Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi04g00304 ATGCCATCGCCTCAGATCCTACCTATCACCCAGCCCCCTTCGTCGTCTCCATTTTCCTCCGGGGGCTCCGCCGCCAATTCGATTATGGCAACCACATCTACTGCCATAGACATAATGTTGCTTAAAGAAGACGATGAACAGAGGACTGGAGTTCTTGTTTCTCCGTTGTTTGAGGATGATAAGACGATAGCTCATAAGCCCCTTCTTCCTAGGACTTCAAGCTATGCCTCCTCCACATCCAGTTCCTCCTCAGGAAGCAATATGTACAAGCAGAAGCGGAGGCGAGTCAAGAGCGAAGACTTCTTGTCCTTTCTCTCCGGTGACGTCCGCCTCCAGACTGTTGATCATGATGTCGAGAATGCCGATGTTGTGAGAGCTGAGAGATTTCTACTGACCCGATTCGGTTTGAAACTCTCGAAATATATTCGGGTAGCATTCAGATGGATTGCAAGATTTCTGGCACTTGGTTGCTATTCATTGTTTCTTCTTCCAGGTTTTCTTCAAGATTCTTGTAGATTCCAATATTTATTTGTGCAATGTCAAGTGAAATTAACTGATATTTTCCACCCATTTGCTGGGGCGATCATGGTGAACTTTGGTACTTGCAGTTGGATACTATTATTTCTCATCCAGCCAGATACGCAGAAGTATACCCTATGGTTGGATCTTTATATTCCAAAACACATTGACGGGCCAAAACCAGTTGTTGCATTTATCACTGGTGGGGCTTGGATTATCGGCTATAAAGCTTGGGGTTGTCTTCTAGGACAACAATTATCAGAAAGAGATGTTATTGTAGCATGCATTGATTACAGAAATTTTCCTCAGGGAACTATGAGTGATATGATTGATGATGCTTCCCAAGGTATCTCGTTCTTGTGTAATAACATTAGAGAATTTGGAGGCGATCCAAACAGAATTTATCTAATGGGTCAGTCAGCTGGCGCACATATAGCTGCCTGCACACTTTTGGAGCACGCAATGAAAGAGGTTCGCAAAGTAGAAAGTATATCTTGGAGTGTGTCCCAGATCAAAGCTTATTTTGGTTTGTCAGGAGGGTATAATTTGCCCAATCTGATAGACTACTTTCACTCTCGAGGTCTATCTCGTTCTCTTTTTTTAAGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAAGTAATGATCTTGGAAGAACCCAACATAGGAGCAGCAGTCTCGATTCTTCCTCCCGTCATTTTATTCCATGGAACAGCAGACTATTCTATACCATCAGATGCTAGGTACATAGTTTTTGTAGCTGATCAAAAGCATACTAAAACTTTTGCTGAGGCTCTTCAAAGCGTTGGAGTGAATGCCGAAACATTTTTCTACGAAGGAAAGACACATACAGATGTATTTGTTCAGGATCCGTTGAGGGGTGGGAGAGATAAGATGTTTGAAGATCTCGTTGCGATCATCCATGCCAATGATGCAGAAGCACTAGCAAAAGATGCGGTGGCACCGCCAAGAAGACGCTTTGTACCTGAATTTATGTTGATGTTGGCTCGTAGTGTTAGCCCCTTCTAA 1557 43.16 MPSPQILPITQPPSSSPFSSGGSAANSIMATTSTAIDIMLLKEDDEQRTGVLVSPLFEDDKTIAHKPLLPRTSSYASSTSSSSSGSNMYKQKRRRVKSEDFLSFLSGDVRLQTVDHDVENADVVRAERFLLTRFGLKLSKYIRVAFRWIARFLALGCYSLFLLPGFLQDSCRFQYLFVQCQVKLTDIFHPFAGAIMVNFGTCSWILLFLIQPDTQKYTLWLDLYIPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERDVIVACIDYRNFPQGTMSDMIDDASQGISFLCNNIREFGGDPNRIYLMGQSAGAHIAACTLLEHAMKEVRKVESISWSVSQIKAYFGLSGGYNLPNLIDYFHSRGLSRSLFLSIMEGEQSLKRFSPEVMILEEPNIGAAVSILPPVILFHGTADYSIPSDARYIVFVADQKHTKTFAEALQSVGVNAETFFYEGKTHTDVFVQDPLRGGRDKMFEDLVAIIHANDAEALAKDAVAPPRRRFVPEFMLMLARSVSPF 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3067657 3072298 - Lsi04G003040.1 Lsi04g00304 660353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi04g00304 518 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 222 508 - -
Lsi04g00304 518 MobiDBLite consensus disorder prediction 1 25 - -
Lsi04g00304 518 PANTHER ARYLACETAMIDE DEACETYLASE 112 171 - -
Lsi04g00304 518 MobiDBLite consensus disorder prediction 72 89 - -
Lsi04g00304 518 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 112 171 - -
Lsi04g00304 518 Pfam BD-FAE 221 421 - -
Lsi04g00304 518 PANTHER ARYLACETAMIDE DEACETYLASE 222 508 - -
Lsi04g00304 518 ProSitePatterns Carboxylesterases type-B serine active site. 300 315 IPR019826 -
Lsi04g00304 518 SUPERFAMILY alpha/beta-Hydrolases 210 482 IPR029058 -
Lsi04g00304 518 Gene3D alpha/beta hydrolase 210 467 IPR029058 -
Lsi04g00304 518 MobiDBLite consensus disorder prediction 72 92 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g00304 Lsi-Chr4:3067657 Lsi09g01082 Lsi-Chr9:17186268 4.00E-138 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi04g00304 K15889 - csv:101206426 801.201