Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi04g00925 | ATGAATGAAGTTGTATCTGTGTTTCCAAGTGAAAAAAAACAGCTTCATACCACAAGATCATGGGATTTCATGGGTTTCTTCCAACAAACTCGTAGAACCAACTTGGAGTCCGATTTGGTCGTCGGAATGTTGGATACTGGGATTTGGCCGGAATCTCAAAGCTTTTCCGATGAAGGCTTTGGCCCGCCGCCGCTTAAATGGAAAGGCCAATGCCAACCCTTTTCCAATTTCACCTGCAACAATAAAATAATCGGAGCTCGATTCTTCCGGAGCGAGCCTCTCACCGGAGCCGATATTCTTTCTCCGAGAGATACAGAAGGCCATGGAACCCACACTTCCTCCACCGCTGCTGGTAATTTTGTATCCAGCGCCAGCCTCTCGGGCCTCGCCGTCGGCACCGCTCGGGGCGGCGTTCCCTCCGCTCGCATCGCCGTCTACAAGATCTGCTGGTCCGATGGTTGCTTCGACGCTGACATCCTCGCAGCTTTCGACAGTGCAATCGCTGATAGAGTCGATATCATCTCCATTTCCGTCGGAGGTTTTATCGCCAAGAATTACTTCAACGATTCAATCGCTATTGGGGCTTTTCACGCAATGAAGAATGGGATTTTGACTTCAAATTCCGGTGGCAATTCTGGCCCTAGCCTTGGTAGTATCACGAATGTTTCTCCATGGTCGTTATCGGTGGCTGCTAGCACCATCGATAGGAAGTTTGTGACTAATGTGAAGTTGGGTAATGGAGAATCCTTTCAGGGGATCTCTGTGAACACCTTCCAACTTGGAGATGAGTTATTTCCACTTATATATGCTGGCGATGCTCCTAATATAACTGCAGGTTTCAATGGATCATTATCAAGGTTCTGCTTCCCAGGTTCTTTGGACGTGGACAAAGTTCAGGGGAAGATTGTTTTATGCGATGAGATTGGTGACGGAGAACCAGCTTTGAGCAGTGGTGCGGTTGGTACAATAATGCAAGATGATAGCCACCAAGATGTTGCCTTTCTTTTCCCCCTACCTGTTTCCTTGATAGACTTGAACGCTGGAAAGAATGTTTTCCAATACCTGAGATCAACCAGCAATCCGGTAGCTACCATAGAAAAGAGTACTACCATTGAGGATCTGTCAGCTCCATCTGTAGTTTCCTTCTCATCAAGGGGTCCTAATATAGTTACGCTGGACATTCTCAAGCCTGATTTGGCAGCACCAGGAGTGGATATACTAGCATCTTGGTCTGAAGGCACAACGATCACAGGTTTAGAAGGGGATAACCGAATAGCTCCATTTAACATAATCTCTGGCACATCCATGGCTTGCCCACATGCAACAGGAGCAGCTGCCTATGTCAAATCCTTCCACCCAACTTGGTCTCCAGCTGCTATTAAGTCAGCACTTATGACAACTGCTTTTCCCATGACTCCAAAGTTAAACACGGATGCTGAGTTTGCATATGGAGCAGGTCACTTAAATCCAGTTAATGCCATTAACCCCGGTTTAGTCTATGATGCTGAAGAGCTTGACTACATAAAGTTCTTATGTGGGCAAGGACATAGTGCTGAAAATCTTCATCTTGTTACCGGTGACCAAAGCAACTGTTCGGGTGTTACAAAAACAGCTGCATCAGATCTAAACTATCCATCTGTTGCTCTAGTGATCAACTCTCCAAGTCGAAGATTGATTCGTCGTGTCTACCACAGGACTGTCACAAATGTCGGGTTGCCAGTGTCAACTTATAAACCAGTTATTCAAGTTCCACCCGGGCTCAAAGTTGCAGTACGTCCTGCTACTCTTTCTTTCCGTTCTCTTGGACAAAAGATATCCTTCACTGTGACTGTGACGGCTAAAGCAGAAGTTGGTGGAAAGATGCTTTCTGGTAGCTTAACCTGGGATGATGGAGTGCATCTGGTGAGGAGCCCCATTGTTGCATTTGTTATTCCATCATCATAA | 1944 | 46.4 | MNEVVSVFPSEKKQLHTTRSWDFMGFFQQTRRTNLESDLVVGMLDTGIWPESQSFSDEGFGPPPLKWKGQCQPFSNFTCNNKIIGARFFRSEPLTGADILSPRDTEGHGTHTSSTAAGNFVSSASLSGLAVGTARGGVPSARIAVYKICWSDGCFDADILAAFDSAIADRVDIISISVGGFIAKNYFNDSIAIGAFHAMKNGILTSNSGGNSGPSLGSITNVSPWSLSVAASTIDRKFVTNVKLGNGESFQGISVNTFQLGDELFPLIYAGDAPNITAGFNGSLSRFCFPGSLDVDKVQGKIVLCDEIGDGEPALSSGAVGTIMQDDSHQDVAFLFPLPVSLIDLNAGKNVFQYLRSTSNPVATIEKSTTIEDLSAPSVVSFSSRGPNIVTLDILKPDLAAPGVDILASWSEGTTITGLEGDNRIAPFNIISGTSMACPHATGAAAYVKSFHPTWSPAAIKSALMTTAFPMTPKLNTDAEFAYGAGHLNPVNAINPGLVYDAEELDYIKFLCGQGHSAENLHLVTGDQSNCSGVTKTAASDLNYPSVALVINSPSRRLIRRVYHRTVTNVGLPVSTYKPVIQVPPGLKVAVRPATLSFRSLGQKISFTVTVTAKAEVGGKMLSGSLTWDDGVHLVRSPIVAFVIPSS | 647 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 9510161 | 9515635 | + | Lsi04G009250.1 | Lsi04g00925 | 660974 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi04g00925 | 647 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 433 | 443 | IPR023828 | - | |
Lsi04g00925 | 647 | PRINTS | Subtilisin serine protease family (S8) signature | 36 | 55 | IPR015500 | - | |
Lsi04g00925 | 647 | PRINTS | Subtilisin serine protease family (S8) signature | 432 | 448 | IPR015500 | - | |
Lsi04g00925 | 647 | PRINTS | Subtilisin serine protease family (S8) signature | 104 | 117 | IPR015500 | - | |
Lsi04g00925 | 647 | Gene3D | Peptidase S8/S53 domain | 38 | 507 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi04g00925 | 647 | Pfam | Subtilase family | 37 | 486 | IPR000209 | GO:0006508|GO:0008236 | |
Lsi04g00925 | 647 | CDD | Peptidases_S8_3 | 13 | 468 | IPR034197 | - | |
Lsi04g00925 | 647 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 3 | 643 | IPR045051 | - | |
Lsi04g00925 | 647 | Pfam | Fibronectin type-III domain | 541 | 640 | IPR041469 | - | |
Lsi04g00925 | 647 | Gene3D | - | 511 | 643 | - | - | |
Lsi04g00925 | 647 | Gene3D | - | 235 | 372 | - | - | |
Lsi04g00925 | 647 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 20 | 494 | - | - | |
Lsi04g00925 | 647 | PANTHER | PUTATIVE-RELATED | 3 | 643 | - | - | |
Lsi04g00925 | 647 | CDD | PA_subtilisin_like | 241 | 365 | - | - | |
Lsi04g00925 | 647 | SUPERFAMILY | Subtilisin-like | 15 | 498 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi04g00918 | Lsi-Chr4:9334334 | Lsi04g00925 | Lsi-Chr4:9510161 | 0 | dispersed | |
Lsi04g00919 | Lsi-Chr4:9370053 | Lsi04g00925 | Lsi-Chr4:9510161 | 0 | dispersed | |
Lsi04g00925 | Lsi-Chr4:9510161 | Lsi09g00086 | Lsi-Chr9:764376 | 0 | dispersed | |
Lsi04g01158 | Lsi-Chr4:16550162 | Lsi04g00925 | Lsi-Chr4:9510161 | 6.55E-157 | dispersed | |
Lsi04g00924 | Lsi-Chr4:9472654 | Lsi04g00925 | Lsi-Chr4:9510161 | 3.27E-82 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi04g00925 | - | - | bhj:120081032 | 1193.33 |