Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi04g00097 ATGATGGCTGGCAGAGGAATCTCAGGCTGCTCCAACATATGGAGCATCATCGTCCACGTCATCACCGGACGGTGGTTCGCGGTATTCGCTTCACTCCTAATCATGGCGACGGCTGGAACAGTGTTCATGTTCAGCATGTATTCCAACGACATAAAATTTGTTTTAGGTTACGACCAAACGACTTTAAATCTGTTGAGTTTTTTCAAAGATTTAGGTGGAAATGTTGGCATTTTGTCTGGACTTATTAGCGAGATTACGCCACCATGGGTAGTTCTATCCATCGGCGCCGTTTTGAATTTCTTTGGTTACTTTATGATTTGGCTCGCCATTACTAAGCGGATCTCTACCCCCAAAGTTTGGCAAATGTGTCTCTATATTTGTATTGGAGCTAATTCTCAATCCTTTTCTAATACGGGTTCCCTTGTTACTTGCGTCAAGAACTTTTCTGAGAGTCGTGGTATTGTTCTCGGTATCTTGAAGGGCTACGTCGGACTGAGCGGCGCCATAATCACACAGCTCTTCCACGCATTTTACGGCAGCGACACCAAATCCTTAATTCTCCTCATCGGATGGCTCCCGGCGGCAATTTCCTGTGCATTTTTACGAACAATTCGTATTATGAAAGTCATTCGATATCCAAATGAGCTTAAAGTCTTCTACAATTTCCTCTACATTTCTCTTGGCCTCGCCGGATTTCTAATGATAATGATCATCGTAGAAAGCAAAACAGAGTTCACGCAAAATGAATATGGTGGCAGCGCTGCCGTCGTCCTCTTCCTCCTATTCCTCCCACTCGCTGTCGTCATCATCGAAGAATACAATCTATGGAAACTCAAAACGACCCTCATTAAATCTCCAAATCCCTCTGTTCAAATTGTAACAGAGCAACTCCCAAAAACAGAGCATCCGAAACAAGAACAAAAAGAACCATCTTGTTGGACAACTATTTTCAATCCACCAGAGCGCGGCGAGGATTTCACAATTCTCCAAGCTCTCTTCAGTGTCGACATGCTGATTCTATTCCTCTCTGCAATTTGCGGTGTCGGCGGAACGTTAACGGCGATCGACAATTTGGGTCAAATCGGAATGTCTTTGGGATACCCAAAAAGAAGCATTGGCACATTTGTAACATTAGTCAGCATTTGGAATTACCTCGGCCGAGTTGCCTCTGGTTTCGTCTCAGAAATCGTTTTGACAAAATACAAATTCCCCCGTCCTTTAATGCTCTCTCTAACCCTTCTTTTTTCCTGCGTTGGCCATTTGATGATCGCATTTGATGTCCCAAATGGGTTATACGTTGCTTCCATCGTAATTGGATTCAGCTTTGGAGCACAATGGCCAGTGATTTTCGCCATAATTTCAGAGCTTTTCGGGTTGAAATATTACTCAACGCTTTACAATTTTGGGTCAGTGGCGAGCCCAATTGGGCTTTATGTTCTGAATGTGAAAGTGGCTGGAAATTTCTACGATAGAGAGGCAGAGAAGCAACTAATTGCAAAAGGGATAATTAGAAAAGCAGGGGAAGAATTAAAGTGCTTTGGAGGGGAATGCTTTAAGCTTTCATTCATTGTAATCACTGGAGTTAGTTTGTTGGGTATGTTTGTTTCGTTGATTTTAGTGATTAGAACGAGGAGTTTTTACAAGAGTGATATTTATAAGAAGTTTCGAGATGAAGCTGAAAAGGAGGTTGTCGAGAATGGGGCTGTGGCGGCGGCGGGAGCAGCGGAAGAGACGAGAAAATGA 1743 43.32 MMAGRGISGCSNIWSIIVHVITGRWFAVFASLLIMATAGTVFMFSMYSNDIKFVLGYDQTTLNLLSFFKDLGGNVGILSGLISEITPPWVVLSIGAVLNFFGYFMIWLAITKRISTPKVWQMCLYICIGANSQSFSNTGSLVTCVKNFSESRGIVLGILKGYVGLSGAIITQLFHAFYGSDTKSLILLIGWLPAAISCAFLRTIRIMKVIRYPNELKVFYNFLYISLGLAGFLMIMIIVESKTEFTQNEYGGSAAVVLFLLFLPLAVVIIEEYNLWKLKTTLIKSPNPSVQIVTEQLPKTEHPKQEQKEPSCWTTIFNPPERGEDFTILQALFSVDMLILFLSAICGVGGTLTAIDNLGQIGMSLGYPKRSIGTFVTLVSIWNYLGRVASGFVSEIVLTKYKFPRPLMLSLTLLFSCVGHLMIAFDVPNGLYVASIVIGFSFGAQWPVIFAIISELFGLKYYSTLYNFGSVASPIGLYVLNVKVAGNFYDREAEKQLIAKGIIRKAGEELKCFGGECFKLSFIVITGVSLLGMFVSLILVIRTRSFYKSDIYKKFRDEAEKEVVENGAVAAAGAAEETRK 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1111654 1114039 + Lsi04G000970.1 Lsi04g00097 660146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi04g00097 580 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 572 - -
Lsi04g00097 580 SUPERFAMILY MFS general substrate transporter 27 549 IPR036259 -
Lsi04g00097 580 Pfam Nodulin-like 24 269 IPR010658 -
Lsi04g00097 580 CDD MFS_Mch1p_like 23 533 - -
Lsi04g00097 580 Gene3D MFS general substrate transporter like domains 333 548 IPR036259 -
Lsi04g00097 580 PANTHER MFS TRANSPORTER 10 572 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Lsi04g00097 Lsi08g00691 CCT
Lsi04g00097 Lsi08g00691 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g00145 Lsi-Chr3:2070230 Lsi04g00097 Lsi-Chr4:1111654 1.66E-179 dispersed
Lsi04g00097 Lsi-Chr4:1111654 Lsi08g00691 Lsi-Chr8:15212551 0 dispersed
Lsi04g00099 Lsi-Chr4:1126070 Lsi04g00097 Lsi-Chr4:1111654 0 dispersed
Lsi04g00096 Lsi-Chr4:1102253 Lsi04g00097 Lsi-Chr4:1111654 0 tandem
Lsi04g00097 Lsi-Chr4:1111654 Lsi04g00098 Lsi-Chr4:1118750 2.23E-63 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi04g00097 - - csv:101204293 994.186