Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi04g00321 ATGGCGAGGTGCGAGAATTTCCGAGAAAGGATTTACGGGGATTTCGAAGCGACTTCAGATAGTAACAACCCGATATCGAAGTCGTATATTGAGAAGTTGAGGTCAATTTGCCACTTAGTTGGGAAAGCATCAGAGAACAACATAACAGCAATGGACAATATAACACCAGAGCTGTTTGACAATTCCTATTTTCACATGTTGATGAGAGGAGAAGGGGTTTTGAATTCAGACCAGCAATTGTATTCAAGCCTTCTGGGCATGGAAACCAAGGAATTGGTGAAGAAATATGCTGCTGATCCACTTGCTTTCTTTCAGCAATTCTCTGATTCCATGGTGAAGTTGGGAAATATTACCAATTCTGATAGCTTTTTCACTGGGGAAGTTAGGAAAAATTGCAGGTTTATTAACACATGA 414 40.34 MARCENFRERIYGDFEATSDSNNPISKSYIEKLRSICHLVGKASENNITAMDNITPELFDNSYFHMLMRGEGVLNSDQQLYSSLLGMETKELVKKYAADPLAFFQQFSDSMVKLGNITNSDSFFTGEVRKNCRFINT 137
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3287127 3287540 - Lsi04G003210.1 Lsi04g00321 660370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi04g00321 137 ProSiteProfiles Plant heme peroxidase family profile. 1 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi04g00321 137 Pfam Peroxidase 2 99 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi04g00321 137 Gene3D Peroxidase, domain 2 2 117 - -
Lsi04g00321 137 Gene3D - 118 136 - -
Lsi04g00321 137 PRINTS Plant peroxidase signature 50 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi04g00321 137 PRINTS Plant peroxidase signature 66 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi04g00321 137 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi04g00321 137 SUPERFAMILY Heme-dependent peroxidases 2 136 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lsi04g00321 137 PANTHER PEROXIDASE 11 1 135 - -
Lsi04g00321 137 PANTHER PEROXIDASE 72-RELATED 1 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g00321 Lsi-Chr4:3287127 Lsi03g00276 Lsi-Chr3:3387980 2.36E-23 dispersed
Lsi04g00321 Lsi-Chr4:3287127 Lsi01g00641 Lsi-Chr1:5166953 1.38E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi04g00321 K00430 - csv:101216779 246.514