Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi03g02126 ATGTTTTTCAATCTCTCAATTGTCGCGTCTCTGCTTGTAGCCTCAGTAGTCTCAGCTGCTTCTGAAGGTCCTAATTTTATCTTCCATGGCTTCCAATCTGCAAATTTATCACTCGATGGTATGGCTGTTGTTACCCAAAATGGCCTCTTGAAACTGACCAACGAGACCAGGCAAAGAATTGGCCATGCATTTTATCTTAATCCTGTAGATTTTGTTAATTCTTCTCATGGGGTTTCATCGTTCTCAACTACTTTCGTCTTTGCCATTAGATCTGAATACCCAAATCTAAGTGGCCATGGAATTGCCTTTGCGGTGGCTCCGACGAGAACTTTCCCCGGAGCTCAGCCAAGTCAGCATCTTGGCCTTTTCAATGACGACAACAACAATAACACAAGCAACCATATTTTTGCTGTAGAACTCGACACAATTCAGAATTTAGAGTTGAAAGATATCGATGGGAATCACGTTGGCATAGATATAAATGGGTTGATTTCTGTGAAAGCTGAAACTGCTGGGTTTTATCCCGACAACAATGGGAAATTCAGAAACTTGACTCTTATAAGTGGCCAACCAATGCAGGTTTGGATTGAATATGATGGTATCAACAAAGAAATCAATGTCACTTTGGCGCCAATTAACATACCCAAACCCAAAACTCCACTTTTGTCTTACTCCCGTGACCTTTCATCTGTCATAAACAGCTCTTCCATGTTCGTCGGTTTTTCATCCTCCACTGGATCCGTTTCAACTTCTCATTATATTTTAGGTTGGAGTTTCAGACTAAACGGACAGGCTCAAAGTCTTGACATTTCCCGTCTTCCAAAGCTGCCTCAGAAAAAACAGATATCCAAAGTTTTAACAATTGGGTTGCCTATAATTTCTGGAGGGATTGTTTTGTTGGTGATTTTTGGAATTGTTCATGTTGTCAGAAGGAAGAGGAAGTTTGCCGAGCTGCTCGAAGATTGGGAGCTTGATTATGGGCCTCACAGGTTCAAATACAAAGACTTATACGTGGCTACAAATGGATTTAAAGAGAAAGACATTCTGGGTTCTGGAGGATTTGGACGAGTCTACAAAGGGGTATTACCAAAATCAAAACTTGAAATAGCTGTCAAGAGGGTTTCTCATGAATCAAGACAGGGAATGAAAGAATTTGTGGCTGAGATAGTTAGTCTAGGGAGGCTTCGCCATAGAAACCTTGTACAACTTTTAGGCTATTGCAGACGAAAAGGAGAGCTTCTTTTAGTATACGATTACATGCAGAATGGAAGTTTGGATAAGTACCTGTTTGGCGAACCAAATCCCAGTCTGAATTGGAGCCAGAGGTTTCGAATCATAAAAGGAGTGGCCTCAGGGCTGCTTTACCTGCATGAAGAATGGGAGCAAGTTATTATTCACAGAGATGTGAAAGCCAGTAATGTGTTGCTAGACAATGAGTTAAATGGAAGATTGGGAGATTTTGGTTTAGCGAGACTGTATGACCATGGAACAGACCCTCAAACAACTCACATAGTGGGAACACTAGGATATTTGGCTCCAGAGCACACCAGATCCGGCAGGCCAACGACCCACATGGATGTGTTTGCTTTTGGGGCATTTCTGCTGGAGGTAGCAACAGGAAAGAGGCCAATAGAGATTCGTGGGATGACAGAAGATGTAATATTGGTGGATTGGGTGTTTTTATGTTGGGCAAGAGGAGCCATTGTCGATGCCAGGGATCCAAACTTGGGAACAGAGTATGTAGCAGAGGAGATGGAAATGGTGCTGAAACTTGGATTGTTGTGCTCTCAATCCAACCCAATGGCCAGGCCTAGCATGCGCCAAATTGTGCAGTACTTGGAAGGAGACGCTCCCATGCCAGAGATGGCTTCTATAGAAACATCAGGCGGTGGATATGAAGGTTTTGATGATCTTGCCATGTCGTACACCTCTTCCCTGGATAAGGCTATAGCATTTTCTACTTCTTCCTTTGAGAGAGGTTTCGCCCATTCTTCTGATGCGCAGTCTCTCCTGTCAGGTGGCCGTTGA 2028 43.2 MFFNLSIVASLLVASVVSAASEGPNFIFHGFQSANLSLDGMAVVTQNGLLKLTNETRQRIGHAFYLNPVDFVNSSHGVSSFSTTFVFAIRSEYPNLSGHGIAFAVAPTRTFPGAQPSQHLGLFNDDNNNNTSNHIFAVELDTIQNLELKDIDGNHVGIDINGLISVKAETAGFYPDNNGKFRNLTLISGQPMQVWIEYDGINKEINVTLAPINIPKPKTPLLSYSRDLSSVINSSSMFVGFSSSTGSVSTSHYILGWSFRLNGQAQSLDISRLPKLPQKKQISKVLTIGLPIISGGIVLLVIFGIVHVVRRKRKFAELLEDWELDYGPHRFKYKDLYVATNGFKEKDILGSGGFGRVYKGVLPKSKLEIAVKRVSHESRQGMKEFVAEIVSLGRLRHRNLVQLLGYCRRKGELLLVYDYMQNGSLDKYLFGEPNPSLNWSQRFRIIKGVASGLLYLHEEWEQVIIHRDVKASNVLLDNELNGRLGDFGLARLYDHGTDPQTTHIVGTLGYLAPEHTRSGRPTTHMDVFAFGAFLLEVATGKRPIEIRGMTEDVILVDWVFLCWARGAIVDARDPNLGTEYVAEEMEMVLKLGLLCSQSNPMARPSMRQIVQYLEGDAPMPEMASIETSGGGYEGFDDLAMSYTSSLDKAIAFSTSSFERGFAHSSDAQSLLSGGR 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32450062 32452089 - Lsi03G021260.1 Lsi03g02126 659876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi03g02126 675 CDD STKc_IRAK 349 615 - -
Lsi03g02126 675 Pfam Legume lectin domain 25 274 IPR001220 GO:0030246
Lsi03g02126 675 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 6 659 - -
Lsi03g02126 675 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Lsi03g02126 675 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 278 IPR013320 -
Lsi03g02126 675 SUPERFAMILY Protein kinase-like (PK-like) 324 622 IPR011009 -
Lsi03g02126 675 SMART serkin_6 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi03g02126 675 Pfam Protein kinase domain 343 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi03g02126 675 Gene3D - 24 275 - -
Lsi03g02126 675 Gene3D Transferase(Phosphotransferase) domain 1 420 629 - -
Lsi03g02126 675 ProSiteProfiles Protein kinase domain profile. 343 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi03g02126 675 PANTHER - 6 659 - -
Lsi03g02126 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Lsi03g02126 675 CDD lectin_legume_LecRK_Arcelin_ConA 25 263 IPR001220 GO:0030246
Lsi03g02126 675 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Lsi01g01442 Lsi03g02126 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g02126 Lsi-Chr3:32450062 Lsi03g02130 Lsi-Chr3:32463610 0 dispersed
Lsi03g02126 Lsi-Chr3:32450062 Lsi03g02127 Lsi-Chr3:32454582 0 tandem
Lsi02g00756 Lsi-Chr2:6947359 Lsi03g02126 Lsi-Chr3:32450062 2.14E-158 transposed
Lsi06g01590 Lsi-Chr6:26295136 Lsi03g02126 Lsi-Chr3:32450062 1.21E-174 transposed
Lsi08g00117 Lsi-Chr8:2544376 Lsi03g02126 Lsi-Chr3:32450062 0 transposed
Lsi08g00532 Lsi-Chr8:13287602 Lsi03g02126 Lsi-Chr3:32450062 3.27E-97 transposed
Lsi09g01148 Lsi-Chr9:18426235 Lsi03g02126 Lsi-Chr3:32450062 1.54E-58 transposed
Lsi11g01564 Lsi-Chr11:23925398 Lsi03g02126 Lsi-Chr3:32450062 4.47E-155 transposed
Lsi03g02039 Lsi-Chr3:31752901 Lsi03g02126 Lsi-Chr3:32450062 2.35E-121 transposed
Lsi01g01442 Lsi-Chr1:12571048 Lsi03g02126 Lsi-Chr3:32450062 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83517 PF00069 Pkinase 8.80E-47 CL0016 Lsi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi03g02126 - - csv:116402748 1171.76