Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi04g01155 | ATGCTGCAAACAATGGGGTTAAGAGAAGTGTTGCTGTTTTTGTCAATAACAATACTTGCAACTTCAAGTGCTGCTATGGATCAACAAACTTACATAATTCACATGGACACCACAAAGATGGCCACCACCAACAACCCTGAAAAATGGTACACAGCCATGATTGATTCACTCAATGAACTCTCGTCTCTGGATGACGAAAACAATGAAGAAGAAGCATCAAACCCTGCCGAGATTCTCTACGTCTACAAAACTACCATTTCAGGCAAGATTCTAAATATCAATCACCTTGATTCATTTTCAGGTTTTGCTGCAAAGCTCTCCACAAAAAACCTCCATTCTTTAAGCAAAATGCCTGGCTTTCTAGCAGCCACTCCAAATGAACTACTACAACTTCACACCACTTACTCCCCTCAGTTTCTGGGCCTACAAAGAGGCCATGGCCTTTGGAATTCCTCAAACTTAGCCTCTGATATAATTATTGGTTTGCTTGACACTGGTGTTTGGCCTGAGCATATAAGTTTTCGGGACAAGGGTCTGCCTCCTGTGCCCTCAAAATGGAAAGGCATTTGTCAAGTAGGCCCAAAGTTCTCACCTTCAAATTGTAACAAAAAGCTCATTGGAGCAAGAGCCTACATTAAAGGCTATGAGGCCGTCATCGGTAGATTGAACACAACAGGGACGTTTCGATCACCCCGAGACTCGGATGGTCACGGGACACACACGGCATCAACTGCTGCTGGAAATTCTGTAAACAGAGCAAGCTTTTATAGCCAAGGGATGGGAGTAGCCACTGGAATGAGGTTCACTTCAAGGATTGCAGCATACAAGGTATGTTGGCCAGAAGGGTGTGCCAGTGCCGATATTTTGGCAGCCATGGATCACGCCGTTGCCGACGGTGTTGATGTTCTATCAATCTCCTTGGGCGGTGGTTCTGGTATTTTTTACAGCGATGAAATCGCGATAGCTGCATTTGGGGCTATTCAAAATGGGGTTTTTGTGTCATGTTCAGCTGGTAATTCTGGCCCATTTATCTCAACTGTTGGTAATGTAGCACCATGGATCATGACAGTTGCTGCTAGTTACACTGATAGAACCTTCCCAACCACTATAAAGCTTGGAAATGGAAAAGTTTTTGAAGGCTCTTCTTTGTATTTTGGCAAGAACTTGAATGCACTCCCACTTTTTTATAACAATACTGCTGGTTATGGACAAGAAACAAATCTTTGCACTGCTGGTTCACTTGTCCCATCAATGGTAAAGGGAAAATTTGTTGTATGTGAAAGAGGAACAAACTCAAGAACTGAAAAAGGAGAGCAAGTGAAATTAGCTGGTGGAGCTGGTATGATTCTAATCAACACACAACTTGAAGGTGAAGAGCTTATAGCTGACCCTCATGTTTTGCCAGCCACTGCTGTTGGAGTTTCAGCTGGCAAAGCCATCATAGACTATATAGCTTCTTCGAAACATCGAGCTAAAGCTTCGATCATGTTCGAAGGGACTAAATATGGAAGCCGAGCGCCTAGAGTGGCTGCATTTTCTTCTCGAGGGCCAAGCTTTTTTGAACCATACGTGATAAAGCCAGACGTAACTGCACCTGGTGTTAATATATTGGCTGCTTGGCCGTCCATTGTGAGCCCAAGTGAGCTCAAGTCTGATAAAAGAAGAGTATTGTTCAATATCATTTCAGGGACTTCTATGTCTTGCCCTCATGTCAGTGGTTTAGCTGCATTGCTTAAATCAGCTCACAAGGATTGGTCGCCTGCCGCAATTAAATCGGCGCTCATGACAACAGCTTACGTTACTGACAACAAAAAGCATCTCATTTCCGACGTTGGTCGTGCTAGCGGTGGTCCTGCGGACCCTTTTGCGTTTGGTTCTGGCCATGTCGATCCTGAGAAAGCTTCCGATCCAGGGCTCATATACGATATTGCGCCCCAAGACTACATAAACTACTTGTGTAGCTTGAAGTATAACTCAACACAAATTGCTTTAGTTTCAAGAGGGAAATTCAGATGTCCATCAAGAAAAACATTTCTTCAGCCAGGAGACTTGAACTACCCTTCTTTTGCTGTGTTCATGAAGAAGGACAAGAATGTTACTATTACATTCCAGAGAACAGTGACAAATGTTGGTATCCCAAGAAGTGATTACACAGTTAAAATCAACAATCCAAAAGGAATAAGAATTACTGTAAAGCCTGAGAAGTTAAGTTTTGTGAGATTGGGAGAGAAGTTGAGTTACAAAGTGAGTTTTGTTGCATTGGGGGGAAAAGAAGCTTTGGATGAGTTTTCTCCTGGATCTTTGGAAGAGTTTTCTTTTGGATCTCTTGTTTGGAAGTCAGGAAAATATGTTGTTAGAAGTCCTATAGCAGTGACTTGGCAGTAG | 2385 | 42.98 | MLQTMGLREVLLFLSITILATSSAAMDQQTYIIHMDTTKMATTNNPEKWYTAMIDSLNELSSLDDENNEEEASNPAEILYVYKTTISGKILNINHLDSFSGFAAKLSTKNLHSLSKMPGFLAATPNELLQLHTTYSPQFLGLQRGHGLWNSSNLASDIIIGLLDTGVWPEHISFRDKGLPPVPSKWKGICQVGPKFSPSNCNKKLIGARAYIKGYEAVIGRLNTTGTFRSPRDSDGHGTHTASTAAGNSVNRASFYSQGMGVATGMRFTSRIAAYKVCWPEGCASADILAAMDHAVADGVDVLSISLGGGSGIFYSDEIAIAAFGAIQNGVFVSCSAGNSGPFISTVGNVAPWIMTVAASYTDRTFPTTIKLGNGKVFEGSSLYFGKNLNALPLFYNNTAGYGQETNLCTAGSLVPSMVKGKFVVCERGTNSRTEKGEQVKLAGGAGMILINTQLEGEELIADPHVLPATAVGVSAGKAIIDYIASSKHRAKASIMFEGTKYGSRAPRVAAFSSRGPSFFEPYVIKPDVTAPGVNILAAWPSIVSPSELKSDKRRVLFNIISGTSMSCPHVSGLAALLKSAHKDWSPAAIKSALMTTAYVTDNKKHLISDVGRASGGPADPFAFGSGHVDPEKASDPGLIYDIAPQDYINYLCSLKYNSTQIALVSRGKFRCPSRKTFLQPGDLNYPSFAVFMKKDKNVTITFQRTVTNVGIPRSDYTVKINNPKGIRITVKPEKLSFVRLGEKLSYKVSFVALGGKEALDEFSPGSLEEFSFGSLVWKSGKYVVRSPIAVTWQ | 794 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 16301953 | 16304675 | - | Lsi04G011550.1 | Lsi04g01155 | 661204 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi04g01155 | 794 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.1 | 20 | 794 | - | - | |
Lsi04g01155 | 794 | Gene3D | Peptidase S8/S53 domain | 157 | 648 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi04g01155 | 794 | Pfam | Peptidase inhibitor I9 | 30 | 132 | IPR010259 | - | |
Lsi04g01155 | 794 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 134 | 635 | - | - | |
Lsi04g01155 | 794 | Pfam | PA domain | 399 | 480 | IPR003137 | - | |
Lsi04g01155 | 794 | Pfam | Fibronectin type-III domain | 683 | 791 | IPR041469 | - | |
Lsi04g01155 | 794 | CDD | Peptidases_S8_3 | 129 | 599 | IPR034197 | - | |
Lsi04g01155 | 794 | CDD | PA_subtilisin_like | 369 | 495 | - | - | |
Lsi04g01155 | 794 | PRINTS | Subtilisin serine protease family (S8) signature | 155 | 174 | IPR015500 | - | |
Lsi04g01155 | 794 | PRINTS | Subtilisin serine protease family (S8) signature | 233 | 246 | IPR015500 | - | |
Lsi04g01155 | 794 | PRINTS | Subtilisin serine protease family (S8) signature | 562 | 578 | IPR015500 | - | |
Lsi04g01155 | 794 | Gene3D | - | 363 | 502 | - | - | |
Lsi04g01155 | 794 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 16 | 89 | IPR037045 | - | |
Lsi04g01155 | 794 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 93 | 132 | IPR037045 | - | |
Lsi04g01155 | 794 | SUPERFAMILY | Subtilisin-like | 131 | 639 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi04g01155 | 794 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 563 | 573 | IPR023828 | - | |
Lsi04g01155 | 794 | Pfam | Subtilase family | 156 | 613 | IPR000209 | GO:0006508|GO:0008236 | |
Lsi04g01155 | 794 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 20 | 794 | IPR045051 | - | |
Lsi04g01155 | 794 | Gene3D | - | 652 | 793 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi04g01155 | Lsi-Chr4:16301953 | Lsi06g00340 | Lsi-Chr6:3784647 | 0 | dispersed | |
Lsi08g01526 | Lsi-Chr8:23322442 | Lsi04g01155 | Lsi-Chr4:16301953 | 5.45E-147 | dispersed | |
Lsi09g00345 | Lsi-Chr9:3588571 | Lsi04g01155 | Lsi-Chr4:16301953 | 0 | dispersed | |
Lsi04g01155 | Lsi-Chr4:16301953 | Lsi04g01156 | Lsi-Chr4:16379761 | 3.79E-07 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi04g01155 | - | - | csv:101222234 | 1279.23 |