Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi03g01948 | ATGGATATTGAAATTGCAGGGTTTATTTTATTGTTATTTTTGTGGGGTTTATGGGTATGGCGCCGTCGTGGAGCGGCGGCCGATGAGCAGCTCCCGCCGGGGCCGCCTTGTTGGCCGGTGGTTGGAAACTTGCTTCAACTCAGTTTTTCCGCTCATGAATCCTTCACAAAACTCGCCGCCAAGTATGGCCCAATCATGACCCTCCAACTCGGGTCAATGAAAACAGTAGTTGTTTCCTCAAGCACGGCGGCGCGTGAGATGTTCAAATCCCACGATGCGCCGCTGTCAGGACGCATGATATACGAGGCAATGAAAGGGGACCACGGCACAGAAGGTTCCTTAATCACCTCCCAATATGGGCCCCACTGGCGGATGCTACGACGACTCGCAACGTCAGAGTTCTTCATCACTCGTCAGCTCGAAGCCATGAAATACGTCCGTCGTCGGTGTATCGACGCCATGATCCGCCACATCGAAGAGGAAATAGAGAGTGCCGCGAGCGGGGCGTGTGGGAACGCGCCGCCGTTGGACTTGGGGAAATTTATGTTCATAATGAGCTTTAATTTAATTGGGAATCTGATATTCTCAAAAGATTTATTAGAGGCAAATTCGAAGAGGGGAAATGAATTTTATTACCATACGAGAAAGGTGATGGAGATGGCCGGAAAGCCAAATGTGGCGGACTTTTTGCCGGCGTTACGGTGGGTGGATCCGCAGGGGATTAGGAGGAAGACGCAGTTTCATGTGAATAAAGCATTTGAAATTGCAGGGGAATTTATAAAAGAGAGATTATTAATAAAGGAAAAAGGGAATATTATTATTACTGATGAAAGAAAAGAAGAAAGGAAAAAAGATTATTTGGATGTGCTTTTGGAGTTTCGTGGCGATGGGGTTGAGGAGCCTTCTCATTTCTCTTCTTGGATCATCAACGTTATTATCTTCGAGATGTTCACGGCGGGGACAGACACCACCACCAGTACACTAGAATGGGCAATGGCGGAGCTCCTCCACAACCCGGCAGCGCTGCAGAAACTTCAGGCGGAGCTCCGAGCCACCATCCCGCCGAATGGCAACCTTGAAGAAACCCATCTCCAAAACCTCCCGTATCTCGACGCCGTCGTTAAAGAAACCCTCCGCCTCCACCCACCACTGCCGTTCCTTTTCCCGAGAATGGCCATGAAGCCCTGCAAAATCTTCGGCTATCGAATTCCGGCTGAAACCCAAGTCTTGGTCAACTTCTGGGCCATCGGCCGAGACCCCAAAAACTGGAAAGACGCTTTGGTTTTCTCGCCGGAGAGATTCTTGGATCCCACCGGTGGAAAGGATTTCAAGGGTCAGCACTTTGACTTCATTCCATTTGGCTCCGGCCGCCGCATGTGCCCGGCGGTGCCGCTGGCGTCGAGGGTTCTTCCAATGGCTTTGGGGTTATTGATTATGTCGTTTGATTGGGCTTTGCCGGACGGAATTTCGCCGGAGGAGATGGATATGTCGGAGCAAATGGGAATTACTCTCCGAAAGAAGGTTCCATTGAAGGCTATTCCGACTCCTCACAAACGACGTCGTTTTGATTAA | 1572 | 50.19 | MDIEIAGFILLLFLWGLWVWRRRGAAADEQLPPGPPCWPVVGNLLQLSFSAHESFTKLAAKYGPIMTLQLGSMKTVVVSSSTAAREMFKSHDAPLSGRMIYEAMKGDHGTEGSLITSQYGPHWRMLRRLATSEFFITRQLEAMKYVRRRCIDAMIRHIEEEIESAASGACGNAPPLDLGKFMFIMSFNLIGNLIFSKDLLEANSKRGNEFYYHTRKVMEMAGKPNVADFLPALRWVDPQGIRRKTQFHVNKAFEIAGEFIKERLLIKEKGNIIITDERKEERKKDYLDVLLEFRGDGVEEPSHFSSWIINVIIFEMFTAGTDTTTSTLEWAMAELLHNPAALQKLQAELRATIPPNGNLEETHLQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCKIFGYRIPAETQVLVNFWAIGRDPKNWKDALVFSPERFLDPTGGKDFKGQHFDFIPFGSGRRMCPAVPLASRVLPMALGLLIMSFDWALPDGISPEEMDMSEQMGITLRKKVPLKAIPTPHKRRRFD | 523 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 30870793 | 30874625 | - | Lsi03G019480.1 | Lsi03g01948 | 659698 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi03g01948 | 523 | SUPERFAMILY | Cytochrome P450 | 32 | 516 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi03g01948 | 523 | PANTHER | CYTOCHROME P450 FAMILY 1 | 1 | 517 | - | - | |
Lsi03g01948 | 523 | Pfam | Cytochrome P450 | 32 | 505 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | PRINTS | E-class P450 group I signature | 412 | 436 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | PRINTS | E-class P450 group I signature | 328 | 354 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | PRINTS | E-class P450 group I signature | 371 | 389 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | PRINTS | E-class P450 group I signature | 308 | 325 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | Gene3D | Cytochrome P450 | 20 | 514 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | PRINTS | P450 superfamily signature | 319 | 336 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | PRINTS | P450 superfamily signature | 372 | 383 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi03g01948 | 523 | PANTHER | CYTOCHROME P450 76A1-LIKE | 1 | 517 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi03g01948 | Lsi-Chr3:30870793 | Lsi09g00350 | Lsi-Chr9:3651984 | 7.09E-117 | dispersed | |
Lsi11g00082 | Lsi-Chr11:866574 | Lsi03g01948 | Lsi-Chr3:30870793 | 5.33E-104 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi03g01948 | - | - | csv:101222700 | 921.383 |