Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi03g00761 ATGGCTGACACAGCTTATATTCATGCAGATATCGAGCAGTTATTGATAGAAGCAAAACATCGTTGGTTACGTCCAGCTGAAATTTGTGAAATACTCCGTAACTATCCTAAGTTTCATATTGCTTCAGAGCCTCCAGATAGACCATCAAGTGGGTCACTTTTTCTTTTTGATCGTAAGGTTCTGAGGTACTTTAGAAAGGATGGACATAAATGGAGGAAGAAGAAAGATGGCAAAACTGTAAGGGAAGCTCATGAGAAGCTGAAGGTTGGAAGCATTGATGTATTGCACTGCTATTATGCCCATGGAGAAGAAAATGAGAACTTTCAAAGGCGCAGTTATTGGATGCTTGAAGAGCATTTAATGCACATAGTTTTTGTCCACTACTTGGAAGTTAAGGTAATCTATGCCCTGTTCACTGGGCTAGGTGAGTCCCATGGTTGCTTATGTTATTTGGTTCCACCAAGCTTTGAGGCACACGGGGATGAAGGCAATAGAACCAGTATTGGAGCTGTCGTTGAGACAGATGAGGTTTCATCAAGTTCACAGAAGAGCAGCTCTAGGAGTTCTAGCTATTCCAGCAGTCATAATCAAGCAGCTTCTGAAAATGCAGATTCCCCCAGTCCAACTAGCACTTTGACATCATTTTGTGAAGATGCTGATACTGGTATTCTCATTCTCCTTGGCTTCACCGAAGTTTTTACTCTACATTCATTATGGAGGTTGCTAATGAAGTTTTTACTCTGCATTTATTATGGAGGTTGCTACTTGAATTTGCAATTTTGTGCAGAAGACACTTACCAAGCAACTTCAAGATTTCACTCATTTCCCACATCGCCAAAAATGGGAAATGGTCCTCTGGTGAATAAACAAGATGCTGGTCAATCAAATTTTTATTTTCCGCATCCCTCTTCCAACAATGTTGAAGCTTGGTCATCAGTTCCTGCTGTGGATTATGTAACACAAGTTCAGAAAGATGGACTTGGGGGTAACGTTGGTGATACTGGTGTGATGGGTTCTCAGAAGACACTCAGTTCTGCCTCGTGGGAAGAGATCTTGCAACAATGTACAACTGGATTTCAAACCGTACCTTCTCATGTTTTAACCTCTTCAATTGAACCTCTGTCCTCTGGAATTGTCCTTGGACAAGAGAATTCAATTTATGGCAAGCAGTTAACCAGTAATAGTGCTATTAAAGAGGACTTTGGGAGTACTCTGACAATGACATCAAACTGGCAGGCTTCAAAGTCCTCCCAAGAAAACTTGGGTTGTGTTGAGCTACTGAATATGACTGTACATGTACATGCACACATGCACACTGATACACACATATAA 1332 41.14 MADTAYIHADIEQLLIEAKHRWLRPAEICEILRNYPKFHIASEPPDRPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVREAHEKLKVGSIDVLHCYYAHGEENENFQRRSYWMLEEHLMHIVFVHYLEVKVIYALFTGLGESHGCLCYLVPPSFEAHGDEGNRTSIGAVVETDEVSSSSQKSSSRSSSYSSSHNQAASENADSPSPTSTLTSFCEDADTGILILLGFTEVFTLHSLWRLLMKFLLCIYYGGCYLNLQFCAEDTYQATSRFHSFPTSPKMGNGPLVNKQDAGQSNFYFPHPSSNNVEAWSSVPAVDYVTQVQKDGLGGNVGDTGVMGSQKTLSSASWEEILQQCTTGFQTVPSHVLTSSIEPLSSGIVLGQENSIYGKQLTSNSAIKEDFGSTLTMTSNWQASKSSQENLGCVELLNMTVHVHAHMHTDTHI 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10528298 10534413 - Lsi03G007610.1 Lsi03g00761 658511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi03g00761 443 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 7 134 - -
Lsi03g00761 443 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 164 221 - -
Lsi03g00761 443 Pfam CG-1 domain 17 130 IPR005559 GO:0003677
Lsi03g00761 443 ProSiteProfiles CG-1 DNA-binding domain profile. 11 137 IPR005559 GO:0003677
Lsi03g00761 443 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 262 415 - -
Lsi03g00761 443 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 7 134 - -
Lsi03g00761 443 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 262 415 - -
Lsi03g00761 443 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 164 221 - -
Lsi03g00761 443 SMART CG_1_2 14 132 IPR005559 GO:0003677
Lsi03g00761 443 MobiDBLite consensus disorder prediction 172 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g00761 Lsi-Chr3:10528298 Lsi09g01722 Lsi-Chr9:25791157 5.88E-48 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi03g00761 K21596 - csv:101203707 588.956