Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi04g00298 ATGGCTTCCGAGAGTGGTTCCAGATCCAGTTCAGCGGCCGATTCATATATTGGAAGCTTGATAAGTTTAACTTCCAAGAGTGAGATTAGATACGAAGGTGTTCTTTACAACATCAACACCGAAGAGTCCAGTATCGGACTGAGAAATGTACGGTCATTTGGAACAGAAGGCAGAAAGAAGGATGGATCTCAAGTCCCACCAAGCGACAAAGTTTTTGAATACATCTTGTTCCGTGGAAGTGATATCAAGGATCTACAGGTAAAATCTTCTCCTCCTGTTCAGACTACATCCTTGATAAACAATGATCCAGCTATTATTCAGTCTCACTATCCTCGTCCAGCATCGACTTCTCCAAGCTTGCCTCCTCCTGTTAGTGGGCCTTTGCCTGATATTAATTCTCAGGCCATGCCAATGGGAATTCCTGTTTCTAATTTCCAGGGTGGGTTGCCTTTATATCAACCTGGAGGAAATGTAGGGTCTTGGGGAGCTTCTCCTACGCCACCTCCCCCAAATCCAAGTGGTGGTGGGCTTGCTTTGCCAATGTACTGGCAAGGGTATTATGGCCCCCCTAATGGACTTCCTCATATGCATCAGCAGTCATTACTTCGTCCACCACCTGGCCTGTCATTGCCTTCTTCCTTGCAGCAGCCACTGCAATATCCTAATCTTAATGCTTCTTTACCCACTGGCGCAACAAATTTATTAGAAGTTCCATCTTCTTTATTCTCTGCTAATCCTACCACTCCTAGTCTACCATCCGCAGCAATGCCACCAGTAACTGTATCTTCGACACTTCCATCTGTGCTTTCGGCTCCACAGACCTCTGAGATATCATCAAGCTCAGTGGCTAACAAGACAGTAAATTCTGCTCTTCCTCAAGCTCCTCTAAGTACCAACTTGCCATCACTCTCTCCTTTGACGGCAAGTTCAGATGTCAGTCCTGTTGTGCCTCCAACTACTAACAATACTACTACAGTTTCTGGTCCAGCATTGTCTTATCAAACCGTCTCTCAATCTACATCCTCTGTTGTTGGAACATCGAACTCTGTTCTCACAGGTGCACCTGCACCTACCCTTGTGACTCCAGGACAGCTGTTGCAAACTACTGTAGCCTCTTCATCTTTGCAAACAGTTCAAAAAGACGTTGAAGTAGTTCAAACATCTTCCTCATTAGCAGCCGAACAAACTGTTCCAGCAGCAGATACTCAGCCACCACTATTACCATTACCGGCATCTTCAGGGCCTATTCATAAGCCAAATGGTTCAACTTCACAAACTCGGTACATCTACAGGGGACGTGGTAAAGGAAGACGATTTGGGAACTCACATCAAACAGAAAGATTTACGGAAGATTTTGACTTCATGGCAATGAATGAGAAATTTAACAAGGATGAAGTCTGGGGTCATCTTGGCAAGAATACCAAATCTCATCCAAAGTACACTGATGGGGATGAAAAGTTCAGTGATGAAGATGATGTCTATGAAGAAGACGATGGTGAATCGTCAAAGTTAGAGATCAAGCCTGTGTACAATAAGGACGACTTTTTTGATACTCTCTCGTGCAACAATCCTGTCAATGAAGCTCAAAATGGAAGGAGAACCAGATACTTCGAACAAATCAAGTTGGACACTGAGACATTTGGTGAATTTGCAAGATTCCGAGGTGGTCGTGGTGGTTTTGCTTCTGGACGTGGTGGCCGTCGTGGTGGTTATTACAGGAGAGGATATGGCCATGTTGGAAGGGGTCGAGGGCGGGGAATGCATAACTATAATCCCCTACCTACCACTGTACTCTTGGCTGAGCCAAGATCGTTGAGCTGCAGGCCGCCTTTCTCTGTTCCCATGGCCGCAGCATTGCCCTCACTGACCCCATTACTCATCTTTGCCAGAATCTTTGGTCTGCTTGTGGCCGTTCTGGTCTTCGTTTGGGCTTTTGCATTCAGTTCCAGCTTCGGCCATCCCTCCCCTGCCCGTGACGACCATCTCTTCGACGTTCTGCATCCTTTGTTCATGGTAATTGGTCTCATTCTCCTCAGCGGAGAAGCAATTTTGATCCATAGCTGGTTGCCTGGTTCGAGAAATTTGAGGAAATCTGTTCATCTGAGTCTTCAAGGGCTGGCTTTGGCTTCTGGGATTTCCGGAATTTGGACCAAGTTTCATTGGGATCGTGGCTTTTTGGCTAATTTCCACAGTTTACATTCTTGGATGGGTTTGATTGTTGTTATTTTGTTCGGAGCTCAGTGGATGATGGGGTTTCTGAGCTTCTGGCATTGGAGGGAGGTGAGGGCAACAAGAGAAAGAGTGCTGCCATGGCATGTGTTCCTTGGGTTATACAGTTATGCATTGGCAGTGGTAACAGCAGAAACAGGGCTTCTTGAGAAGTTGACATCGTTGCAAACCAAGAGAAATGTCCCTAGGAAAGGTCCTGAAGCCATGGTTGTAAACAGTTTAGGCTTGGCATTGGCTTTGCTTACTGGAATGGTGATGCTCACTGCTATATCTCCTAAATATCCTCCTTCCCTCCCCACCACCAAACAACCATTTTTCTCAAATTCAAAGCCCTTACCTTCTTAA 2574 45.84 MASESGSRSSSAADSYIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKDGSQVPPSDKVFEYILFRGSDIKDLQVKSSPPVQTTSLINNDPAIIQSHYPRPASTSPSLPPPVSGPLPDINSQAMPMGIPVSNFQGGLPLYQPGGNVGSWGASPTPPPPNPSGGGLALPMYWQGYYGPPNGLPHMHQQSLLRPPPGLSLPSSLQQPLQYPNLNASLPTGATNLLEVPSSLFSANPTTPSLPSAAMPPVTVSSTLPSVLSAPQTSEISSSSVANKTVNSALPQAPLSTNLPSLSPLTASSDVSPVVPPTTNNTTTVSGPALSYQTVSQSTSSVVGTSNSVLTGAPAPTLVTPGQLLQTTVASSSLQTVQKDVEVVQTSSSLAAEQTVPAADTQPPLLPLPASSGPIHKPNGSTSQTRYIYRGRGKGRRFGNSHQTERFTEDFDFMAMNEKFNKDEVWGHLGKNTKSHPKYTDGDEKFSDEDDVYEEDDGESSKLEIKPVYNKDDFFDTLSCNNPVNEAQNGRRTRYFEQIKLDTETFGEFARFRGGRGGFASGRGGRRGGYYRRGYGHVGRGRGRGMHNYNPLPTTVLLAEPRSLSCRPPFSVPMAAALPSLTPLLIFARIFGLLVAVLVFVWAFAFSSSFGHPSPARDDHLFDVLHPLFMVIGLILLSGEAILIHSWLPGSRNLRKSVHLSLQGLALASGISGIWTKFHWDRGFLANFHSLHSWMGLIVVILFGAQWMMGFLSFWHWREVRATRERVLPWHVFLGLYSYALAVVTAETGLLEKLTSLQTKRNVPRKGPEAMVVNSLGLALALLTGMVMLTAISPKYPPSLPTTKQPFFSNSKPLPS 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2998833 3009900 - Lsi04G002980.1 Lsi04g00298 660347

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi04g00298 857 CDD LSm14_N 16 87 IPR025609 -
Lsi04g00298 857 SMART FDF_2 446 551 IPR019050 -
Lsi04g00298 857 Pfam Eukaryotic cytochrome b561 666 796 IPR006593 -
Lsi04g00298 857 Gene3D - 6 92 - -
Lsi04g00298 857 ProSiteProfiles Cytochrome b561 domain profile. 628 833 IPR006593 -
Lsi04g00298 857 Gene3D - 616 838 - -
Lsi04g00298 857 ProSiteProfiles DFDF domain profile. 440 476 IPR025762 -
Lsi04g00298 857 ProSiteProfiles FFD box profile. 508 523 IPR025761 -
Lsi04g00298 857 Pfam FDF domain 447 549 IPR019050 -
Lsi04g00298 857 Pfam Scd6-like Sm domain 16 89 IPR025609 -
Lsi04g00298 857 MobiDBLite consensus disorder prediction 468 486 - -
Lsi04g00298 857 SMART LSM14_2 10 110 IPR025609 -
Lsi04g00298 857 PANTHER SCD6 PROTEIN-RELATED 5 585 - -
Lsi04g00298 857 PANTHER PROTEIN DECAPPING 5-LIKE 5 585 - -
Lsi04g00298 857 SUPERFAMILY Sm-like ribonucleoproteins 15 92 IPR010920 -
Lsi04g00298 857 SMART 561_7 666 791 IPR006593 -
Lsi04g00298 857 CDD Cyt_b561_ACYB-1_like 660 799 - -
Lsi04g00298 857 MobiDBLite consensus disorder prediction 468 502 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi04g00298 K18749 LSM14, RAP55, SCD6; protein LSM14 - csv:101205721 857.44
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Lsi04g00298 Lsi09g00611 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g00225 Lsi-Chr3:2843153 Lsi04g00298 Lsi-Chr4:2998833 2.33E-53 transposed
Lsi04g01170 Lsi-Chr4:17040809 Lsi04g00298 Lsi-Chr4:2998833 2.42E-29 transposed
Lsi05g00005 Lsi-Chr5:72543 Lsi04g00298 Lsi-Chr4:2998833 5.95E-39 transposed
Lsi09g00711 Lsi-Chr9:8102080 Lsi04g00298 Lsi-Chr4:2998833 3.13E-34 transposed
Lsi04g00298 Lsi-Chr4:2998833 Lsi09g00611 Lsi-Chr9:6633908 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g247 Blo01g00476 . . . . . Bma14g01693 . Cmo04g01615 Cmo18g01071 . . Car04g01593 . Sed06g1855 Cpe09g00267 Cpe01g01755 Bhi07g01381 Tan04g0909 Cmetu10g0348 Lac13g0448 Hepe10g1862 . . Cla05g02337 Cam05g2511 Cec05g2535 Cco05g2578 Clacu05g2505 Cmu05g2367 Cre05g2484 Cone13ag0863 Cone19ag0863 . . Lsi04g00298 Csa05g02074 . Cme10g00301 . Blo11g00828 . . Bpe11g01686 . . . . . . Cma04g01995 . . Car15g01281 Cpe13g00029 . Bhi12g00822 . . . . . Lcy10g0875 Cla01g00562 Cam01g0585 Cec01g0577 Cco01g0601 Clacu01g0580 Cmu01g0551 Cre09g1956 Lsi09g00611 . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi02g01367 . 1 397 Chloroplast and Mitochondria Gene Families AT2G28800 63.7 6.6e-135 477.6
Lsi08g01627 . 63 427 Chloroplast and Mitochondria Gene Families AT2G28800 53.8 5.9e-99 358.2
Lsi08g00548 . 3 255 Chloroplast and Mitochondria Gene Families AT1G15820 81.2 2.6e-118 421.8
Lsi11g01355 . 46 314 Chloroplast and Mitochondria Gene Families AT3G27690 87.8 4.6e-143 504.2
Lsi10g01537 . 2 267 Chloroplast and Mitochondria Gene Families AT3G27690 78.8 2.4e-120 428.7
Lsi01g00172 . 2 265 Chloroplast and Mitochondria Gene Families AT3G27690 77.0 9.3e-120 426.8
Lsi01g00173 . 2 265 Chloroplast and Mitochondria Gene Families AT3G27690 77.0 9.3e-120 426.8
Lsi02g00880 . 43 307 Chloroplast and Mitochondria Gene Families AT3G27690 76.7 3.5e-119 424.9
Lsi03g01151 . 1 265 Chloroplast and Mitochondria Gene Families AT3G27690 77.2 7.8e-119 423.7
Lsi02g00879 . 2 246 Chloroplast and Mitochondria Gene Families AT3G27690 71.9 6.2e-108 387.5
Lsi05g00685 . 3 264 Chloroplast and Mitochondria Gene Families AT3G27690 67.6 7.6e-98 354.0
Lsi02g00878 . 5 166 Chloroplast and Mitochondria Gene Families AT3G27690 71.9 1.1e-64 243.8
Lsi04g00683 . 3 262 Chloroplast and Mitochondria Gene Families AT3G61470 80.5 4.1e-124 441.0
Lsi06g00351 . 56 247 Chloroplast and Mitochondria Gene Families AT3G61470 66.1 2.1e-80 295.8
Lsi06g01458 . 378 605 Chloroplast and Mitochondria Gene Families AT3G61470 51.3 4.8e-64 241.5
Lsi02g01721 . 1 198 Chloroplast and Mitochondria Gene Families AT3G54890 82.1 2.5e-90 328.6
Lsi03g02207 . 3 280 Chloroplast and Mitochondria Gene Families AT3G08940 85.3 1.3e-134 476.1
Lsi01g01533 . 3 284 Chloroplast and Mitochondria Gene Families AT3G08940 82.3 5.4e-133 470.7
Lsi06g00634 . 1 273 Chloroplast and Mitochondria Gene Families AT1G61520 85.3 1.9e-135 478.8
Lsi11g01355 . 50 314 Chloroplast and Mitochondria Gene Families AT2G05070 89.4 2.8e-144 508.1
Lsi10g01537 . 7 267 Chloroplast and Mitochondria Gene Families AT2G05070 79.7 2.2e-120 428.7
Lsi01g00172 . 5 265 Chloroplast and Mitochondria Gene Families AT2G05070 78.9 2.8e-120 428.3
Lsi01g00173 . 5 265 Chloroplast and Mitochondria Gene Families AT2G05070 78.9 2.8e-120 428.3
Lsi02g00880 . 46 307 Chloroplast and Mitochondria Gene Families AT2G05070 77.8 1.6e-118 422.5
Lsi03g01151 . 27 265 Chloroplast and Mitochondria Gene Families AT2G05070 84.1 2.7e-118 421.8
Lsi02g00879 . 5 246 Chloroplast and Mitochondria Gene Families AT2G05070 73.3 3.2e-108 388.3
Lsi05g00685 . 5 264 Chloroplast and Mitochondria Gene Families AT2G05070 68.8 4.0e-98 354.8
Lsi02g00878 . 6 166 Chloroplast and Mitochondria Gene Families AT2G05070 72.7 2.9e-64 242.3
Lsi11g01355 . 50 286 Chloroplast and Mitochondria Gene Families AT2G05100 89.5 1.6e-125 446.0
Lsi10g01537 . 7 239 Chloroplast and Mitochondria Gene Families AT2G05100 77.7 1.6e-101 366.3
Lsi01g00172 . 5 237 Chloroplast and Mitochondria Gene Families AT2G05100 76.5 1.6e-101 366.3
Lsi01g00173 . 5 237 Chloroplast and Mitochondria Gene Families AT2G05100 76.5 1.6e-101 366.3
Lsi02g00880 . 46 279 Chloroplast and Mitochondria Gene Families AT2G05100 76.1 1.7e-100 362.8
Lsi03g01151 . 8 237 Chloroplast and Mitochondria Gene Families AT2G05100 78.0 2.3e-100 362.5
Lsi02g00879 . 5 218 Chloroplast and Mitochondria Gene Families AT2G05100 71.1 1.4e-89 326.6
Lsi05g00685 . 5 236 Chloroplast and Mitochondria Gene Families AT2G05100 68.5 3.3e-83 305.4
Lsi02g00878 . 6 166 Chloroplast and Mitochondria Gene Families AT2G05100 72.7 1.2e-64 243.8
Lsi01g01533 . 3 167 Chloroplast and Mitochondria Gene Families AT2G40100 72.8 5.7e-67 250.8
Lsi03g02207 . 3 166 Chloroplast and Mitochondria Gene Families AT2G40100 69.2 6.5e-63 237.3
Lsi10g01537 . 1 267 Chloroplast and Mitochondria Gene Families AT1G29930 88.4 4.4e-137 484.2
Lsi01g00172 . 1 265 Chloroplast and Mitochondria Gene Families AT1G29930 88.4 1.1e-135 479.6
Lsi01g00173 . 1 265 Chloroplast and Mitochondria Gene Families AT1G29930 88.4 1.1e-135 479.6
Lsi02g00880 . 42 307 Chloroplast and Mitochondria Gene Families AT1G29930 85.8 2.1e-131 465.3
Lsi03g01151 . 4 265 Chloroplast and Mitochondria Gene Families AT1G29930 84.5 1.2e-126 449.5
Lsi02g00879 . 1 246 Chloroplast and Mitochondria Gene Families AT1G29930 82.0 1.6e-123 439.1
Lsi11g01355 . 52 314 Chloroplast and Mitochondria Gene Families AT1G29930 78.3 3.3e-116 414.8
Lsi05g00685 . 11 264 Chloroplast and Mitochondria Gene Families AT1G29930 67.5 3.5e-94 341.7
Lsi02g00878 . 4 167 Chloroplast and Mitochondria Gene Families AT1G29930 84.8 8.7e-77 283.9
Lsi10g01537 . 1 267 Chloroplast and Mitochondria Gene Families AT1G29920 88.1 1.7e-136 482.3
Lsi01g00172 . 1 265 Chloroplast and Mitochondria Gene Families AT1G29920 88.0 4.1e-135 477.6
Lsi01g00173 . 1 265 Chloroplast and Mitochondria Gene Families AT1G29920 88.0 4.1e-135 477.6
Lsi02g00880 . 42 307 Chloroplast and Mitochondria Gene Families AT1G29920 85.4 8.0e-131 463.4
Lsi03g01151 . 4 265 Chloroplast and Mitochondria Gene Families AT1G29920 84.5 1.6e-126 449.1
Lsi02g00879 . 1 246 Chloroplast and Mitochondria Gene Families AT1G29920 81.6 6.1e-123 437.2
Lsi11g01355 . 52 314 Chloroplast and Mitochondria Gene Families AT1G29920 77.9 1.9e-116 415.6
Lsi05g00685 . 34 264 Chloroplast and Mitochondria Gene Families AT1G29920 69.8 3.5e-94 341.7
Lsi02g00878 . 4 167 Chloroplast and Mitochondria Gene Families AT1G29920 84.2 3.3e-76 282.0
Lsi10g01537 . 1 267 Chloroplast and Mitochondria Gene Families AT1G29910 88.1 1.7e-136 482.3
Lsi01g00172 . 1 265 Chloroplast and Mitochondria Gene Families AT1G29910 88.0 4.1e-135 477.6
Lsi01g00173 . 1 265 Chloroplast and Mitochondria Gene Families AT1G29910 88.0 4.1e-135 477.6
Lsi02g00880 . 42 307 Chloroplast and Mitochondria Gene Families AT1G29910 85.4 8.0e-131 463.4
Lsi03g01151 . 4 265 Chloroplast and Mitochondria Gene Families AT1G29910 84.5 1.6e-126 449.1
Lsi02g00879 . 1 246 Chloroplast and Mitochondria Gene Families AT1G29910 81.6 6.1e-123 437.2
Lsi11g01355 . 52 314 Chloroplast and Mitochondria Gene Families AT1G29910 77.9 1.9e-116 415.6
Lsi05g00685 . 34 264 Chloroplast and Mitochondria Gene Families AT1G29910 69.8 3.5e-94 341.7
Lsi02g00878 . 4 167 Chloroplast and Mitochondria Gene Families AT1G29910 84.2 3.3e-76 282.0
Lsi08g00191 . 11 275 Chloroplast and Mitochondria Gene Families AT4G10340 80.1 1.5e-127 452.6
Lsi02g00880 . 82 295 Chloroplast and Mitochondria Gene Families AT4G10340 53.6 2.1e-57 219.5
Lsi01g00172 . 37 253 Chloroplast and Mitochondria Gene Families AT4G10340 52.5 6.1e-57 218.0
Lsi01g00173 . 37 253 Chloroplast and Mitochondria Gene Families AT4G10340 52.5 6.1e-57 218.0
Lsi10g01537 . 51 255 Chloroplast and Mitochondria Gene Families AT4G10340 54.1 8.0e-57 217.6
Lsi03g01151 . 49 253 Chloroplast and Mitochondria Gene Families AT4G10340 53.6 2.3e-56 216.1
Lsi11g01355 . 98 302 Chloroplast and Mitochondria Gene Families AT4G10340 52.6 2.9e-54 209.1
Lsi05g00685 . 46 252 Chloroplast and Mitochondria Gene Families AT4G10340 54.0 2.7e-52 202.6
Lsi10g01537 . 1 267 Chloroplast and Mitochondria Gene Families AT2G34420 88.4 2.8e-136 481.5
Lsi01g00172 . 1 265 Chloroplast and Mitochondria Gene Families AT2G34420 87.6 4.5e-134 474.2
Lsi01g00173 . 1 265 Chloroplast and Mitochondria Gene Families AT2G34420 87.6 4.5e-134 474.2
Lsi02g00880 . 42 307 Chloroplast and Mitochondria Gene Families AT2G34420 85.4 3.9e-130 461.1
Lsi03g01151 . 4 265 Chloroplast and Mitochondria Gene Families AT2G34420 84.9 2.4e-127 451.8
Lsi02g00879 . 1 246 Chloroplast and Mitochondria Gene Families AT2G34420 80.9 9.7e-121 429.9
Lsi11g01355 . 52 314 Chloroplast and Mitochondria Gene Families AT2G34420 77.2 6.5e-117 417.2
Lsi05g00685 . 34 264 Chloroplast and Mitochondria Gene Families AT2G34420 70.2 3.5e-94 341.7
Lsi02g00878 . 4 167 Chloroplast and Mitochondria Gene Families AT2G34420 84.2 2.1e-75 279.3
Lsi01g00172 . 1 265 Chloroplast and Mitochondria Gene Families AT2G34430 88.3 1.3e-136 482.6
Lsi01g00173 . 1 265 Chloroplast and Mitochondria Gene Families AT2G34430 88.3 1.3e-136 482.6
Lsi10g01537 . 1 267 Chloroplast and Mitochondria Gene Families AT2G34430 87.7 3.1e-135 478.0
Lsi02g00880 . 42 307 Chloroplast and Mitochondria Gene Families AT2G34430 86.1 1.7e-133 472.2
Lsi03g01151 . 4 265 Chloroplast and Mitochondria Gene Families AT2G34430 85.2 3.4e-129 458.0
Lsi02g00879 . 1 246 Chloroplast and Mitochondria Gene Families AT2G34430 81.2 1.6e-123 439.1
Lsi11g01355 . 80 314 Chloroplast and Mitochondria Gene Families AT2G34430 83.2 1.8e-114 409.1
Lsi05g00685 . 34 264 Chloroplast and Mitochondria Gene Families AT2G34430 71.0 3.5e-94 341.7
Lsi02g00878 . 4 167 Chloroplast and Mitochondria Gene Families AT2G34430 84.1 4.6e-78 288.1
Lsi03g02207 . 2 280 Chloroplast and Mitochondria Gene Families AT5G01530 86.8 1.6e-140 495.7
Lsi01g01533 . 2 284 Chloroplast and Mitochondria Gene Families AT5G01530 83.8 3.6e-137 484.6
Lsi05g00793 . 48 307 Chloroplast and Mitochondria Gene Families AT5G40810 94.2 2.8e-144 508.1
Lsi05g00793 . 1 307 Chloroplast and Mitochondria Gene Families AT3G27240 85.4 2.6e-149 525.0
Lsi10g01460 . 5 327 Chloroplast and Mitochondria Gene Families AT2G30160 75.6 3.5e-144 508.1
Lsi01g01574 . 9 311 Chloroplast and Mitochondria Gene Families AT2G30160 63.9 1.1e-110 396.7
Lsi10g01460 . 5 327 Chloroplast and Mitochondria Gene Families AT1G07030 76.1 2.2e-143 505.4
Lsi01g01574 . 5 311 Chloroplast and Mitochondria Gene Families AT1G07030 67.2 9.5e-118 420.2
Lsi02g02438 . 1 345 Chloroplast and Mitochondria Gene Families AT2G47490 68.2 3.9e-129 458.0
Lsi02g02438 . 11 332 Chloroplast and Mitochondria Gene Families AT1G25380 57.3 5.3e-101 364.8
Lsi02g00703 . 668 1218 Chloroplast and Mitochondria Gene Families AT4G21490 74.6 2.6e-243 838.2
Lsi10g00864 . 489 1044 Chloroplast and Mitochondria Gene Families AT4G21490 71.1 1.4e-233 805.8
Lsi11g01519 . 1 577 Chloroplast and Mitochondria Gene Families AT4G21490 64.7 7.1e-225 776.9
Lsi02g02919 . 5 186 Chloroplast and Mitochondria Gene Families AT1G17530 65.4 1.1e-62 236.5
Lsi06g00803 . 4 179 Chloroplast and Mitochondria Gene Families AT1G17530 59.0 1.9e-51 199.1
Lsi06g00803 . 12 183 Chloroplast and Mitochondria Gene Families AT3G04800 59.0 2.0e-51 199.1
Lsi02g02919 . 22 190 Chloroplast and Mitochondria Gene Families AT3G04800 55.0 8.9e-44 173.7
Lsi02g02919 . 15 190 Chloroplast and Mitochondria Gene Families AT1G72750 69.6 5.4e-65 244.2
Lsi06g00803 . 5 183 Chloroplast and Mitochondria Gene Families AT1G72750 58.8 3.6e-53 204.9
Lsi04g00298 CCT 615 854 Chloroplast and Mitochondria Gene Families AT1G26100 57.9 5.9e-69 257.7
Lsi03g00225 . 1 226 Chloroplast and Mitochondria Gene Families AT5G38630 70.5 1.0e-89 326.6
Lsi05g00005 . 23 218 Chloroplast and Mitochondria Gene Families AT4G25570 73.0 8.5e-83 303.9
Lsi09g00711 . 2 219 Chloroplast and Mitochondria Gene Families AT1G14730 52.8 4.9e-65 244.6
Lsi09g00822 . 9 370 Chloroplast and Mitochondria Gene Families AT5G14040 77.1 4.4e-159 557.8
Lsi06g01674 . 37 338 Chloroplast and Mitochondria Gene Families AT5G14040 86.1 2.5e-154 542.0
Lsi11g01295 . 31 312 Chloroplast and Mitochondria Gene Families AT5G14040 51.4 6.3e-81 298.1
Lsi05g00457 . 49 235 Chloroplast and Mitochondria Gene Families AT5G14040 64.2 1.5e-79 293.5
Lsi06g01674 . 32 338 Chloroplast and Mitochondria Gene Families AT3G48850 74.9 3.7e-139 491.5
Lsi09g00822 . 8 362 Chloroplast and Mitochondria Gene Families AT3G48850 68.1 4.7e-134 474.6
Lsi11g01295 . 31 312 Chloroplast and Mitochondria Gene Families AT3G48850 50.3 7.1e-82 301.2
Lsi05g00457 . 49 235 Chloroplast and Mitochondria Gene Families AT3G48850 62.1 5.0e-75 278.5
Lsi11g01295 . 34 311 Chloroplast and Mitochondria Gene Families AT2G17270 78.4 3.3e-128 454.9
Lsi03g00181 . 18 310 Chloroplast and Mitochondria Gene Families AT5G15640 77.0 1.3e-127 453.0
Lsi04g01400 . 12 345 Chloroplast and Mitochondria Gene Families AT5G26200 67.7 1.7e-125 446.0
Lsi02g02914 . 10 353 Chloroplast and Mitochondria Gene Families AT5G26200 58.7 1.0e-106 383.6
Lsi02g02914 . 10 357 Chloroplast and Mitochondria Gene Families AT1G72820 76.6 1.0e-149 526.6
Lsi04g01400 . 1 346 Chloroplast and Mitochondria Gene Families AT1G72820 68.2 1.5e-129 459.5
Lsi05g01196 . 1 223 Chloroplast and Mitochondria Gene Families AT4G25700 62.6 1.1e-69 260.0
Lsi09g00227 . 28 187 Chloroplast and Mitochondria Gene Families AT4G25700 53.5 6.7e-46 181.0
Lsi11g01501 . 123 301 Chloroplast and Mitochondria Gene Families AT4G03320 51.7 3.1e-56 215.7
Lsi05g00688 . 62 386 Chloroplast and Mitochondria Gene Families AT5G54290 70.6 4.8e-115 411.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001922 1 2 3 2 2 2 4 2 2 2 2 2 3 2 2 4 2 2 4 2 2 2 2 2 2 2 1 2 3 1 66
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi04g00298 Lsi_Chr04 FPKM 10.229605 11.811527 19.244802 16.171021 23.656057 19.375189 26.486115 6.338148 7.700235 9.36612