Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi03g01631 ATGGATATCTCTATTCCAACGATTTTGTTCCTCACTTTCCTCATCTCTCTTTTCTTTTACCTTTACTTCTTAATTTCAACTAAGAAATCTCGAAGCCATGAAGGTTTTAGAAACTACCCCATCGTCGGAGTCTTGCCCCTGTTCTTATTGAACCGCCACCGTTTTTTAGACTGGACGACGGAGGTCCTCCGCAACTGCAAGACGAACACGGCGGTGTTCCGGCGGCCAGGGGACATTTGCGGTGTCATGACGGCAAACCCACTTGTGGTGGAGCACATTCTGAAGACCCAATTTGAGAATTACCCAAAAGGGGAACGTCTCATTTCGATTTTGGAGGATTTTTTGGGGAGTGGGATTTTCAATTCCGACGGCGAAATTTGGAGATTTCAAAGGAAAATGGCGAGTTATGAGTTCAATACGAAATCGCTGAGGAATTTCGTGATGGAGAATGTTAAATTTGAGATACAGAGGAAACTGATTCCTGTTTTGGAGAAGGCGGCTTCGTCGTCTGAAACAGAGTTTGTTTTGGATTTGCAGGATGTTTTGGAGCGATTCGCGTTTGATAATGTTTGTAAATTGTCTTTCAATTTTGACTCTGGTTGTCTCGGCGGCGAGGATAATGCCGGCGACGAGTTCATGCGCGCTTTTGAGAACGCCGCCACCCTCACATCCGGCAGGTTCCCTTCATTTCTCTGA 696 45.69 MDISIPTILFLTFLISLFFYLYFLISTKKSRSHEGFRNYPIVGVLPLFLLNRHRFLDWTTEVLRNCKTNTAVFRRPGDICGVMTANPLVVEHILKTQFENYPKGERLISILEDFLGSGIFNSDGEIWRFQRKMASYEFNTKSLRNFVMENVKFEIQRKLIPVLEKAASSSETEFVLDLQDVLERFAFDNVCKLSFNFDSGCLGGEDNAGDEFMRAFENAATLTSGRFPSFL 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27451203 27451898 + Lsi03G016310.1 Lsi03g01631 659381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi03g01631 231 PANTHER BNAC06G16010D PROTEIN 9 229 - -
Lsi03g01631 231 Gene3D Cytochrome P450 18 231 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi03g01631 231 SUPERFAMILY Cytochrome P450 26 227 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi03g01631 231 Pfam Cytochrome P450 77 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi03g01631 231 PANTHER CYTOCHROME P450 9 229 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g01631 Lsi-Chr3:27451203 Lsi06g01637 Lsi-Chr6:26666402 9.30E-50 dispersed
Lsi03g01631 Lsi-Chr3:27451203 Lsi03g01632 Lsi-Chr3:27454110 1.36E-112 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi03g01631 - - cmax:111482283 328.176