Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi03g02067 | ATGTTAACTGTCGTACCGGAAGTTCGTCCGCCGTCATTGGAAGCTGACGCCGAGCAACCTTCGCTCTTTGACGGAACCGCCAGGTTGTATATGGCTTATTATTGCCCATTTGCACAACGTGCTTGGATCACAAGAAATTACAAGGGATTACATAATAAAATTAAATTAGTGCCTCTAAACCTTCAAAACAGGCCTGCCTGGTATAAGGAAAAAGTCAACCCCACAAACAAGGTTCCAGCATTGGAACACAATGGAAAAGTTATTGGAGAAAGCCTTGATTTGATCAAATACATAGAGAGCAACTTTGAAGGGCCTTCTCTATTCCCAGATGATCTTGCTAAAAGACAATTTGGTGAAGAGTTGCTAGCTTATACTGATACATTCACTGGGGCAGTGTACCCTTCATTTAAGGGTCCTCAATTTGATTACTTGGAGAATGCTCTGCAGAAATTTGATGATGGCCCATTCTTTTTGGGTCAATTCAGTTGGGTGGATATTGCATACATCACATTTATTGAAAGATTTCATGTATTCTTAAATGAAGTTTTCAAGTATGATATCACAGAAGGAAGACCTAATCTAGCCGCATGGATTGAGGAGTTCAACAAGATTGATGCTTACAAACAAACAAAATATGATCCTAAAGCGATTGTTGAACTTTACAAGAAGCGCTTCATGGCATTTCCGGGCTGCCTTGCCGACCTCATGGGGTCGGTTCTTTGTCTTTGTGTGCTGACCTTGAGCATGGAAGAGGTTCTACCTCCGTCGTTGGATGCCACCGCCGAACAACCTCCTCTGTTCGACGGAACTACTAGGTTGTATACTGCTTACATCTGCCCCTATGCTCAACGTGTGTGGATCATCCGTAATTACAAGGGACTACAAGATAAAATTAAGCTAGTTCCTCTCAACCTTAATAACAGGTATAAGGAGAAAGTATATCCTATAAACAAGGATCCTGCTAAAAGAGAGTATGCTGAAGAGTTGCTATCCTACAACAATACGTTTATCAGCGCAATAATCTCTTCTTTTAAAGGCGACACCGCAAAGGAAGCAGGTGCTCAATTTGATTACTTGGAAAATGCTTTGCAAAAATTTGATGGCCCTTTCTTCCTTGGAGAGATCAGTCAGGTGGATATAGCATACATCCCATTTGTTGAAAGGTACCACGTTTTCTTATTTGAGGTTTTCAAGATTGACATCACTGAAGGAAGGCCTAAATTAGCTGCATGGATTGAGGACTTCAACAAGATTGATGCTTACAAGCAAACAAAATATGATCCTAAAGCCGTTGTTGAATATTACACAAAGCGCTTCATGGTACCATACACTTCTTAA | 1338 | 40.88 | MLTVVPEVRPPSLEADAEQPSLFDGTARLYMAYYCPFAQRAWITRNYKGLHNKIKLVPLNLQNRPAWYKEKVNPTNKVPALEHNGKVIGESLDLIKYIESNFEGPSLFPDDLAKRQFGEELLAYTDTFTGAVYPSFKGPQFDYLENALQKFDDGPFFLGQFSWVDIAYITFIERFHVFLNEVFKYDITEGRPNLAAWIEEFNKIDAYKQTKYDPKAIVELYKKRFMAFPGCLADLMGSVLCLCVLTLSMEEVLPPSLDATAEQPPLFDGTTRLYTAYICPYAQRVWIIRNYKGLQDKIKLVPLNLNNRYKEKVYPINKDPAKREYAEELLSYNNTFISAIISSFKGDTAKEAGAQFDYLENALQKFDGPFFLGEISQVDIAYIPFVERYHVFLFEVFKIDITEGRPKLAAWIEDFNKIDAYKQTKYDPKAVVEYYTKRFMVPYTS | 445 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 31986884 | 31996811 | - | Lsi03G020670.1 | Lsi03g02067 | 659817 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi03g02067 | 445 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 4 | 226 | IPR044629 | GO:0004364 | |
Lsi03g02067 | 445 | SUPERFAMILY | GST C-terminal domain-like | 318 | 439 | IPR036282 | - | |
Lsi03g02067 | 445 | SUPERFAMILY | Thioredoxin-like | 23 | 107 | IPR036249 | - | |
Lsi03g02067 | 445 | SFLD | Main (cytGST) | 28 | 201 | - | - | |
Lsi03g02067 | 445 | Gene3D | Glutaredoxin | 2 | 103 | - | - | |
Lsi03g02067 | 445 | SUPERFAMILY | GST C-terminal domain-like | 102 | 225 | IPR036282 | - | |
Lsi03g02067 | 445 | SUPERFAMILY | Thioredoxin-like | 264 | 309 | IPR036249 | - | |
Lsi03g02067 | 445 | Pfam | Glutathione S-transferase, N-terminal domain | 278 | 311 | IPR004045 | - | |
Lsi03g02067 | 445 | Pfam | Glutathione S-transferase, C-terminal domain | 141 | 199 | - | - | |
Lsi03g02067 | 445 | Pfam | Glutathione S-transferase, C-terminal domain | 351 | 413 | - | - | |
Lsi03g02067 | 445 | SFLD | Glutathione Transferase (cytosolic) | 28 | 201 | IPR040079 | - | |
Lsi03g02067 | 445 | PANTHER | GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC | 246 | 321 | - | - | |
Lsi03g02067 | 445 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 25 | 106 | IPR004045 | - | |
Lsi03g02067 | 445 | Gene3D | - | 312 | 442 | - | - | |
Lsi03g02067 | 445 | Gene3D | - | 104 | 228 | - | - | |
Lsi03g02067 | 445 | CDD | GST_C_Lambda | 111 | 222 | - | - | |
Lsi03g02067 | 445 | PANTHER | GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC | 4 | 226 | - | - | |
Lsi03g02067 | 445 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 246 | 321 | IPR044629 | GO:0004364 | |
Lsi03g02067 | 445 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 318 | 440 | IPR044629 | GO:0004364 | |
Lsi03g02067 | 445 | Pfam | Glutathione S-transferase, N-terminal domain | 29 | 105 | IPR004045 | - | |
Lsi03g02067 | 445 | PANTHER | GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC | 318 | 440 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi03g02065 | Lsi-Chr3:31963867 | Lsi03g02067 | Lsi-Chr3:31986884 | 5.66E-99 | dispersed | |
Lsi03g02067 | Lsi-Chr3:31986884 | Lsi04g00829 | Lsi-Chr4:8002650 | 1.22E-71 | dispersed | |
Lsi03g02066 | Lsi-Chr3:31980418 | Lsi03g02067 | Lsi-Chr3:31986884 | 4.52E-113 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi03g02067 | K00799 | - | csv:101210004 | 426.402 |