Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi04g01591 ATGGCGATTCCCGGTTCTTGGACTTTTCTGGCAAACGGATGTTTTGTGATCAAGAAGCCAGTGTTCCTAATCGCACCGATTGGCGATACCGACTGTATCACCGGTCTAAGAAGAACAATGGCTTCCTCTGTCTCATCTTCAGTTAGCAAGGAAGTCCCCGAAGTAGCTAATCAACTGGAGAAAATCACTGCACCCTATGGCTCATGGAAGTCTCCGATCACTGCTGACCTTGTGTCCGGCGCTTCCAAGCGAATCGGCGGTGCTGCCGTTGATGGTTCTGGTCGCCTTATCTGGCTTGAATCACGGCCCTCTGAATCTGGGCGGGAAGTTCTTGTCAAGGAACCGGAAAAGCTGGGCGATGAGATTATTGATATTACTCCAAAGGAGTTTTCAGTTCGGACCACTGTACATGAGTACGGTGGTGGTGCTTTCATGGTATCTGGGGACACTATAGTCTTCTCTAATTTCGAGGATCAGAGACTATATAAGCAATCAATTAAACCCCATGATTCTTCTCCTCGGCCCATTACTCCAAATTATGGTGGACCATTAGTCAGTTATGCTGATGGAGTGTTTGATTTACGTTTCAATCGTTATATCGCTGTACGGGAAGATCGGCGCAATAATAGCTCAAGTCCAACCGCAACCATTGTGTCTATAGGACTCGAAGGGAAGGCTATAGAAGATCCAGAGGTACTTGTTGAGGGAAGTGACTTTTATGCTTTTCCTCGAGTGGATCCCGAAGGGAAACGGATTGCATGGATCCAATGGCATCACCCTAACATGTCATGGGATAAATCAGAGCTTTGGGTTGGTTACTTTTCTGAGAATGGTGAAATCGACAAGTGTGTCTGTGTTGCTGGTTGTGATCCAGAGCTAGTGGAGTCACCTACCGAGCCTAAGTGGTCCTCTGAGGGAGAACTTTTTTTTGTTACTGATAGGAAAAATGGGTTCTGGAATCTATACAAATGGTTTGAGGCAGATAATAAGGTGTCTCCAGTTTACTCTTTGAATGCGGAATTTTCGCGACCATTTTGGGTTTTTGGCATAAACTCTTATGGTTTTTTACCTGGCAATCAAGGAGAAAACTATATACTTTGCAGCTATAGGCAACATGGGAGGTCATATCTTGGAGTTCTGGGTGATGGACAAAGCTCTCCATCTCTTCTTGATATTCCCTTATCAGATATTGATAATATTACTATTGGGAACCATTGCTTTTATGTGGAGGGAGCTTCAGCCTTTCATCCACCATCAATTGCTAAGGTTACTCTAGACGATAAAAGCTGGAAAGTAGTTGAGTTCACTATTATCTGGTCGTCATCGATTGATATTTTGACATATAAGTCATACTTCAGTACTCCAGAGTTTATTGAATTTGCAACAGAAGTGCCTGGTGAAAAGGCTTATGCCTATTTTTATCCACCATTCAATCCCATTTACCATTCTAGTGAGGACGAAAAGCCTCCATTGTTGTTGGAAAGCCATGTTATTACAGGAGGACCGACGGATGAATCACGTGGAATATTAAATCTAAGAGTTCAGTATTGGACTAGTCGAGGATGGGCGTTTGTCAATGTTAACTATGGAGGAAGCTCTGGTATACTCGTTGAAGTAAGCGATTGTGCTCTAGTTCACTCTGAATTATATTGGTGCAAGTGGTGGATGGAAGTCGATTCAGGAGTAGTTGATGCAGAACGATTATGCATTTCTGGGGAATCTGCTGGGGGATACACTACCTTAGCTGCTCTTGCTTTCAGAGATGCATTCAAGGCAGGAGCTTCTTTCCGTTTATTAGTTTCATTCCTTTTTGAATCCCATCTTCTAGTTCAACACCCTAAGGCAATTATTGATGTTGTGCCTCCTATTCAAGCTCGTAAGATCTATGAAGCACTGAAAGAGAAGGGCCTCCCTGTTGCTTTAATTGAATACGAAGGAGAACAACACGGCTTTCGTAAGGCCGAGAATATAAAATTTACGTTGGAACAACAAATGCTGTTCTTTGCAAGATTGGTCGGACACTTTGAAGTTGCTGATTAG 2040 43.33 MAIPGSWTFLANGCFVIKKPVFLIAPIGDTDCITGLRRTMASSVSSSVSKEVPEVANQLEKITAPYGSWKSPITADLVSGASKRIGGAAVDGSGRLIWLESRPSESGREVLVKEPEKLGDEIIDITPKEFSVRTTVHEYGGGAFMVSGDTIVFSNFEDQRLYKQSIKPHDSSPRPITPNYGGPLVSYADGVFDLRFNRYIAVREDRRNNSSSPTATIVSIGLEGKAIEDPEVLVEGSDFYAFPRVDPEGKRIAWIQWHHPNMSWDKSELWVGYFSENGEIDKCVCVAGCDPELVESPTEPKWSSEGELFFVTDRKNGFWNLYKWFEADNKVSPVYSLNAEFSRPFWVFGINSYGFLPGNQGENYILCSYRQHGRSYLGVLGDGQSSPSLLDIPLSDIDNITIGNHCFYVEGASAFHPPSIAKVTLDDKSWKVVEFTIIWSSSIDILTYKSYFSTPEFIEFATEVPGEKAYAYFYPPFNPIYHSSEDEKPPLLLESHVITGGPTDESRGILNLRVQYWTSRGWAFVNVNYGGSSGILVEVSDCALVHSELYWCKWWMEVDSGVVDAERLCISGESAGGYTTLAALAFRDAFKAGASFRLLVSFLFESHLLVQHPKAIIDVVPPIQARKIYEALKEKGLPVALIEYEGEQHGFRKAENIKFTLEQQMLFFARLVGHFEVAD 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23421597 23428072 - Lsi04G015910.1 Lsi04g01591 661640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi04g01591 679 Gene3D alpha/beta hydrolase 447 676 IPR029058 -
Lsi04g01591 679 SUPERFAMILY alpha/beta-Hydrolases 464 672 IPR029058 -
Lsi04g01591 679 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 618 679 - -
Lsi04g01591 679 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 60 596 - -
Lsi04g01591 679 Pfam Prolyl oligopeptidase family 513 595 IPR001375 GO:0006508|GO:0008236
Lsi04g01591 679 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 618 679 - -
Lsi04g01591 679 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 60 596 - -
Lsi04g01591 679 SUPERFAMILY Tricorn protease N-terminal domain 135 344 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g01587 Lsi-Chr4:23408449 Lsi04g01591 Lsi-Chr4:23421597 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi04g01591 - - csv:101221995 1073.54