Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi04g00059 ATGGCTGATTGTGGAACAGAACAGCGTACTTTGGAAGATACTTCAACGTGGGCTGTTGCAGTTGTTTGTTTTTTCTTGGTTGTTATTTCAATCTTCATTGAACATGTCATTCACCTCACTGGGAAGTGGCTGGAGAAAAGGCACAAGCCGGCTCTTGTTGAAGCTCTAGAAAAGGTTAAAGCAGAGCTTATGCTGTTGGGATTTATATCCCTACTTCTAACGGTAGGCCAAGATGCTGTCACTCAAATTTGCGTTTCGAAGGAGCTTGCGGTAACTTGGCTTCCCTGTGCAGCAAAAGCTAAAGCAGGAGTAAAAGTTGCGAAGAACACTCGTCTTAAGCTTCTTGAATTTTTAGATCCTGACTATGGTTCAAGGCGTATTTTAGCCTCAAAAGGAGACGATGCGTGTGCTAAGAGGGGCCAACTCGCCTTCGTTTCGGCATATGGAATCCATCAGCTCCATATTTTCATCTTTGTATTGGCTGTCTTCCATGTCCTATACTGCATAATCACTTTGGCTTTGGGCAGAACAAAGATGAGCAAATGGAAGGCCTGGGAGGATGAGACAAAGACAATTGAATACCAGTACTATAATGATCCAGCAAGATTTAGATTTGCAAGAGATACAACATTTGGACGCCGACACTTGAGCTTCTGGAGTCGTACACCAATTTCCCTCTGGATTGTTTGTTTCTTCAGACAATTCTTTGGATCAGTTACCAAGGTTGATTACATGACACTGAGACATGGATTCATCGTTGCACATCTAGCGCCCGGAAGTGAAGTAAAATTTGATTTCCACAAATACATTAGCAGATCTCTCGAAGACGACTTTAAAGTTGTTGTGGGGATTAGTCCAGCGATGTGGCTATTTGCTGTTCTCTTCATCCTAACCAATACAAATGGGTGGTATTCATATCTATGGCTGCCTTTCATCTCCTTAGTTATAATTCTATTAGTGGGAACGAAGCTCCATGTTATCATAACTCAGATGGGATTGACAATCCAAGAAAGGGGCCATGTTGTGAAGGGTGTTCCCGTCGTTCAACCCCGGGATGACCTGTTTTGGTTCGGACGTCCGCAACTTATTCTCTTTCTGATTCACTTTGTTCTCTTTATGGTACTATATTTAAAAAATGCATTTCAGCTTGCCTTCTTTGCTTGGACCACATACGCATTTAAGTGGAGAGCTTGCTTCCATCAGCGAATTGAAGATATTGCCATCAGACTCTCAATGGGGGTTATCATACAAGTTCTTTGCAGTTATGTGACACTCCCACTCTATGCTTTGGTGACTCAGATGGGCTCTAACATGAAACCAACCATTTTCAACGACCGAGTGGCAACGGCATTGAAGAACTGGCACCACTCTGCCAAGAAGAACATGAAGCACCATCGCAACCCAGATGGTACCTCGCCATTCTCAAGCAGGCCAACTACTCCAACGCATGGCATGTCTCCTATTCACCTTCTGCACAAACATCAGCATGGCAGCACATCTCCCAGGCTATCTGATGCCGAACCCGATCGTTGGGACATTGAAGAGTTGCCTCCTTCTTCACACCATAGTAGAGCCCATGATCATCAAGAACAAGAACATTCTGAGACAAGTAGAGAACAGGAAATGACAGTTCAACGGCCAAGTTCAACGGAAACCGGTTCCACGACACGTCCTGCTCGCCCTCAACATGAAATCACTAGGAGTCCCTCAGACTTCTCATTTGCCAAATGA 1731 44.31 MADCGTEQRTLEDTSTWAVAVVCFFLVVISIFIEHVIHLTGKWLEKRHKPALVEALEKVKAELMLLGFISLLLTVGQDAVTQICVSKELAVTWLPCAAKAKAGVKVAKNTRLKLLEFLDPDYGSRRILASKGDDACAKRGQLAFVSAYGIHQLHIFIFVLAVFHVLYCIITLALGRTKMSKWKAWEDETKTIEYQYYNDPARFRFARDTTFGRRHLSFWSRTPISLWIVCFFRQFFGSVTKVDYMTLRHGFIVAHLAPGSEVKFDFHKYISRSLEDDFKVVVGISPAMWLFAVLFILTNTNGWYSYLWLPFISLVIILLVGTKLHVIITQMGLTIQERGHVVKGVPVVQPRDDLFWFGRPQLILFLIHFVLFMVLYLKNAFQLAFFAWTTYAFKWRACFHQRIEDIAIRLSMGVIIQVLCSYVTLPLYALVTQMGSNMKPTIFNDRVATALKNWHHSAKKNMKHHRNPDGTSPFSSRPTTPTHGMSPIHLLHKHQHGSTSPRLSDAEPDRWDIEELPPSSHHSRAHDHQEQEHSETSREQEMTVQRPSSTETGSTTRPARPQHEITRSPSDFSFAK 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 739689 744533 + Lsi04G000590.1 Lsi04g00059 660108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi04g00059 576 MobiDBLite consensus disorder prediction 541 576 - -
Lsi04g00059 576 PANTHER MLO-LIKE PROTEIN 1 4 574 IPR004326 GO:0006952|GO:0016021
Lsi04g00059 576 MobiDBLite consensus disorder prediction 498 540 - -
Lsi04g00059 576 MobiDBLite consensus disorder prediction 468 483 - -
Lsi04g00059 576 Pfam Mlo family 8 494 IPR004326 GO:0006952|GO:0016021
Lsi04g00059 576 PANTHER MLO-LIKE PROTEIN 4 574 - -
Lsi04g00059 576 MobiDBLite consensus disorder prediction 456 576 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g00280 Lsi-Chr1:2491688 Lsi04g00059 Lsi-Chr4:739689 2.07E-77 dispersed
Lsi02g01432 Lsi-Chr2:19938652 Lsi04g00059 Lsi-Chr4:739689 2.02E-171 dispersed
Lsi04g00059 Lsi-Chr4:739689 Lsi10g01281 Lsi-Chr10:17031805 0 dispersed
Lsi07g01097 Lsi-Chr7:16356654 Lsi04g00059 Lsi-Chr4:739689 6.58E-83 dispersed
Lsi04g00059 Lsi-Chr4:739689 Lsi02g01429 Lsi-Chr2:19828608 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi04g00059 K08472 - csv:101218929 1085.09