Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi04g01324 ATGGCTGAAAATGCCTCCCCAGAGGGGAGATCTCTGGCTCTGACGCCTACTTGGTCTGTTGCTTCTGTGTTGACAATTTTTGTTGCCGTTTCATTGCTCGTAGAACGCTCCATTCATAGGCTAAGCTCTTGGCTGGGAAAAACTCATAGAAAACCCTTATTTGAGGCAGTGGAGAAAATGAAAGAAGAGTTAATGCTGCTTGGATTTATTTCTTTGCTTCTGACGGCATCATCGAGTCTGATATCAAATATCTGCATTCCATCCAAGTTTTATGATACCTCTTTTATTCCATGCTCCCAGTCGGAGATTGATGAACAAAATGCGGATAATTCTTCATCTGAGAAGCGAAAGCTATTAACGGTTTCTGTTTTCCCACATTTGTATAGGAAGATGCTAACTGGTCACGAGCCCTTTGTTTCATATGAAGGGCTTGAGCAATTGCATCGCTTTATCTTTGTAATGGCAGTAACTCATATATCTTATAGTTGCTTAACCATGTTGCTGGCAATTGTGAAGATCCACAGTTGGAGAGTATGGGAAAATGAAGCTCACATGGACCACCATGATTTATTCAATGGTGAGCTCTATGATTATGTTATGTATCTTCTCTTAGCCACTGAAAGAGTTCACAAGGAATCTGAGAGTTCAAACCCAAAACTTTGGAGGATATCTCCGACCATATGCCAAGCCCATACCACCATAATACCAGATTCCAAGAACAATGAGAAGTTATTGACATATTTTAAATATGATGCTAAAAACTACATATCAACTGCTACATGTTTCTTCCGGCAATTTGGGCGTTCTGTTGTTCGTTCTGACTACCTTACACTTCGCAAAGGCTTCATCACGAATCACAACCTCTCATCAAGATATGATTTCCATAGCTACATGGTGCGTTCTATGGAAGAAGAATTCCAGAGGATAGTTGGTGTGAGCGGTCCATTATGGGGATTTGTCGTTGCTTTTTTGCTGTTTAATGTGAAAGGCTCTAACCTATATTTTTGGATAGCAACTATTCCTGTTACTCTTGTTCTTTTAGTGGGCACAAAGTTACAGCATGTTATTGCAACTTTGACGTTGGAGAATGCTGGTATAACCGGATTCTTTTCTGGAGCAAAGCTTAGGCCCCGTGATGATCTTTTCTGGTTTAAGAAGCCTGAACTCCTGTTGTCCTTGATCCATTTTGTTCTTTTCCAGGCAAAATGCTTTCGAGTTGGCTTCGTTCTTCTGTGGCAATTTGGATATAGTTCTTGCTTCATTAGCAATCATCTGCTTGTCTATGTAAGGCTAATCTTGGGTTTTGCCGGACAATTTCTTTGCAGCTATAGCACCTTGCCCCTGTACGCACTGGTTACTCAGATGGGAACAAACTACAAGGCTGCCTTGATTCCTCAAAGAATAAGGGAAACAATCCATGGGTGGGGTAAGTCAGCTAGAAGGAAGAGAAGGCTCCGGATATTTACTGATGATGCCACAATCCACACAGAAACAAGCACGGTGATGTCACTTGAGGACGACGACAACCAGCATGTCGATACACCTAAAACTGCCACTGGCTATGCCGTAATTGAGATGCAGCCACCTACTGCAGCGAATGTGTCCGTCTCGATCACTAATGATGCATCACGTGCGGTTAGAACTCCCCTTCTTCAACCCTCTCTGTCTCTTTCCTTACCTGTGGCTCAAAACTTCAATGCTGGAGCCCCATTAAGAAGCTCATCTATGCCGGCTCAAAACTTCAATGTCGAAAACTCTTTAAGAAGCGCATCTATGCCGAGATGA 1785 42.46 MAENASPEGRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSSWLGKTHRKPLFEAVEKMKEELMLLGFISLLLTASSSLISNICIPSKFYDTSFIPCSQSEIDEQNADNSSSEKRKLLTVSVFPHLYRKMLTGHEPFVSYEGLEQLHRFIFVMAVTHISYSCLTMLLAIVKIHSWRVWENEAHMDHHDLFNGELYDYVMYLLLATERVHKESESSNPKLWRISPTICQAHTTIIPDSKNNEKLLTYFKYDAKNYISTATCFFRQFGRSVVRSDYLTLRKGFITNHNLSSRYDFHSYMVRSMEEEFQRIVGVSGPLWGFVVAFLLFNVKGSNLYFWIATIPVTLVLLVGTKLQHVIATLTLENAGITGFFSGAKLRPRDDLFWFKKPELLLSLIHFVLFQAKCFRVGFVLLWQFGYSSCFISNHLLVYVRLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKSARRKRRLRIFTDDATIHTETSTVMSLEDDDNQHVDTPKTATGYAVIEMQPPTAANVSVSITNDASRAVRTPLLQPSLSLSLPVAQNFNAGAPLRSSSMPAQNFNVENSLRSASMPR 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21042641 21050456 + Lsi04G013240.1 Lsi04g01324 661373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi04g01324 594 MobiDBLite consensus disorder prediction 570 594 - -
Lsi04g01324 594 Pfam Mlo family 253 492 IPR004326 GO:0006952|GO:0016021
Lsi04g01324 594 Pfam Mlo family 10 189 IPR004326 GO:0006952|GO:0016021
Lsi04g01324 594 PANTHER MLO-LIKE PROTEIN 1 5 529 IPR004326 GO:0006952|GO:0016021
Lsi04g01324 594 PANTHER MLO-LIKE PROTEIN 11 5 529 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g01324 Lsi-Chr4:21042641 Lsi09g01887 Lsi-Chr9:27665414 1.15E-81 dispersed
Lsi02g01541 Lsi-Chr2:21259002 Lsi04g01324 Lsi-Chr4:21042641 1.39E-87 transposed
Lsi05g00163 Lsi-Chr5:2369569 Lsi04g01324 Lsi-Chr4:21042641 1.53E-20 transposed
Lsi07g01097 Lsi-Chr7:16356654 Lsi04g01324 Lsi-Chr4:21042641 4.38E-102 transposed
Lsi04g01324 Lsi-Chr4:21042641 Lsi08g00776 Lsi-Chr8:16142106 5.73E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi04g01324 K08472 - csv:101207170 965.296