Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi04g00829 ATGTTCACTTCTTCCCTTCTTTCTTTGCTGTATGAGAAAATGGAGGGTATTTTCACCTTTTGTTTTGTGTGGGAAAGAGCTTTTCAGGAAGTGCTTCCTCCAGCCCTCACTTCATCTTCAGAACCACCTCCTATCTTTGATGGAACAACGAGGCTTTACATATCTTATACATGCCCTTATGCGCAGCGTGTGTGGATTACTCGGAACTGTAAGGGTTTGCAGAATAAGATACAATTGGTTCCAATAAATCTACAAGATAGGCCTTCTTGGTACAAGGAAAAACTTTACCCACCTAACAAGGTGCCAGCTCTTGAACATAATAATGAAGTCAAAGGAGAGAGTCTTGACTTAATTAAATATATTGACAGCAATTTTGAAGGACCTTCATTATTTCCTGATGATTCAGAAAAGAGAGAGATTGCTGAAGAGTTGATAAACTACGTGAATTCTTTCACTGGATCTGTGGTTTCTTCATTTAAAGGAGATGGAAATGAAGCTGATGTGGCGTTTGACCACATCGAATCCGCTCTTTCAAAATATGGAGATGGCCCATTTTTTCTAGGCCAGTTTAGTCTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTTTCAGCCGTTCTTATTGGAAGTAAAAACATATGACATCACTGCTGGCAGGCCAAAACTAGCAGCTTGGATTGAGACCAGACTAAAAGAAGGCAAAGATCATGGCAATTGGACACTGGGGAGGGATGAGATGAACAAGATCGAGGGGTACCGACAAACAAGGGGCGATCCACAGGAACATGTTGATAGCTTTAAGAAGCGATTCTTGATGGATTATTGA 828 40.82 MFTSSLLSLLYEKMEGIFTFCFVWERAFQEVLPPALTSSSEPPPIFDGTTRLYISYTCPYAQRVWITRNCKGLQNKIQLVPINLQDRPSWYKEKLYPPNKVPALEHNNEVKGESLDLIKYIDSNFEGPSLFPDDSEKREIAEELINYVNSFTGSVVSSFKGDGNEADVAFDHIESALSKYGDGPFFLGQFSLVDIAYAPFIERFQPFLLEVKTYDITAGRPKLAAWIETRLKEGKDHGNWTLGRDEMNKIEGYRQTRGDPQEHVDSFKKRFLMDY 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8002650 8008050 - Lsi04G008290.1 Lsi04g00829 660878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi04g00829 275 Pfam Glutathione S-transferase, N-terminal domain 52 128 IPR004045 -
Lsi04g00829 275 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 48 129 IPR004045 -
Lsi04g00829 275 SFLD Glutathione Transferase (cytosolic) 52 229 IPR040079 -
Lsi04g00829 275 Pfam Glutathione S-transferase, C-terminal domain 169 228 - -
Lsi04g00829 275 SUPERFAMILY Thioredoxin-like 38 130 IPR036249 -
Lsi04g00829 275 PANTHER GLUTATHIONE S-TRANSFERASE L1 26 272 IPR044629 GO:0004364
Lsi04g00829 275 SUPERFAMILY GST C-terminal domain-like 125 230 IPR036282 -
Lsi04g00829 275 Gene3D - 127 275 - -
Lsi04g00829 275 Gene3D Glutaredoxin 25 126 - -
Lsi04g00829 275 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 26 272 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g02067 Lsi-Chr3:31986884 Lsi04g00829 Lsi-Chr4:8002650 1.22E-71 dispersed
Lsi04g00829 Lsi-Chr4:8002650 Lsi05g01792 Lsi-Chr5:25252352 5.60E-06 dispersed
Lsi03g02066 Lsi-Chr3:31980418 Lsi04g00829 Lsi-Chr4:8002650 6.77E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi04g00829 K00799 - csv:101220995 436.802