATTTCAAAGAACAGCTGCTAAAAGAAGAAGAAATCAAATCGAAACACAAGGAAAACGATAGAGATCTTCTTGATCGTCGAATTCAGCACTGTGAAGATGCAGAGATCGTGGCAAGTCCTGCACTACCATCCTCTTCCTTTTCGAGCGCAGAGCTGCCGCTTACGGCGGACGGAAAGGTGTTGGAGCTCGACGAATCCAATTTCGATCTCGCCATTTCATCATTTGATTACATATTGGTCGACTTTTACGCCCCATGGTGCGGCCACTGCAAGCGTCTTTCTCCAGAGCGTATTAGAACTCTTAATTGTATATTTCGCCCATATAATTTGATTTCATTCCGGAATCCGGATGGCTGCAGCATCTCCAGATTTACTGTACTAGATGATAGATCCTTCTACTTCATGATCCGGCAAGAGGTGTATAAGAGCTGTCATTTGGTTCAATCTCATTTCCCGCAGTTTCTGTTGGATGCTGCTGCACCTCAGCTTGCCAAATTGAAGGAGCCTGTAGTTCTAGCAAAAGTGAATGCTGACAAGTTTACTAGTCTTGCTAAAAAATATGACGTTGAGTATGTCACTGACCCCGATTCATATCTCCAATATAATAAACTACGTCGTGCCTATCCTACAATCAAGATCTTCATGCACGGCGTCCCAATAGACTATTATGGACCAAGGAAAGCAGAGTTACTTGCCCGTTATCTGAAGAAATATGTTGCTCCAGATGTCTCAATTCTTGAGTCAGACTCATCAATTAATGAATTTGTTGAAGCTGCTGGGACTTTCTTCCCTATCTATTTGGGTTTTGGTTTAGATGAGTCTGTTATTTCTAAATTCGCGATTAAGTACAAGAAAAAGGCCTGGTTTTCAGTGGCAAAGGGTTTCTCAGAGGATATCATGGTGTCTTATGATTTTGATAAAGTTCCTGCTTTGGTTACTATCCATCCAAATTACAACAATGAGCGGAGCATCTTTTATGGTCCCTTTGAAGAACAATTCTTGGAGGAATTCATAAAACAAAGTCTGTTCCCTCTGGTTCTGCCCATAAACTACGACACTCTTAAGCTACTAAAAGATGACGAGAGGAAAATAGCACTCACAATTGTGGAGGATGAGGATAGTGACCAGACAAAGAATTTGATCAATTTATTAAAGGCTGCTGCATCTGCTAATCGTGACTTGGTGTTTGCTTACGTTGGGGCTAAACAGTGGGGAGAATTTTCTGATTCGTTTGGGGACAAGAAGACCACACTACCAAAAATGGTCATTTGGGACGGGGAGGACGACTACTTAATGTTTGAGTTGCCTCGATGTGAAGCTGGTTCCCTTCAGGAGAAAGCATCTGGAAATGTTACTGGTTCAGAAAGCATCATTGGGAACGATCATGCATCCGAAATCTCAAAATTTATTGAAAGATATAGGGAAGGGAGAACTGAAAAAAGAAGAGTTGCGGGTCCTGCATTTATTGGCTTCATAAACTCACTGATAGGCATCAGGACTGTATACATCATTGTAATTATTGTTGCAGGAATAATGCTTTACCAAAACCTCACCAAAGACGATAATGAATATCGCAGAATCGATACTCCTGCTCGGGACCAGGTCGAGCAAACTAGCAGTTCTACCTCACAGGTTGAAAGGACTGAATATAAGGCTGGTGACAAGGAAGATTGA 3114 42.84 MRRHRFHTLFNLPTISEHSVSESSLLNSMSSSSTQLCASRMGIYEPFHQINSWANAFGSRLDTSILPIIKEDDCVDNKPEFVPFESMDHLESSQEMNKPIDDKVQRRLAQNREAARKSRMRKKVYVQQLETSRLKLVQLEQELERTRQQKGTSCLVDTSHFVFRRLVNPGIAAFEMEYNHWVEEQQRQITELRNALQVHTTEIELQILVESSLNHYHNLFGMKANAAKADVFYLMSGVWRTSAERFFLWIGGFRPSELLNVLKPYFEPLNEQQRADIHKLQQSSRQAEDALTQGMEKLHQNLSLSIASDPIGSYISQMGDGIEKLQALESFVSQRIKSLALPQNPLCGKIKLLKEQLAYANDFWMQRKACLLWASTSTVSAFSVRSGPLDLVNLPSHEKLRHVPVTTIIFNTIRHRLQGMYASASYYSGCQATTQYFNESCLQIRALVTKLKPFLYSYKPFRPCKKQNLLLGNESNLQIWHFKEQLLKEEEIKSKHKENDRDLLDRRIQHCEDAEIVASPALPSSSFSSAELPLTADGKVLELDESNFDLAISSFDYILVDFYAPWCGHCKRLSPERIRTLNCIFRPYNLISFRNPDGCSISRFTVLDDRSFYFMIRQEVYKSCHLVQSHFPQFLLDAAAPQLAKLKEPVVLAKVNADKFTSLAKKYDVEYVTDPDSYLQYNKLRRAYPTIKIFMHGVPIDYYGPRKAELLARYLKKYVAPDVSILESDSSINEFVEAAGTFFPIYLGFGLDESVISKFAIKYKKKAWFSVAKGFSEDIMVSYDFDKVPALVTIHPNYNNERSIFYGPFEEQFLEEFIKQSLFPLVLPINYDTLKLLKDDERKIALTIVEDEDSDQTKNLINLLKAAASANRDLVFAYVGAKQWGEFSDSFGDKKTTLPKMVIWDGEDDYLMFELPRCEAGSLQEKASGNVTGSESIIGNDHASEISKFIERYREGRTEKRRVAGPAFIGFINSLIGIRTVYIIVIIVAGIMLYQNLTKDDNEYRRIDTPARDQVEQTSSSTSQVERTEYKAGDKED 1037
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5134947 5146527 + Lsi03G004530.1 Lsi03g00453 658203

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi03g00453 1037 Gene3D Glutaredoxin 528 730 - -
Lsi03g00453 1037 Gene3D - 102 154 - -
Lsi03g00453 1037 ProSiteProfiles DOG1 domain profile. 171 376 IPR025422 GO:0006351|GO:0043565
Lsi03g00453 1037 Pfam bZIP transcription factor 102 143 IPR004827 GO:0003700|GO:0006355
Lsi03g00453 1037 SUPERFAMILY Leucine zipper domain 103 147 IPR046347 GO:0003700|GO:0006355
Lsi03g00453 1037 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 101 145 IPR004827 GO:0003700|GO:0006355
Lsi03g00453 1037 CDD bZIP_HBP1b-like 103 149 - -
Lsi03g00453 1037 Pfam Thioredoxin-like domain 758 910 - -
Lsi03g00453 1037 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 106 121 IPR004827 GO:0003700|GO:0006355
Lsi03g00453 1037 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-2 636 1037 - -
Lsi03g00453 1037 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-2 527 576 - -
Lsi03g00453 1037 CDD PDI_a_family 541 715 - -
Lsi03g00453 1037 Gene3D Glutaredoxin 811 962 - -
Lsi03g00453 1037 SMART brlzneu 99 161 IPR004827 GO:0003700|GO:0006355
Lsi03g00453 1037 Coils Coil 270 290 - -
Lsi03g00453 1037 Coils Coil 182 202 - -
Lsi03g00453 1037 PANTHER PROTEIN DISULFIDE ISOMERASE 527 576 - -
Lsi03g00453 1037 PANTHER PROTEIN DISULFIDE ISOMERASE 636 1037 - -
Lsi03g00453 1037 Coils Coil 122 149 - -
Lsi03g00453 1037 Pfam Seed dormancy control 188 263 IPR025422 GO:0006351|GO:0043565
Lsi03g00453 1037 ProSiteProfiles Thioredoxin domain profile. 521 720 IPR013766 -
Lsi03g00453 1037 Pfam Thioredoxin 540 576 IPR013766 -
Lsi03g00453 1037 MobiDBLite consensus disorder prediction 1008 1037 - -
Lsi03g00453 1037 SUPERFAMILY Thioredoxin-like 541 718 IPR036249 -
Lsi03g00453 1037 MobiDBLite consensus disorder prediction 1013 1027 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi03g00453 K09580 PDIA1, P4HB; protein disulfide-isomerase A1 [EC:5.3.4.1] - csv:101217891 645.966
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g00453 Lsi-Chr3:5134947 Lsi04g00016 Lsi-Chr4:217909 1.11E-71 dispersed
Lsi08g00442 Lsi-Chr8:12044547 Lsi03g00453 Lsi-Chr3:5134947 6.98E-14 dispersed
Lsi10g01563 Lsi-Chr10:20043301 Lsi03g00453 Lsi-Chr3:5134947 1.24E-07 dispersed
Lsi03g00453 Lsi-Chr3:5134947 Lsi10g01166 Lsi-Chr10:15933908 6.92E-46 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi07g01159 . 1 219 bZIP Transcription Factor Family AT2G35530 61.4 2.8e-58 223.0
Lsi04g01023 . 10 359 bZIP Transcription Factor Family AT2G40620 54.7 4.0e-80 295.4
Lsi11g01151 . 395 519 bZIP Transcription Factor Family AT2G40620 70.4 6.4e-38 155.2
Lsi10g00496 CCT 1 233 bZIP Transcription Factor Family AT4G35040 63.0 1.5e-65 246.5
Lsi11g01199 CCT 1 232 bZIP Transcription Factor Family AT4G35040 63.4 1.9e-60 229.6
Lsi08g00928 . 616 935 bZIP Transcription Factor Family AT5G06950 78.1 1.8e-132 469.2
Lsi04g00016 . 54 384 bZIP Transcription Factor Family AT5G06950 76.4 8.9e-132 466.8
Lsi08g00395 . 136 467 bZIP Transcription Factor Family AT5G06950 69.6 9.6e-118 420.2
Lsi03g01615 . 137 470 bZIP Transcription Factor Family AT5G06950 67.7 9.6e-110 393.7
Lsi03g01716 . 221 514 bZIP Transcription Factor Family AT5G06950 60.8 6.9e-92 334.3
Lsi03g00453 . 100 334 bZIP Transcription Factor Family AT5G06950 51.8 9.5e-57 217.6
Lsi08g00928 . 642 935 bZIP Transcription Factor Family AT1G08320 61.0 1.6e-97 353.2
Lsi03g01716 . 198 514 bZIP Transcription Factor Family AT1G08320 59.0 1.5e-95 346.7
Lsi04g00016 . 97 384 bZIP Transcription Factor Family AT1G08320 60.1 3.4e-92 335.5
Lsi08g00395 . 177 467 bZIP Transcription Factor Family AT1G08320 59.1 3.1e-90 328.9
Lsi03g01615 . 178 470 bZIP Transcription Factor Family AT1G08320 55.3 1.4e-82 303.5
Lsi03g00118 . 165 349 bZIP Transcription Factor Family AT1G08320 52.9 9.9e-68 254.2
Lsi10g01166 . 123 325 bZIP Transcription Factor Family AT1G08320 57.1 1.9e-63 240.0
Lsi10g00496 CCT 1 267 bZIP Transcription Factor Family AT2G16770 59.7 4.5e-67 251.5
Lsi11g01199 CCT 1 263 bZIP Transcription Factor Family AT2G16770 57.6 4.3e-62 235.0
Lsi08g00928 . 637 935 bZIP Transcription Factor Family AT5G06960 79.0 1.2e-122 436.4
Lsi04g00016 . 74 384 bZIP Transcription Factor Family AT5G06960 74.3 1.4e-118 422.9
Lsi08g00395 . 162 467 bZIP Transcription Factor Family AT5G06960 67.6 1.8e-105 379.4
Lsi03g01615 . 156 470 bZIP Transcription Factor Family AT5G06960 64.4 2.3e-97 352.4
Lsi03g01716 . 207 514 bZIP Transcription Factor Family AT5G06960 60.1 3.6e-90 328.6
Lsi03g00453 . 91 334 bZIP Transcription Factor Family AT5G06960 50.8 9.5e-59 224.2
Lsi11g01151 . 1 517 bZIP Transcription Factor Family AT4G38900 59.1 3.3e-131 465.7
Lsi11g01149 . 1 536 bZIP Transcription Factor Family AT4G38900 56.4 1.4e-126 450.3
Lsi11g01151 . 64 545 bZIP Transcription Factor Family AT2G21230 53.0 7.0e-99 358.2
Lsi11g01421 . 1 248 bZIP Transcription Factor Family AT2G42380 57.1 3.5e-57 218.8
Lsi08g01479 CCT,ECH 6 353 bZIP Transcription Factor Family AT1G45249 53.8 7.3e-83 304.7
Lsi08g00928 . 616 935 bZIP Transcription Factor Family AT3G12250 78.8 1.2e-133 473.0
Lsi04g00016 . 54 384 bZIP Transcription Factor Family AT3G12250 75.8 2.9e-130 461.8
Lsi08g00395 . 136 467 bZIP Transcription Factor Family AT3G12250 68.7 1.1e-116 416.8
Lsi03g01615 . 137 470 bZIP Transcription Factor Family AT3G12250 68.4 6.7e-111 397.5
Lsi03g01716 . 221 514 bZIP Transcription Factor Family AT3G12250 60.1 7.7e-91 330.9
Lsi03g00453 . 91 334 bZIP Transcription Factor Family AT3G12250 50.4 6.5e-58 221.5
Lsi08g00395 . 16 467 bZIP Transcription Factor Family AT1G68640 62.3 4.1e-143 505.0
Lsi08g00928 . 606 935 bZIP Transcription Factor Family AT1G68640 64.2 2.2e-112 402.9
Lsi04g00016 . 51 384 bZIP Transcription Factor Family AT1G68640 64.4 3.5e-110 395.6
Lsi03g01615 . 135 470 bZIP Transcription Factor Family AT1G68640 60.5 1.5e-100 363.6
Lsi03g01716 . 209 514 bZIP Transcription Factor Family AT1G68640 55.5 7.0e-87 318.2
Lsi08g00550 . 8 341 bZIP Transcription Factor Family AT1G43700 50.7 1.4e-58 223.8
Lsi05g02094 . 11 416 bZIP Transcription Factor Family AT2G46270 50.6 1.6e-81 300.1
Lsi05g01348 . 42 373 bZIP Transcription Factor Family AT2G31370 70.0 4.4e-109 391.7
Lsi05g01346 . 1 359 bZIP Transcription Factor Family AT2G31370 62.4 2.1e-103 372.9
Lsi04g02035 . 1 250 bZIP Transcription Factor Family AT3G58120 51.6 4.8e-41 165.2
Lsi08g00619 . 17 321 bZIP Transcription Factor Family AT3G56850 56.8 1.2e-71 266.9
Lsi07g01159 . 37 219 bZIP Transcription Factor Family AT1G32150 61.7 7.2e-56 214.9
Lsi05g01348 . 10 368 bZIP Transcription Factor Family AT1G06070 68.5 7.7e-120 427.6
Lsi05g01346 . 1 357 bZIP Transcription Factor Family AT1G06070 68.2 7.7e-120 427.6
Lsi08g00550 . 145 342 bZIP Transcription Factor Family AT1G06070 54.9 3.3e-38 156.4
Lsi11g01151 . 383 527 bZIP Transcription Factor Family AT1G06070 63.9 9.6e-38 154.8
Lsi08g01479 CCT,ECH 6 353 bZIP Transcription Factor Family AT1G45249 53.8 7.3e-83 304.7
Lsi07g01159 . 1 219 bZIP Transcription Factor Family AT2G35530 61.4 2.8e-58 223.0
Lsi04g01023 . 10 359 bZIP Transcription Factor Family AT2G40620 54.7 4.0e-80 295.4
Lsi11g01151 . 395 519 bZIP Transcription Factor Family AT2G40620 70.4 6.4e-38 155.2
Lsi10g00496 CCT 1 233 bZIP Transcription Factor Family AT4G35040 63.0 1.5e-65 246.5
Lsi11g01199 CCT 1 232 bZIP Transcription Factor Family AT4G35040 63.4 1.9e-60 229.6
Lsi08g00928 . 616 935 bZIP Transcription Factor Family AT5G06950 78.1 1.8e-132 469.2
Lsi04g00016 . 54 384 bZIP Transcription Factor Family AT5G06950 76.4 8.9e-132 466.8
Lsi08g00395 . 136 467 bZIP Transcription Factor Family AT5G06950 69.6 9.6e-118 420.2
Lsi03g01615 . 137 470 bZIP Transcription Factor Family AT5G06950 67.7 9.6e-110 393.7
Lsi03g01716 . 221 514 bZIP Transcription Factor Family AT5G06950 60.8 6.9e-92 334.3
Lsi03g00453 . 100 334 bZIP Transcription Factor Family AT5G06950 51.8 9.5e-57 217.6
Lsi08g00928 . 642 935 bZIP Transcription Factor Family AT1G08320 61.0 1.6e-97 353.2
Lsi03g01716 . 198 514 bZIP Transcription Factor Family AT1G08320 59.0 1.5e-95 346.7
Lsi04g00016 . 97 384 bZIP Transcription Factor Family AT1G08320 60.1 3.4e-92 335.5
Lsi08g00395 . 177 467 bZIP Transcription Factor Family AT1G08320 59.1 3.1e-90 328.9
Lsi03g01615 . 178 470 bZIP Transcription Factor Family AT1G08320 55.3 1.4e-82 303.5
Lsi03g00118 . 165 349 bZIP Transcription Factor Family AT1G08320 52.9 9.9e-68 254.2
Lsi10g01166 . 123 325 bZIP Transcription Factor Family AT1G08320 57.1 1.9e-63 240.0
Lsi10g00496 CCT 1 267 bZIP Transcription Factor Family AT2G16770 59.7 4.5e-67 251.5
Lsi11g01199 CCT 1 263 bZIP Transcription Factor Family AT2G16770 57.6 4.3e-62 235.0
Lsi08g00928 . 637 935 bZIP Transcription Factor Family AT5G06960 79.0 1.2e-122 436.4
Lsi04g00016 . 74 384 bZIP Transcription Factor Family AT5G06960 74.3 1.4e-118 422.9
Lsi08g00395 . 162 467 bZIP Transcription Factor Family AT5G06960 67.6 1.8e-105 379.4
Lsi03g01615 . 156 470 bZIP Transcription Factor Family AT5G06960 64.4 2.3e-97 352.4
Lsi03g01716 . 207 514 bZIP Transcription Factor Family AT5G06960 60.1 3.6e-90 328.6
Lsi03g00453 . 91 334 bZIP Transcription Factor Family AT5G06960 50.8 9.5e-59 224.2
Lsi11g01151 . 1 517 bZIP Transcription Factor Family AT4G38900 59.1 3.3e-131 465.7
Lsi11g01149 . 1 536 bZIP Transcription Factor Family AT4G38900 56.4 1.4e-126 450.3
Lsi11g01151 . 64 545 bZIP Transcription Factor Family AT2G21230 53.0 7.0e-99 358.2
Lsi11g01421 . 1 248 bZIP Transcription Factor Family AT2G42380 57.1 3.5e-57 218.8
Lsi08g00928 . 616 935 bZIP Transcription Factor Family AT3G12250 78.8 1.2e-133 473.0
Lsi04g00016 . 54 384 bZIP Transcription Factor Family AT3G12250 75.8 2.9e-130 461.8
Lsi08g00395 . 136 467 bZIP Transcription Factor Family AT3G12250 68.7 1.1e-116 416.8
Lsi03g01615 . 137 470 bZIP Transcription Factor Family AT3G12250 68.4 6.7e-111 397.5
Lsi03g01716 . 221 514 bZIP Transcription Factor Family AT3G12250 60.1 7.7e-91 330.9
Lsi03g00453 . 91 334 bZIP Transcription Factor Family AT3G12250 50.4 6.5e-58 221.5
Lsi08g00395 . 16 467 bZIP Transcription Factor Family AT1G68640 62.3 4.1e-143 505.0
Lsi08g00928 . 606 935 bZIP Transcription Factor Family AT1G68640 64.2 2.2e-112 402.9
Lsi04g00016 . 51 384 bZIP Transcription Factor Family AT1G68640 64.4 3.5e-110 395.6
Lsi03g01615 . 135 470 bZIP Transcription Factor Family AT1G68640 60.5 1.5e-100 363.6
Lsi03g01716 . 209 514 bZIP Transcription Factor Family AT1G68640 55.5 7.0e-87 318.2
Lsi08g00550 . 8 341 bZIP Transcription Factor Family AT1G43700 50.7 1.4e-58 223.8
Lsi05g02094 . 11 416 bZIP Transcription Factor Family AT2G46270 50.6 1.6e-81 300.1
Lsi05g01348 . 42 373 bZIP Transcription Factor Family AT2G31370 70.0 4.4e-109 391.7
Lsi05g01346 . 1 359 bZIP Transcription Factor Family AT2G31370 62.4 2.1e-103 372.9
Lsi04g02035 . 1 250 bZIP Transcription Factor Family AT3G58120 51.6 4.8e-41 165.2
Lsi08g00619 . 17 321 bZIP Transcription Factor Family AT3G56850 56.8 1.2e-71 266.9
Lsi07g01159 . 37 219 bZIP Transcription Factor Family AT1G32150 61.7 7.2e-56 214.9
Lsi05g01348 . 10 368 bZIP Transcription Factor Family AT1G06070 68.5 7.7e-120 427.6
Lsi05g01346 . 1 357 bZIP Transcription Factor Family AT1G06070 68.2 7.7e-120 427.6
Lsi08g00550 . 145 342 bZIP Transcription Factor Family AT1G06070 54.9 3.3e-38 156.4
Lsi11g01151 . 383 527 bZIP Transcription Factor Family AT1G06070 63.9 9.6e-38 154.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006012 2 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 1 38
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24971 PF13848 Thioredoxin_6 1.90E-12 CL0172 Lsi TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi03g00453 Lsi_Chr03 FPKM 0.0 0.0 0.218797 0.352692 0.0 0.0 0.148714 0.835635 0.959128 1.13245