Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lsi03g00967 | ATGGCTGGTCAATCAGATCCTCACGTGAACCTATTTTCTGCAGAAGAGGTCGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTGTTCCTAATATGAGAATGGATTCTCTGCATTTGATCTGTGGGGATTATGGTCCATTCTATCCCCAAATAGCAACTGAAGTTCCATTGTGGCTAGCGATTGCTTTGAAAAAAAGAGGGAAATGTGCAATTAGGACTCCAGAGTGGATGTCAGTAGAAAAGTTGACACAAATTTTGGAGGCAGAACGAGAGTCTCAAGGATCTTTCCAGATACTACCCTTCCATTACGTGGAAATATCAAAACTTCTTTTTGACCACGCACGAGATGACGTTCCTGACATGTATTTGGTGAGGTCTCTTATTGAAGATATCAGGGATGTTAGGTTTCACAAAGTTGAAACCAGCTTGGAGTCAATTGATACACGCACATCTGCAGTGAAGATTCGTGGAGAAAATCAGAAATACAATATTCAAATTTGTTCGGAA | 507 | 40.63 | MAGQSDPHVNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVEKLTQILEAERESQGSFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIRGENQKYNIQICSE | 169 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 18775942 | 18785317 | - | Lsi03G009670.1 | Lsi03g00967 | 658717 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lsi03g00967 | 169 | PANTHER | DNA REPLICATION COMPLEX GINS PROTEIN PSF2 | 1 | 156 | IPR007257 | GO:0005634|GO:0006260 | |
| Lsi03g00967 | 169 | SUPERFAMILY | GINS helical bundle-like | 74 | 153 | IPR036224 | - | |
| Lsi03g00967 | 169 | Pfam | GINS complex protein | 53 | 150 | IPR021151 | - | |
| Lsi03g00967 | 169 | PIRSF | GINS_PSF2 | 2 | 158 | IPR007257 | GO:0005634|GO:0006260 | |
| Lsi03g00967 | 169 | CDD | GINS_A_psf2 | 66 | 157 | - | - | |
| Lsi03g00967 | 169 | SUPERFAMILY | PriA/YqbF domain | 12 | 71 | - | - | |
| Lsi03g00967 | 169 | Gene3D | - | 78 | 160 | - | - | |
| Lsi03g00967 | 169 | Gene3D | - | 12 | 77 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lsi03g00967 | K10733 | - | csv:101212053 | 310.457 |