Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi03g01491 | ATGATATTCCCATCTTCTTTTCCCTTTAGAAGAAGAAAGGGAGGTGGGCTCGCCTCTCTCGAGGGACCTAAATGGGCTAAACACACAAAGATCATCAACCCTGCATTTCACACGGAGAAGTTGAAGGAAATGTTTCCAGCATTCTCCCAGAGTTGTACGGAAATGGTTAATAAATGGGAAATGATGGTTCCTGCTGAAGAAGGATGTTGTGAAATTGATGTGTGGCCTGATGTGCAAAACATGGCTGCAGATGTGATTTCTAGAACTGCATTTGGAAGTAATTTTGAGGAAGGAAAAAAGATCTTCCAGCTCTTGAAAGAGTCGGCTTCGCTGTTCATGACATACCTAACAAATAGAGTTTATTTCATTCCAGGGTTTAGGTATATACCAACTAAATTGAACAAGAGGATGAAAGAGATTGATAGAAAAATACAAGATATGATCTGGGGTATTATAAGCAAAAGACAAAATGATATGAAGAAAGGTGAAGCTTCCAATAATGAAGATCTATTAGGCATCCTTTTAGAATCAAATGCAAGTCAAATTGAAGAACAAACAAACAAGAAAGAAGTTGGAATGAGCATAGAAGAAGTAATAAATGAATGCAGGCTTTTCTATTTTGCTGGCCAAGAAACCACAGCTGCAATGTTTGTTTGGACAATGGTTCTACTTGGTCGATACTCAGAGTGGCAAGATCGAGCAAGAGCAGAAGTCTTGGAGGTTTTTGGTTATAACAACAAATTGGATTTTGTTGGTCTAAGTCGTCAAAGAGTAAGTATGATACTAAATGAAGTTCTTAGGCTATACCCTCCAGCTGGAATGCTAGTTCGAGATATTCACAATGAAACACAATTGGAAAATTTGACATTACCAGTTGGAGTATCAATAGGAATACCAATTTTATGCATACACCAAGATCCCAAAATATGGGGTGAAGATGCAAGTGAGTTCAAACTAGAAAGATTTTCAGAAGGAATTTCTAAAGTAACAAAGAATCAAGTATGCTCTATCCCTTTTGGATGGGGTCCTCGAATTTGTGTTGGTCAAAACTTTGCAATGATTGAAGCCAAAATAGCATTATCCATGATTTTGCAACAATTCTCATTTACACTTTCTCCAACTTATACTCATGCTCCTATCTCAAACATTACTATTCAGCCACAACATGGGGCTCATCTCATCTTTCGTAAGCTATAA | 1197 | 37.51 | MIFPSSFPFRRRKGGGLASLEGPKWAKHTKIINPAFHTEKLKEMFPAFSQSCTEMVNKWEMMVPAEEGCCEIDVWPDVQNMAADVISRTAFGSNFEEGKKIFQLLKESASLFMTYLTNRVYFIPGFRYIPTKLNKRMKEIDRKIQDMIWGIISKRQNDMKKGEASNNEDLLGILLESNASQIEEQTNKKEVGMSIEEVINECRLFYFAGQETTAAMFVWTMVLLGRYSEWQDRARAEVLEVFGYNNKLDFVGLSRQRVSMILNEVLRLYPPAGMLVRDIHNETQLENLTLPVGVSIGIPILCIHQDPKIWGEDASEFKLERFSEGISKVTKNQVCSIPFGWGPRICVGQNFAMIEAKIALSMILQQFSFTLSPTYTHAPISNITIQPQHGAHLIFRKL | 398 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 25937322 | 25939880 | + | Lsi03G014910.1 | Lsi03g01491 | 659241 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi03g01491 | 398 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 10 | 389 | - | - | |
Lsi03g01491 | 398 | Gene3D | Cytochrome P450 | 2 | 398 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01491 | 398 | PRINTS | E-class P450 group I signature | 81 | 99 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01491 | 398 | PRINTS | E-class P450 group I signature | 197 | 214 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01491 | 398 | PRINTS | E-class P450 group I signature | 346 | 369 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01491 | 398 | PRINTS | E-class P450 group I signature | 217 | 243 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01491 | 398 | PRINTS | E-class P450 group I signature | 336 | 346 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01491 | 398 | PRINTS | E-class P450 group I signature | 259 | 277 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01491 | 398 | Pfam | Cytochrome P450 | 11 | 382 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01491 | 398 | PANTHER | CYTOCHROME P450 72A11-RELATED | 10 | 389 | - | - | |
Lsi03g01491 | 398 | SUPERFAMILY | Cytochrome P450 | 9 | 396 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01491 | 398 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 339 | 348 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi03g01491 | 398 | PRINTS | P450 superfamily signature | 260 | 271 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01491 | 398 | PRINTS | P450 superfamily signature | 208 | 225 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01491 | 398 | PRINTS | P450 superfamily signature | 346 | 357 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01491 | 398 | PRINTS | P450 superfamily signature | 337 | 346 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi03g01491 | Lsi-Chr3:25937322 | Lsi04g01957 | Lsi-Chr4:26673143 | 3.91E-176 | dispersed | |
Lsi03g01489 | Lsi-Chr3:25926767 | Lsi03g01491 | Lsi-Chr3:25937322 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi03g01491 | - | - | csv:101207867 | 649.047 |