Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi03g01713 | ATGGCTGATTTCCCAGACTACCTTCTTCTTCTCTCTCTCTTGTTAATTTCATTTCTCTTCATTCAACTCATCTTCACCCGAAACCAACCCGACAAGCTTCGTCGTCCACCGAGCCCTCCGTCGTGGCCAGTGGTTGGCCACCTTCACCTCCTTGGTAGAATACCTCACCAAGCTCTTCACAAATTGTCATGTCAATATGGACCATTAATACATCTCTTCTTTGGCTCTAAGCCTTGTGTTATTGTCTCCAATTCAGAAATGGCTAAACAATTCCTCAAAATTAATGAATCCTCCTTTCTTAACCGACCCATTAGGCTCAACATAAACTATCTTACTTATGGCTCTGCAGACTTCACTTTTGCACCCTATGGACCCTATTGGAAGTTCTTGAAAAAGTTGTGCATGACCGAGCTCCTCGGTGGCCGGACCCTCGACCTCCACCGCCCCATAAGGGACGAGGAAATGAAGTTGTTTGTGCAAAGGATTCATGAACAAGCTACCGTAGGGAAGATGGTTGATGTTGGAGTTGACCTTTCAAGGTTGATGAACAACATAATATCGAGGATGGCATTGAGGAGACGATGCTCGGAGAAGGAAGATGGATCAGAAGAGGTCGGGAAGTTGGTGGGAGAGATGTGCGAGCTCGCCGGAGAACTTAACATCGCGGATATGATTTGGTTTTGTAAGAGATTGGATGTACAAGGGTTTGGAAGAAGAGTTAGAGATGTGAGAAGGAGGTATGATATAATGATGGAGAAGATAATAAAAGAGCATGAAGAAGAGAGGAAGAGGAAGAAAGAAGATGGTAAAGATGATGGAGTTAAGGATTTGCTTGATATTTTACTTGACATTTATGAAGATAAAAGCTCAGAAATTAAACTCACAAGAGACAATATCAAGGCTTTTGTTATGAATATATTCGGCGCCGGAACTGAAACATCAGCAGCGGCGACAGAGTGGGCATTAGCAGAGCTAATCAACAACCCATCCGCCATGGCCAAAGCAACTCAAGAACTCGACTCCGTCACCGGAAAAACCCGTCTCCTTCACGAATCCGATCTCCCCAATCTCCCCTATCTCCAAGCCGTCGTCAAAGAGACCCTCCGCCTCCATCCCACGGCGCCGCTCATCGTCCGGGAGGCCACCGAGCCCTGTGCCGTCGCCGGCTACCACATTCCAGCCAAAACCCGCCTGCTTGTCAACGTCTGGGCCATAGCCCGAGACCCGGCCCATTGGCCCGATCCATCCCGGTTCGACCCGGAGCGGTTCTTGAACCACCCGGCCGGTTCTGACCTACAGAGCTTTGATCTTATGCCGTTTGGGAGCGGTCGCCGGAGCTGCCCCGGCGCCGCCCTGGCTCTGGTGGCGGTGCCGGCGGTTCTCGGGAGGTTGATTCAGTGTTTTGAGTGGAGGGTTGACGGCGGTGGCGTTGATATGGAAGAAGGGCCAGGAATCTCTCTCCGGCGAGCTCATCCTTTGGTTGTAGCACCAGTGGCTAGGCTTCATCCTTCGGTTCTAGTAATGTCTTAA | 1530 | 49.8 | MADFPDYLLLLSLLLISFLFIQLIFTRNQPDKLRRPPSPPSWPVVGHLHLLGRIPHQALHKLSCQYGPLIHLFFGSKPCVIVSNSEMAKQFLKINESSFLNRPIRLNINYLTYGSADFTFAPYGPYWKFLKKLCMTELLGGRTLDLHRPIRDEEMKLFVQRIHEQATVGKMVDVGVDLSRLMNNIISRMALRRRCSEKEDGSEEVGKLVGEMCELAGELNIADMIWFCKRLDVQGFGRRVRDVRRRYDIMMEKIIKEHEEERKRKKEDGKDDGVKDLLDILLDIYEDKSSEIKLTRDNIKAFVMNIFGAGTETSAAATEWALAELINNPSAMAKATQELDSVTGKTRLLHESDLPNLPYLQAVVKETLRLHPTAPLIVREATEPCAVAGYHIPAKTRLLVNVWAIARDPAHWPDPSRFDPERFLNHPAGSDLQSFDLMPFGSGRRSCPGAALALVAVPAVLGRLIQCFEWRVDGGGVDMEEGPGISLRRAHPLVVAPVARLHPSVLVMS | 509 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 28504346 | 28507902 | - | Lsi03G017130.1 | Lsi03g01713 | 659463 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi03g01713 | 509 | Pfam | Cytochrome P450 | 36 | 485 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | PRINTS | E-class P450 group I signature | 447 | 470 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | PRINTS | E-class P450 group I signature | 298 | 315 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | PRINTS | E-class P450 group I signature | 318 | 344 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | PRINTS | E-class P450 group I signature | 361 | 379 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | PRINTS | E-class P450 group I signature | 401 | 425 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | PRINTS | E-class P450 group I signature | 437 | 447 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 6 | 503 | - | - | |
Lsi03g01713 | 509 | PANTHER | CYTOCHROME P450 | 6 | 503 | - | - | |
Lsi03g01713 | 509 | PRINTS | P450 superfamily signature | 362 | 373 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | PRINTS | P450 superfamily signature | 438 | 447 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | PRINTS | P450 superfamily signature | 447 | 458 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | PRINTS | P450 superfamily signature | 309 | 326 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | SUPERFAMILY | Cytochrome P450 | 36 | 500 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | Gene3D | Cytochrome P450 | 25 | 500 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01713 | 509 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 440 | 449 | IPR017972 | GO:0005506|GO:0016705 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi03g01713 | Lsi-Chr3:28504346 | Lsi07g00668 | Lsi-Chr7:7169224 | 1.46E-133 | dispersed | |
Lsi03g01713 | Lsi-Chr3:28504346 | Lsi03g01714 | Lsi-Chr3:28510341 | 4.96E-92 | tandem | |
Lsi01g01891 | Lsi-Chr1:21807366 | Lsi03g01713 | Lsi-Chr3:28504346 | 0 | transposed | |
Lsi02g02595 | Lsi-Chr2:32371630 | Lsi03g01713 | Lsi-Chr3:28504346 | 4.71E-74 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi03g01713 | K24188 | - | csv:101205411 | 783.867 |