Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi04g00924 | ATGGGCACATTTGCTCCAGAAGCTCTACTCCACAGCTACAAAAGAAGTTTCAATGGATTCGTGGTGAAGCTTACCGAAGAAGAAGCTCAAAAGATTTCTGCTAAGGAGGGTGTTGTCTCTGTGTTTCCAAATGGAAAGAAACATCTTCATACAACAAGATCATGGGATTTCATGGGGTTTACTAAAAATGTTCCTCGTGTAAAGCAAGTTGAAAGCAACATAGTTGTCGGAGTTTTGGACTCTGGAATATGGCCAGAGTCTCCTAGCTTTAGTGATGTAGGCTATGGCCCTCCACCCGCTAAATGGAAGGGCACCTGCCAAACTTCTGCCAACTTTCGGTGTAATAGAAAAATCATTGGAGCTCGAGCATATCGTAGCGACAATTTTTTTCCTCCGGAAGATATTAAAAGTCCAAGAGATTCAGACGGTCATGGGACACACACTGCATCGACAGTAGCGGGTGGTCTCGTCAATCAAGCAAGTTTGTACGGTCTTGCACTCGGCACAGCTAGAGGAGGGGTTCCTTCTGCACGTATTGCTGTGTACAAGATATGTTGGTCCGATGGGTGCTACGATGCTGACATTCTTGCTGCATTCGATGACGCAATCGCCGACGGTGTCGATATCATATCTCTTTCAGTTGGTGGGAACAAACCCAAATTTTGCTCCAAAAACTCAGTGGATCGCAACATGGTGAAGGGAAAAATCCTTCTTTGTGACTCTATATTGGCCCCTGCAACATTTGCTTCCTTCAATGGCGCAGTGGGTGTTGTTATGAATGATGCTGGGGTGAAGGATAATGCAAGATCCTATCCCTTGCCTTCCTCCTACCTCGACACGGTGGCCGGTGCCAACCCGGATTTGACTGCCCCAGGAGTTGAAATTCTTGCTGCATGGTCTCCAATCGCATCGGTCTCCAGCGGAGTTAGAGATTCGAGGACGACGCTCTATAATATAATCTCGGGAACATCGATGTCTTGCCCACATGCCACTGCAGCTGCTGTGTATGTGAAAACATTCCATCCCACGTGGTCTCCCGCTGCCATTAAATCAGCTCTCATGACAACCGCAACTCCCTTGAATGTCAAGCTCAATCCTCAAGCAGAGTTTGCATATGGGTCTGGCCACATCAACCCACTCAAGGCAGTACATCCAGGATTGTTGTACGATGCATACGAAAGCGATTACGTTAGATTCTTGTGTGGCCAAGGTTACACCACCGCCATGGTTCGCCGCCTCTCAGGCGACAACAGTGCTTGTACTCGTGCCAACTCCGGCCGAGTTTGGGATCTAAACTATCCTTCCTTTGCCCTTTCTTCGACCAATCCACAATCCTTCAACCAATTCTTCACAAGAACTGTCACAAACGTTGGCTCGAAAGTTTCGACATATAGAGCTAAGGTTGTTGGCGCCCCACGAGGCCTTACAATCACAGTGAACCCTCCGGTTCTGTCATTCAATGCCATTGGACAGAAGAAATCTTTCACATTGACAATTCGTGGATCTGTCAGTCAATCCCTAGTCTCTGCTTCATTGGTGTGGACCGATGGTTATCACAATGTGAGAAGCCCTATCACAGTATTTGTTGTGGATACAGCTTAA | 1602 | 47.25 | MGTFAPEALLHSYKRSFNGFVVKLTEEEAQKISAKEGVVSVFPNGKKHLHTTRSWDFMGFTKNVPRVKQVESNIVVGVLDSGIWPESPSFSDVGYGPPPAKWKGTCQTSANFRCNRKIIGARAYRSDNFFPPEDIKSPRDSDGHGTHTASTVAGGLVNQASLYGLALGTARGGVPSARIAVYKICWSDGCYDADILAAFDDAIADGVDIISLSVGGNKPKFCSKNSVDRNMVKGKILLCDSILAPATFASFNGAVGVVMNDAGVKDNARSYPLPSSYLDTVAGANPDLTAPGVEILAAWSPIASVSSGVRDSRTTLYNIISGTSMSCPHATAAAVYVKTFHPTWSPAAIKSALMTTATPLNVKLNPQAEFAYGSGHINPLKAVHPGLLYDAYESDYVRFLCGQGYTTAMVRRLSGDNSACTRANSGRVWDLNYPSFALSSTNPQSFNQFFTRTVTNVGSKVSTYRAKVVGAPRGLTITVNPPVLSFNAIGQKKSFTLTIRGSVSQSLVSASLVWTDGYHNVRSPITVFVVDTA | 533 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 9472654 | 9479077 | + | Lsi04G009240.1 | Lsi04g00924 | 660973 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi04g00924 | 533 | Gene3D | Peptidase S8/S53 domain | 285 | 396 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi04g00924 | 533 | Gene3D | Peptidase S8/S53 domain | 73 | 219 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi04g00924 | 533 | Pfam | Peptidase inhibitor I9 | 6 | 50 | IPR010259 | - | |
Lsi04g00924 | 533 | CDD | Peptidases_S8_3 | 47 | 358 | IPR034197 | - | |
Lsi04g00924 | 533 | Pfam | Subtilase family | 72 | 375 | IPR000209 | GO:0006508|GO:0008236 | |
Lsi04g00924 | 533 | PANTHER | PUTATIVE-RELATED | 285 | 528 | - | - | |
Lsi04g00924 | 533 | PANTHER | PUTATIVE-RELATED | 5 | 218 | - | - | |
Lsi04g00924 | 533 | SUPERFAMILY | Subtilisin-like | 52 | 384 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi04g00924 | 533 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 54 | 383 | - | - | |
Lsi04g00924 | 533 | PANTHER | PUTATIVE-RELATED | 219 | 284 | - | - | |
Lsi04g00924 | 533 | Pfam | Fibronectin type-III domain | 430 | 527 | IPR041469 | - | |
Lsi04g00924 | 533 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 285 | 528 | IPR045051 | - | |
Lsi04g00924 | 533 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 5 | 218 | IPR045051 | - | |
Lsi04g00924 | 533 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 322 | 332 | IPR023828 | - | |
Lsi04g00924 | 533 | PRINTS | Subtilisin serine protease family (S8) signature | 140 | 153 | IPR015500 | - | |
Lsi04g00924 | 533 | PRINTS | Subtilisin serine protease family (S8) signature | 71 | 90 | IPR015500 | - | |
Lsi04g00924 | 533 | PRINTS | Subtilisin serine protease family (S8) signature | 321 | 337 | IPR015500 | - | |
Lsi04g00924 | 533 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 219 | 284 | IPR045051 | - | |
Lsi04g00924 | 533 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 2 | 50 | IPR037045 | - | |
Lsi04g00924 | 533 | Gene3D | - | 400 | 529 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi04g00917 | Lsi-Chr4:9281448 | Lsi04g00924 | Lsi-Chr4:9472654 | 1.06E-103 | dispersed | |
Lsi04g00922 | Lsi-Chr4:9396647 | Lsi04g00924 | Lsi-Chr4:9472654 | 9.06E-165 | dispersed | |
Lsi04g00924 | Lsi-Chr4:9472654 | Lsi04g00918 | Lsi-Chr4:9334334 | 6.69E-96 | dispersed | |
Lsi04g00923 | Lsi-Chr4:9432713 | Lsi04g00924 | Lsi-Chr4:9472654 | 6.94E-98 | tandem | |
Lsi04g00924 | Lsi-Chr4:9472654 | Lsi04g00925 | Lsi-Chr4:9510161 | 3.27E-82 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi04g00924 | - | - | csv:101215626 | 555.444 |