Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi03g01628 | ATGGTTCTCTCTCTCATCCTTCTCTCTCTCCTCCTCCTTCTCCTTGCCTACAACCTCTACAACCGCCTCCGGTTCAAGCTCCCACCAGGGCCACGGCCGCTTCCGGTGGTCGGAAACCTGTACGACGTCAAACCTGTCCGGTTCAGATGCTATGCGGAATGGGCCAAGCAGTACGGTCCGATCATATCGGTGTGGTTCGGGTCGACGCTGAACGTGGTGGTGTCGAACACGGAACTGGCGAGGGAGGTTCTGAAGGAGCACGACCAGAGCCTAGCGGACCGGCACCGGAGTCGATCGGCGGCGAAATTTAGCCGGGACGGGAAGGACCTGATTTGGGCGGATTATGGACCTCATTATGTGAAGGTGAGGAAAGTTTGTACAATCGAACTGTTCTCTCCGAAACGACTTGAATCTCTGAGGCCGATTAGAGAAGATGAAGTTTCCGCCATGGTTGAAGACGTTTTCAATCACTGCACTAATTCTGAGAACCATGGAAAGAGCTTGAAGCTGAGGGAGTTTCTGGGAGCAGTTTCATTCAACAACATCACAAGGCTCGCATTTGGGAAGAGATTTGTGAATTCCGATGGCGTTTTGGATGAACAGGGCTTGGAATTCAAGGCCATTGTCGCCAATGGCCTCAAGCTTGGCGCCTCCTTGGCCATGGCCGAGCACATCCCTTGGCTCCGCTGGATGTTCCCTCTCGAAGAAGAAGCCTTCGCCAAGCACGGCGCCCGTCGCGACCGCCTCACTCGAGCCATCATGGAAGAGCACACCAAAGCTCGCAACCTGAGCGGCAATGTCAAGAACCACTTCGTCGATGCTCTCCTCACTCTCAAAGACAAGTACGATCTCAGTGAAGACACCATCATTGGCCTCCTTTGGGATATGATCACAGCCGGCATGGACACGACAGCGATTTCAGTGGAATGGGCGATGGCGGAGATCGTAAGAAACCCTAGAGTGCAAAAGAAAGTTCAGGAGGAATTAGACAATGCGATTGGAGTAGATCGGATCATGACAGAGAGCGACTTCTCAAATCTTCCATATCTCCAATGCGTCGTAAAAGAGGCGATGAGATTACATCCACCGACGCCATTGATGCTGCCGCACCGATCCAACGCCAACGTGAAGATCAGCGGCTACGACATCCCCAAGGGCTCGAACGTGCACGTGAACGTATGGGCGGTGGCACGTGACCCGGCAGTGTGGAAGAACGCGGAGGAATTCCGGCCTGAGCGGTTCTTAGAAGAGGATGTGGACATGAAAGGGCACGATCTGCGATTGCTGCCGTTCGGAGCAGGGCGGAGGGTGTGCCCAGGGGCTCAATTGGGAATTAATTTGGTGACGTCAATGTTGGGGCACCTTCTGCACCACTTCGAATGGACGCCGCCGCCGGGGATGAAGGCGGAGGAGATCGACATGTCGGAGAGCCCTGGATTGGTGTCGTATATGAAGACGCCGGTGCAGGCTGTGGCCACTCCCAGGCTGCCTTCAGGACTGTACAAACGTGTGCCTGTGGACATGTAA | 1527 | 54.68 | MVLSLILLSLLLLLLAYNLYNRLRFKLPPGPRPLPVVGNLYDVKPVRFRCYAEWAKQYGPIISVWFGSTLNVVVSNTELAREVLKEHDQSLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTIELFSPKRLESLRPIREDEVSAMVEDVFNHCTNSENHGKSLKLREFLGAVSFNNITRLAFGKRFVNSDGVLDEQGLEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMEEHTKARNLSGNVKNHFVDALLTLKDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAEIVRNPRVQKKVQEELDNAIGVDRIMTESDFSNLPYLQCVVKEAMRLHPPTPLMLPHRSNANVKISGYDIPKGSNVHVNVWAVARDPAVWKNAEEFRPERFLEEDVDMKGHDLRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFEWTPPPGMKAEEIDMSESPGLVSYMKTPVQAVATPRLPSGLYKRVPVDM | 508 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 27403667 | 27408264 | - | Lsi03G016280.1 | Lsi03g01628 | 659378 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi03g01628 | 508 | Pfam | Cytochrome P450 | 28 | 479 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 431 | 440 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi03g01628 | 508 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 5 | 501 | - | - | |
Lsi03g01628 | 508 | Gene3D | Cytochrome P450 | 21 | 498 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | PANTHER | CYTOCHROME P450 98A3 | 5 | 501 | - | - | |
Lsi03g01628 | 508 | PRINTS | E-class P450 group I signature | 177 | 195 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | PRINTS | E-class P450 group I signature | 308 | 334 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | PRINTS | E-class P450 group I signature | 55 | 74 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | PRINTS | E-class P450 group I signature | 79 | 100 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | PRINTS | E-class P450 group I signature | 351 | 369 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | PRINTS | E-class P450 group I signature | 438 | 461 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | PRINTS | E-class P450 group I signature | 288 | 305 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | PRINTS | E-class P450 group I signature | 392 | 416 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | PRINTS | E-class P450 group I signature | 428 | 438 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | PRINTS | P450 superfamily signature | 429 | 438 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | PRINTS | P450 superfamily signature | 299 | 316 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | PRINTS | P450 superfamily signature | 352 | 363 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01628 | 508 | SUPERFAMILY | Cytochrome P450 | 28 | 495 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi03g01628 | Lsi-Chr3:27403667 | Lsi07g00668 | Lsi-Chr7:7169224 | 5.82E-122 | dispersed | |
Lsi04g01601 | Lsi-Chr4:23538165 | Lsi03g01628 | Lsi-Chr3:27403667 | 4.81E-45 | dispersed | |
Lsi10g00681 | Lsi-Chr10:9538744 | Lsi03g01628 | Lsi-Chr3:27403667 | 7.59E-90 | dispersed | |
Lsi11g00816 | Lsi-Chr11:10072961 | Lsi03g01628 | Lsi-Chr3:27403667 | 1.59E-77 | dispersed | |
Lsi11g00817 | Lsi-Chr11:10082791 | Lsi03g01628 | Lsi-Chr3:27403667 | 4.52E-77 | dispersed | |
Lsi03g01627 | Lsi-Chr3:27392516 | Lsi03g01628 | Lsi-Chr3:27403667 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi03g01628 | K09754 | - | csv:101217257 | 917.531 |