Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi03g01151 ATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGCTGTTCCTTTGAATGCACCTACCGAGCTCTCATCCTCGGTTCGTAGCAATGGTAGAGTCTCAATGAGGAGATCTGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTATGGTCCCGACCGTGTCAAGTACCTTGGACCATTCTCCGGTGAGCCTCCATCTTACCTCACAGGGGAATTCCCTGGTGATTATGGTTGGGACACTGCAGGTCTATCTGCCGATCCCGAGACCTTTGCCAAGAACCGAGAACTCGAAGTGATTCACAGTAGATGGGCTATGCTTGGGGCTCTAGGATGTGTATTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAGATCTTCAGTGAAGGTGGCCTAGACTATCTTGGAAACCCAAGTCTAATTCATGCACAGAGCATTTTGGCCATTTGGGCATCTCAAGTAGTGCTTATGGGTGCAGTTGAAGGTTATCGTATTGCCGGAGGACCACTCGGAGAAGTTACCGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTCGGGTTGGCTGATGATCCAGATGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCAATGTTTTCTATGTTCGGGTTTTTCGTACAGGCCATTGTAACAGGAAAGGGTCCTTTGGAGAACCTCGCAGATCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGGAAGTGA 798 49.0 MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 21810160 21810957 - Lsi03G011510.1 Lsi03g01151 658901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi03g01151 265 MobiDBLite consensus disorder prediction 21 47 - -
Lsi03g01151 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Lsi03g01151 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Lsi03g01151 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 2 265 - -
Lsi03g01151 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 265 IPR001344 GO:0009765|GO:0016020
Lsi03g01151 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g01151 Lsi-Chr3:21810160 Lsi10g01537 Lsi-Chr10:19772142 1.49E-171 dispersed
Lsi03g01151 Lsi-Chr3:21810160 Lsi01g00172 Lsi-Chr1:1668479 6.24E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi03g01151 K08912 - csv:101203342 529.635