Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi04g01804 | ATGGCTGGATCGGATGAGAACAACCCCGGAGTGATCGGACGGGCAAATCTCCACGGGAGTTTACGAATTGGTGGTGGTGGCGGTGGCAAATTTGTGGTGGGGATGGGTCAAAACCGCAGAGCTTTGAGCAGCATTAATGGAAATGTTGCAGCAGCTCCTCCTGCCCCTCATCCCTGTGCAGTCCTCAAAAGAGGCTTAACAGAAACTGATGTTGTCCTCAACAATAAAGACCAGCCGATTCCAATTCATCGACCTATCACTCGGAAGTTTGCAGCTCAGCTGGCCAATAAGCAGCAGCCACCTGTGTCTAAGGTTGATAAAAAGCCACTTGAATCTGCTCCAACTCACAAAGAATCGTCAGATCATCATCCCATCATAGAGGAAGATGATTCCATGGGTGAATCAACAGTTCCAATGTTTGTTCAACACACAGAAGCAATGTTGGACGAAATTGACAGAATGGAGGAGGTGGAAATGGAAGATATAGAAGAAGAGCCAGTAATTGATATAGACAGCCGTGATAAGAAGGATCAACTAGCTGTTGTGGAGTACATTGATGACTTGTATGCTTTCTACAGGAAATCCGAGGTACACTACAAGTTTGAGCTGATGGAAGAGACATTGTACTTAACAGTCAACCTGATTGATAGATTCTTAGCTGTTCACTCAGTAGTGAGAAAGAAGCTTCAGCTTGTTGGAGTGACGGCCATGCTTATTGCTTGCAAGTATGAAGAGGTTTCTGTTCCAGTTGTTGACGATCTTATTCTAATATCTGACAAAGCCTACACCCGAAAAGAAGTTCTAGACATGGAGAAGTTGATGATCAATACCTTACAGTTCAATCTGTCTGTTCCAACACCTTATGTCTTCATGAGAAGGTTTCTCAAAGCTGCACAATCTGATAGAGAGCTGGATTTGCTCTCCTTCTTCATGGTGGAACTCTGTCTAGTGGAGTATGAAATGCTGAAGTATAGACCTTCATTAATGGCTGCTGCTGCAGTGTTCACTGCTCAATGCACCGTGAATGGCTTCAAAGAATGGAGCAAAACCAGTGAATGGCACACTGGCTATTCACAAGAACAACTTCTGGAATGTTCAAGGCTGATGGTGGAGTTCCATAAGAAAGCAGGGACAGGGAAATTAACAGGAGTTCATAGGAAGTATTGCACATCCAAGTTTGGATATGCTGCTAGAAGTGAGCCAGCAAGCTTTCTGTTGGAAGAAAGGCAATGA | 1233 | 44.28 | MAGSDENNPGVIGRANLHGSLRIGGGGGGKFVVGMGQNRRALSSINGNVAAAPPAPHPCAVLKRGLTETDVVLNNKDQPIPIHRPITRKFAAQLANKQQPPVSKVDKKPLESAPTHKESSDHHPIIEEDDSMGESTVPMFVQHTEAMLDEIDRMEEVEMEDIEEEPVIDIDSRDKKDQLAVVEYIDDLYAFYRKSEVHYKFELMEETLYLTVNLIDRFLAVHSVVRKKLQLVGVTAMLIACKYEEVSVPVVDDLILISDKAYTRKEVLDMEKLMINTLQFNLSVPTPYVFMRRFLKAAQSDRELDLLSFFMVELCLVEYEMLKYRPSLMAAAAVFTAQCTVNGFKEWSKTSEWHTGYSQEQLLECSRLMVEFHKKAGTGKLTGVHRKYCTSKFGYAARSEPASFLLEERQ | 410 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 25250289 | 25253464 | - | Lsi04G018040.1 | Lsi04g01804 | 661853 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi04g01804 | 410 | Gene3D | - | 181 | 277 | - | - | |
Lsi04g01804 | 410 | SMART | cyclin_7 | 289 | 371 | IPR013763 | - | |
Lsi04g01804 | 410 | SMART | cyclin_7 | 192 | 276 | IPR013763 | - | |
Lsi04g01804 | 410 | MobiDBLite | consensus disorder prediction | 93 | 129 | - | - | |
Lsi04g01804 | 410 | PANTHER | CYCLIN-B2-3-RELATED | 27 | 196 | - | - | |
Lsi04g01804 | 410 | PANTHER | CYCLINS | 196 | 403 | IPR039361 | - | |
Lsi04g01804 | 410 | SUPERFAMILY | Cyclin-like | 177 | 282 | IPR036915 | - | |
Lsi04g01804 | 410 | SMART | Cyclin_C_2 | 285 | 402 | IPR004367 | - | |
Lsi04g01804 | 410 | Pfam | Cyclin, N-terminal domain | 196 | 283 | IPR006671 | - | |
Lsi04g01804 | 410 | PANTHER | CYCLIN-B2-3-RELATED | 196 | 403 | - | - | |
Lsi04g01804 | 410 | MobiDBLite | consensus disorder prediction | 109 | 129 | - | - | |
Lsi04g01804 | 410 | CDD | CYCLIN | 283 | 370 | IPR013763 | - | |
Lsi04g01804 | 410 | Gene3D | - | 278 | 407 | - | - | |
Lsi04g01804 | 410 | SUPERFAMILY | Cyclin-like | 284 | 402 | IPR036915 | - | |
Lsi04g01804 | 410 | Pfam | Cyclin, C-terminal domain | 285 | 399 | IPR004367 | - | |
Lsi04g01804 | 410 | PANTHER | CYCLINS | 27 | 196 | IPR039361 | - | |
Lsi04g01804 | 410 | CDD | CYCLIN | 196 | 274 | IPR013763 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi04g01804 | Lsi-Chr4:25250289 | Lsi10g01118 | Lsi-Chr10:15432307 | 1.07E-62 | dispersed | |
Lsi11g01591 | Lsi-Chr11:24296969 | Lsi04g01804 | Lsi-Chr4:25250289 | 1.82E-64 | transposed | |
Lsi01g00535 | Lsi-Chr1:4369805 | Lsi04g01804 | Lsi-Chr4:25250289 | 2.24E-145 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi04g01804 | K21777 | - | csv:101223199 | 711.835 |