Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi03g01466 ATGGACGCCATTGCTACCTTGGCAGTTGCTCAGAATATGCGGGAACTTTATAGATTGGTGCTTGTTGACACCCCCTTGGCTCCATACTTCTCAGAGTGTATCACTTCTGAGGATTTGGATGACATGAACATAGAGATCATGAGGAACACTCTCTACAAGGCATACCTAGAGGATTTCTACAGGTTCTGTCAGAAACTGGGTGGTGCCACTGCTGAGATCATGTCTGACCTCCTTGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTACCATAAATAGTTATCCCTATGGTCATGAGGAACTTGCAATCTGTGAGGATATTGATCAGGTTCGTGGTGCCATGGAAAAATACCCTCCCTACCAGTCAATTTTTTCCAAGCTATCATATGGAGAGAGTCAGATGCTTGACAAGGCATTCTATGAAGAGGAGGTGAAAAGGCTATGCTTGGCATTTGAGCAACAGTTCCATTATGGTGTTTTCTTTGCATACATGAGGTTGAGGGAACAGGAGATTAGGAACCTAATGTGGATATCAGAGTGCGTGGCTCAGAACCAGAAGTCGAGGGTTCACGACAGCGTTGTCTTCATATTTTAG 594 44.44 MDAIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSYPYGHEELAICEDIDQVRGAMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25521596 25525356 - Lsi03G014660.1 Lsi03g01466 659216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi03g01466 197 Pfam ATP synthase (C/AC39) subunit 4 190 IPR002843 GO:0046961
Lsi03g01466 197 PANTHER V-TYPE PROTON ATPASE SUBUNIT 1 93 - -
Lsi03g01466 197 PANTHER V-TYPE PROTON ATPASE SUBUNIT 94 197 - -
Lsi03g01466 197 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 93 IPR016727 GO:0033179|GO:0046961|GO:1902600
Lsi03g01466 197 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 94 197 IPR016727 GO:0033179|GO:0046961|GO:1902600
Lsi03g01466 197 SUPERFAMILY V-type ATP synthase subunit C 2 195 IPR036079 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi03g01466 K02146 - csv:101203260 383.645