Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi03g01962 ATGAAATATACGTGGCAAGGGTTTAAGCAACGTGGAAGATTCCCAGTCGGCCTTTGTGGCCACAATCTCCGCCAAATTCCCCCAATTGGGGAAAGCTCTCCGCCGCGATTCTCCGCCATGGCGACCCGCCTTCCGAGGACGAAGCCATTCTGGTCCCTAACTTCCAGATCATCGCCCGACGAAAACTCTCCGATTTCCGTTCTCATCAGATCTATGCGAAGGTCGTCGTCGTCGTCGTCGTCATCTTCCTCCTCGTCTTCGTCTTCGTCGCCGAGTAAATCACAGAAAACGGAGAAGTTAGTGGACCGTCTTTCATCGGTGATAAACGCCGTCAATGACCGCAAACTCCCTCCGGAGCTTCGAGGCCAATGTAACTCTGTCAGGTCAGAAACTGATCTGATAAATGTTGTTGAGCGGAGGATTTGGAATTCCATGGAAGAAGGGAAATTCGAGAACTTACCAGGAAAAGGGAAACCTCTGAACCTGTCTACTAATCCTCATGCTGATCCAGCAGAAGACACATTGTACCGGATCTTGTCCAAGAATGGATGTGCACCTGAATGGGTTGAACTCAACAAAGACATCAGGAGTAACATATCTGTATGGCGATCGTCGTTGAAGAAAGCATTTGAAAGTAGAGGCAATGGAGATCATTCACAATGGACTGAGAGTTCGGAGGCTTTGCAAGTTCAATTGCAACACATCAATGACAAGGTTAGTTAA 723 48.27 MKYTWQGFKQRGRFPVGLCGHNLRQIPPIGESSPPRFSAMATRLPRTKPFWSLTSRSSPDENSPISVLIRSMRRSSSSSSSSSSSSSSSSPSKSQKTEKLVDRLSSVINAVNDRKLPPELRGQCNSVRSETDLINVVERRIWNSMEEGKFENLPGKGKPLNLSTNPHADPAEDTLYRILSKNGCAPEWVELNKDIRSNISVWRSSLKKAFESRGNGDHSQWTESSEALQVQLQHINDKVS 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31026974 31029097 + Lsi03G019620.1 Lsi03g01962 659712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi03g01962 240 MobiDBLite consensus disorder prediction 71 95 - -
Lsi03g01962 240 MobiDBLite consensus disorder prediction 71 100 - -
Lsi03g01962 240 PANTHER OS08G0560600 PROTEIN 40 239 - -
Lsi03g01962 240 Pfam DnaJ homologue, subfamily C, member 28, conserved domain 137 199 IPR018961 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi03g01962 K19373 - csv:101220350 325.094