Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi04g00275 ATGAGGACAAAAAGAATGCCTACCATTAACCTAGATCAAATTCCAAGTTTTGAAGAACATGGTAATGGCTTTAATCAACATGACGTGTTGGTTGAGGAGATTGATGGCCTGATTAGAGTTTACGGAAATGGGTATGTGGAAAGACCCCAAATAGTTCCATGTGTCTCTAATGCATTGCCGCCAGAGCTCGGTGTTACTTCTTGGGATGTAGTTGTGGATAAACTGACCAACATTTGGGCTCGTTTCTATATTCCAACACAGTGCCAGGAGAAGCTGCCTTTGATTGTATATTTCCATGGAGGTGGGTTTTGTGTCGGCTCGGCCGCTTGGAGTTGCTACCATGAGTTCCTGGCTAAGCTATCTGCAAAAGCCGACTGTATAATTATGTCTGTGAATTATCGTTTGGCTCCAGAAAACCCTCTTCCAGCTCCTTATGAAGATGGATTAAAGACCCTTCAGTGGTTGAAACAAGTTGCTTTTGTAGGGGCCAAGCAGAATTGGTGGTCAAGATACTGCGACTTTACCAAAATCTACCTTAGTGGTGATAGTGCCGGTGGCAACATAGCCTTCAATGTAGCCGCCGGACTTGGTGGTAAGACCACTGCTTCTGGAGCTGTGGTCTTGAAGCCGTTAGTTGTTAAAGGTAACATTTTGATACAACCATTTTTTGGTGGAGAGTCAAGGACCAAGTCAGAGAAGTTTCTTGTCCAACCTCCTCGTTCGCCACTGACGTTGGCAGTTTCTGATACGTACTGGCGGTTGGCATTGCCTTCCGGGACAAACCGTGACCACCCATGGTGCAATCCTTCGGCAAAAGGATTGTTTAAGGTGGAGGATTTGAGGGTTTTGCCTAGTTTGATATGTATATCAGAATTGGACATATTGAAAGATAGGAACTTGGAGTTTTGCTCTGCTTTACATAGAGCCGGTAAGCTGATCAATTATGTGGTTTATGAAGGAGTTGGCCATGCGTTTCAGGTTCTGAACAAGTCACAACTCTCACAAACTCGGACCCTTGAAATGATTGATCATATCAAGGACTTCTTGTGTGCATAG 1056 44.41 MRTKRMPTINLDQIPSFEEHGNGFNQHDVLVEEIDGLIRVYGNGYVERPQIVPCVSNALPPELGVTSWDVVVDKLTNIWARFYIPTQCQEKLPLIVYFHGGGFCVGSAAWSCYHEFLAKLSAKADCIIMSVNYRLAPENPLPAPYEDGLKTLQWLKQVAFVGAKQNWWSRYCDFTKIYLSGDSAGGNIAFNVAAGLGGKTTASGAVVLKPLVVKGNILIQPFFGGESRTKSEKFLVQPPRSPLTLAVSDTYWRLALPSGTNRDHPWCNPSAKGLFKVEDLRVLPSLICISELDILKDRNLEFCSALHRAGKLINYVVYEGVGHAFQVLNKSQLSQTRTLEMIDHIKDFLCA 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2793420 2794475 - Lsi04G002750.1 Lsi04g00275 660324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi04g00275 351 Gene3D alpha/beta hydrolase 49 351 IPR029058 -
Lsi04g00275 351 SUPERFAMILY alpha/beta-Hydrolases 30 349 IPR029058 -
Lsi04g00275 351 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 177 189 IPR033140 -
Lsi04g00275 351 PANTHER CARBOXYLESTERASE 6-RELATED 20 349 - -
Lsi04g00275 351 Pfam alpha/beta hydrolase fold 95 326 IPR013094 GO:0016787
Lsi04g00275 351 PANTHER ARYLACETAMIDE DEACETYLASE 20 349 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g00275 Lsi-Chr4:2793420 Lsi07g00985 Lsi-Chr7:13442439 9.91E-131 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi04g00275 - - csv:101213887 698.738