Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lsi03g02066 | ATGGCTGCTCTCGTGGAAGAGGTTCTACCTCCATCGTTGGATGCCACCGCCGAACAACCTCCTCTGTTCGACGGAACTACTAGGTTGTATACTGCTTACATATGCCCATATGCTCAACGCGTGTGGATCACCCGGAATTACAAGGGACTGCAAGATAAAATCAAGCTAGTTCCTCTCAACCTTTTTAAAAGGCCTGACTGGTATAAGGAGAAAGTATACCCTATAAACAAGGTGCCATCTCTGGAACATAATGGGAAAGTTATTGGAGAAAGTCTTGATCTGATCAAATATGTTGATAGCAACTTTGAAGGACCTTCTCTTCTCCCAGATGATCCTGCTAAAAGAGAGTACGCTGAAGAGTTGCTATCCTACAGCGATACGTTTAACGGTGCAATATTATCTTCGTTTAAAGGTGACACCGCAAAGGAAGCAGGTGCTCAATTTGATTACTTGGAAAATGCTTTGCAAAAATTTGACGGCCCCTTCTTCCTTGGAGAGATCAGTCAGGTGGATATAGCATACATTCCATTTGTTGAAAGGTACCAGGTTTTCTTATTAGAGGCTCTCAAGATTGACATCACAGAAGGAAGGCCTAAACTAGCTGCATGGATTGAGGAGCTCAATAAGATTGATGCGTACAAGCAAACAAAAGCAGATCCCAAGCTAATTGTTGAAGCTTATACAAAGCGATTTTTGTGTTTGAAGCGATTAGTTTGTGCAAGTCAGTTGACGTCTAAA | 738 | 42.28 | MAALVEEVLPPSLDATAEQPPLFDGTTRLYTAYICPYAQRVWITRNYKGLQDKIKLVPLNLFKRPDWYKEKVYPINKVPSLEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPAKREYAEELLSYSDTFNGAILSSFKGDTAKEAGAQFDYLENALQKFDGPFFLGEISQVDIAYIPFVERYQVFLLEALKIDITEGRPKLAAWIEELNKIDAYKQTKADPKLIVEAYTKRFLCLKRLVCASQLTSK | 246 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 31980418 | 31984327 | - | Lsi03G020660.1 | Lsi03g02066 | 659816 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lsi03g02066 | 246 | SUPERFAMILY | GST C-terminal domain-like | 102 | 231 | IPR036282 | - | |
| Lsi03g02066 | 246 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 25 | 106 | IPR004045 | - | |
| Lsi03g02066 | 246 | Pfam | Glutathione S-transferase, C-terminal domain | 143 | 205 | - | - | |
| Lsi03g02066 | 246 | Pfam | Glutathione S-transferase, N-terminal domain | 29 | 105 | IPR004045 | - | |
| Lsi03g02066 | 246 | Gene3D | - | 104 | 234 | - | - | |
| Lsi03g02066 | 246 | SUPERFAMILY | Thioredoxin-like | 20 | 107 | IPR036249 | - | |
| Lsi03g02066 | 246 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 3 | 232 | IPR044629 | GO:0004364 | |
| Lsi03g02066 | 246 | SFLD | Glutathione Transferase (cytosolic) | 28 | 208 | IPR040079 | - | |
| Lsi03g02066 | 246 | PANTHER | GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC | 3 | 232 | - | - | |
| Lsi03g02066 | 246 | CDD | GST_C_Lambda | 111 | 227 | - | - | |
| Lsi03g02066 | 246 | SFLD | Main (cytGST) | 28 | 208 | - | - | |
| Lsi03g02066 | 246 | Gene3D | Glutaredoxin | 1 | 103 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lsi03g02066 | Lsi-Chr3:31980418 | Lsi01g01487 | Lsi-Chr1:12961182 | 1.54E-11 | dispersed | |
| Lsi03g02065 | Lsi-Chr3:31963867 | Lsi03g02066 | Lsi-Chr3:31980418 | 4.09E-140 | tandem | |
| Lsi03g02066 | Lsi-Chr3:31980418 | Lsi03g02067 | Lsi-Chr3:31986884 | 4.52E-113 | tandem | |
| Lsi03g02066 | Lsi-Chr3:31980418 | Lsi04g00829 | Lsi-Chr4:8002650 | 6.77E-109 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lsi03g02066 | K00799 | - | csv:101211241 | 438.343 |