Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi04g01647 | ATGTATATTATTGTGCCTTTCGTTCTTCTTTTTGTCTCAATCCTCTTCAAATTTCTCTACGCCAATTTATGGGTTCCATGGAGAATTCAAATCCACTTCCAAAAACAGGGGATAACAGGGCCTTCCTACCGTCCGATTATCGGTAACGCCACCGATATCCGCCGTCTGTACAAGGAGGCCAATGCGAAGCCAATTCCGTTAACCCACGATATAGTGTGTCGGGTGCTGCCTTATATTCACCGGTGGTCCGAGGAGTACGGAAAGATGTTTGTGTATTGGTTCGGGTCGAAACCGAGATTGGCGATATCCGACCCGGAAATGATTAAGGAAGTGCTTACGAATACGGGTGGGCCTTTTAGAAAGGTCGGGTTCACTCCGGTTTCCAAGTTGCTGTTTGGAGAAGGACTTGTCGGACTCGAGGGTGAACAATGGGTCCTCCATCGGAAAATCGCTAATCAGGCTTTCACCATCGACCGTGTGAAGGGTTGGTTACCAGAGATTACATTGAGTGTTCGTAATGTTTTGGAGAAATGGGAAGAGATGAAGGGAGGACAGGAAGAGTTTGAATTAGATGTCCATAAACAACTTCGCCTCCTCACAGCTGACGTAATTTCAAGAACTGCTTTTGGAAGTAATTTTGAAGAAGGCAAACGTATTTTCAATTTGCAAGAACAACAAATGCATCATTTTCTCCAGGCCGTCTCAAGTGTTTATATTCCAGGCTATAGATTTTTACCTACCAAGGGGAACAGAGAGAGGCAGAGACTGGAAAAAGAAACTCGTGCTTCAATAAAAGCACTAGTTGAAAGCATGGAAACAACTGCTAATCTTTTAACTTGGGCCCTTTTACTACTAGCAGAGCATCAAGAATGGCAAGACCGAGCTCGAAAAGAAGTCATCAAAGTCTGCGGCCACAAGACACCGCCTGTGGCCGATAATTTAACCGAACTTAAACTAGTGGGTATGATAGTCAACGAAACACTTCGACTTTATCCTCCAGCAGTGATGATGATGCGGCGGACAACAAAACGGTTGACGTTAGGAAACGTCGATGTGCCGGAAGGCACACAACTTCAACTCTCAGTGGCTGCAGTTCACCATGACACAGATCTTTGGGGAGAAGATGCGAGCAGTTTCAACCCTATGAGATTTAGTGAGCCTAGAAAGCATTTGGCTTCATTTTTGCCATTTGGGTTGGGTCCAAGAATCTGTGTAGGCCAACATTTGGCTTTGATTGAGGCCAAAGTTGCATTGGCTATGATAATTCAACGATTCTCTTTTACGGTTTCTCCAACCTACACGCATGCCCCCATGATGTTTGTAAGCTTAAATCCTCAATTCGGTGTTCAGCTCCTCGTTAGGAGCTTATGGAATTGA | 1377 | 44.88 | MYIIVPFVLLFVSILFKFLYANLWVPWRIQIHFQKQGITGPSYRPIIGNATDIRRLYKEANAKPIPLTHDIVCRVLPYIHRWSEEYGKMFVYWFGSKPRLAISDPEMIKEVLTNTGGPFRKVGFTPVSKLLFGEGLVGLEGEQWVLHRKIANQAFTIDRVKGWLPEITLSVRNVLEKWEEMKGGQEEFELDVHKQLRLLTADVISRTAFGSNFEEGKRIFNLQEQQMHHFLQAVSSVYIPGYRFLPTKGNRERQRLEKETRASIKALVESMETTANLLTWALLLLAEHQEWQDRARKEVIKVCGHKTPPVADNLTELKLVGMIVNETLRLYPPAVMMMRRTTKRLTLGNVDVPEGTQLQLSVAAVHHDTDLWGEDASSFNPMRFSEPRKHLASFLPFGLGPRICVGQHLALIEAKVALAMIIQRFSFTVSPTYTHAPMMFVSLNPQFGVQLLVRSLWN | 458 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 23946285 | 23948961 | - | Lsi04G016470.1 | Lsi04g01647 | 661696 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi04g01647 | 458 | PRINTS | P450 superfamily signature | 395 | 404 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | PRINTS | P450 superfamily signature | 322 | 333 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | PRINTS | P450 superfamily signature | 404 | 415 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | PRINTS | P450 superfamily signature | 269 | 286 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | SUPERFAMILY | Cytochrome P450 | 36 | 454 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 8 | 270 | - | - | |
Lsi04g01647 | 458 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 271 | 451 | - | - | |
Lsi04g01647 | 458 | Pfam | Cytochrome P450 | 264 | 436 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | Pfam | Cytochrome P450 | 79 | 269 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 397 | 406 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi04g01647 | 458 | PRINTS | E-class P450 group I signature | 107 | 128 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | PRINTS | E-class P450 group I signature | 394 | 404 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | PRINTS | E-class P450 group I signature | 404 | 427 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | PRINTS | E-class P450 group I signature | 83 | 102 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | PRINTS | E-class P450 group I signature | 199 | 217 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | Gene3D | Cytochrome P450 | 268 | 450 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | Gene3D | Cytochrome P450 | 28 | 267 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi04g01647 | 458 | PANTHER | CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 | 8 | 270 | - | - | |
Lsi04g01647 | 458 | PANTHER | CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 | 271 | 451 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi04g01645 | Lsi-Chr4:23913684 | Lsi04g01647 | Lsi-Chr4:23946285 | 0 | dispersed | |
Lsi04g01647 | Lsi-Chr4:23946285 | Lsi06g00938 | Lsi-Chr6:19296181 | 1.93E-128 | dispersed | |
Lsi04g01646 | Lsi-Chr4:23929052 | Lsi04g01647 | Lsi-Chr4:23946285 | 5.40E-159 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi04g01647 | - | - | csv:101210785 | 808.52 |