Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi04g02285 ATGAACATCGTTAAGGGTGTAGCTGACCTGATTCGTAGGACATCTAGTGGCCCTCTTGCCGTTTCAGGGTCACAAGCTAACTTGTCACATCCTCCGGGTCCAAAAATACGATTCGGTGAAGTTGGCGATGAGGCAATTCTTAATGAACTTTGGGTTAGATGTGAGAAAGCTGCTGATAAAGGGGAGAGAAAAAGGATGTTTTATGTTTTCTTGAAGCAATTTATAGTAGCATACAAGAACTGGAAACCAATAAATTCTGGCTGGCTCTCGGAGGATGCCTTAACTTCTGTGGAGAACTTGTCAACTTCAGATCATACTGTTGTTGGCTGCTCTAGTGGACATCCTGCGGAAATCATTTTAAAATTAACTGAAGAGGTCAAGCAATTGTCTTCTCTTATTGTTGAATGGCGGTCAACAGCAGACTTACTTGGAGCATCAATTGGCTTAAATTTAACTTCAGAAGTCTTGGATGCCTTGGCAATAGTCATGCGTTCAATGCACAACTGTAAAGTTTTTGGGTATTATAGTGGGATTCAGAAGCTCACAGCATTGATGAAAGGTGGTCTCATCAGGGCTGTTATCCAACTTAAGACAATAGCAGGCGAACATTCTGTTGATGAAGGTCTATCTAATATTGTTGTGGAAAATACCAGACTCCTACAACAGATGTTAAAATATGTTGTATCAATAGTACACATTTTCATTGACATTGATTCGCTTCTTTGTGTGGAGGATCATTCTCTAAGTATGAAGGTACCAACTTGTGAAGAGAGATTAATGTGGCGTCAGAAGGCAGTTGTGTCAGTGATGGAAGCGGGTGGAATTAATTGGTTAGTAGAATTGTTGCGCGTTACTAGAAGGTTGAATATCAAAGAACAAAATATTGAAGTTGAGCTCCAATTTTTGGCTTTAAAAATTCTCTATTCTGCATTATCTGAGAACCCGCGGGGTCAAAATCATTTTAAAAGCATTGGTGGACTTGAAGTCTTGTTAGATGGTCTTGGACTTCCATCCAAAATTGTTTTAGCTCCGAAGGACCCAGCTGGTGCTGACCAGAGAAGGTTTACACCTTTCACTGTAATTTATCTAGATTTTTCACCTGTCTGTGAGGAGAGTTTTGAAGCTATAAATAAAATTTTCTTTGCTTTCATGCTTCAAGAATACAAACTGCAGATTGGGGAGTTATCCGGACAGCATGATTTTAGATGGCCTGTCCTTGACTGTAAATACAATGTTGCAGCTCAGTCGGGAGAGTGTTCTGTTGTACCTTTAGCCAATCTCACTCATATACAATCTTGGAATGAATATGTTGTGAAGTTATGCAAAGTACTTTGTTCTTTTCTTCTTGCTCCCGAAGATGTTAAACCTCATCATCCTCAAGCATCTTCTATTCGAATCATGACACCGGTTTCATTGGTCTATGGCGATCTTTCAATCAAATGGGTCATGAGGGTACTTGTAGCCGTGTTCCCCTGCATTAGGGCTTGCTCTAATCAAAATGATTTGCCTGCCCACTTGAGGATCGTTGCCAATGCTTTGCAACACTCCGTCCTTACTGCATTTAGAAAGTTCCTTGTTTCTTCTCCAGTGTCTCTTGAAATTTTTCGAGAAGAGGGGATATGGGATCTTTTCTTCTCCGAGAATTTTTTCTATTTTGGACATGCTTTCGAGGAGTTTTTCCTAGAATGTTGCACAAACAATGATGATGACTTCTTGGAGAAACCTGAAACATATTATGCTACTAGCTCAAACAGTCCACTAAAGGTTGACGGGGTTGATATAATTCAAATTGAAGTAATTTCATTTGTAGAGTTTGCTGCAACTTCTTGTGGAAGTGCACATAATTTACCTGAATTATCTGCTTTGTTAGACACCCTTGAACAGTCTGCTTGTAATCCGGAGGTTGCTATTGCTCTCTCTAAGAGCCTGCTCCGCATATTACAAATTTCATCTGAGAGAACTGTTGCTTCATTCAAGACACTGAATGCTGTTCCCCGGTTGCTTAAAGTTGCTTGTGTTCAAGCCCAGGAACATAGAAGATCTGGAAATGTTATTTCATCTGAGATTAATCATGTCGAAGACATTCAATCTCGAAGTAATCAGGGACATGATTCACGGGAGACAGCTCAAAGTTGTCTTTCATGCTTGGAAACCATCATGGAGGTTTTCACAGAATTTTTCTCAATAGGCGATGAAGCTAAAAGTTTGGTTCTGCTTAATTCAACATCAATTGATTGTCTGTTTGATTTATTTTGGGAAGAAAGTTTGAGAGGCCGTGTACTTAAACACACACTTGAGCTCATAAAGATAAAACCAATTTCTGAGGAAGATCAAAAGGCAAAATTGTATATTTGTACTAAATATCTTGAAATGTTTGCTCAAATTAAAGAGCGGGAGAAAAGTTCTACGGAGCTCTCTATTGATCTGTTGGTTGGAATCAGAGAGATGCTTCTGAATGATCCTCAGTACTACCAAACTCTGTTTCGTGATGGAGAGTGCTTTTTGCATATTGTCTCTTTATTGAATGGTAATGTCGATGAGGCAAATGGTGAAAAGTTGATTTTGAATGTCCTTCAAACTCTGACTTGTCTGCTAGCTAAAAATGAAGTCTCAAAGGCTTCATTTAGAGCTTTGGCTGGGAAGGGTTACCAGACAATGCAAACTTTGCTTTTGGACTTCTGTCAGTGCCATCCAAGTGATGTACTCTTAACTGCCTTGCTCGATATGCTTGTTGATGGAAATTTTGACTCGAAGTTGTGCCCTATTATACAGAATGAAGACGTGATCATTCTTTATCTGAGTGTTCTGCAGAAGAGCAGCGAGCCACTGCAGCATCAAGGGTTTAATATATTTCAACAGCTTCTTCGGGATTCTATATCCAATCGAGCATCTTGTGTGAGAGCAGGAATGCTGACTTTTCTTCTGGATTGGTTTGGTCAAGATAACAACGAGGATGTCATTGTGAAAATTGCTCAGTTAATTCAAGTAATAGGTGGGCATAGTGTATCCGGGAAGGATATCCGCAAAATTTTTGCTTTGTTAAGGAGTGAGAAGGTTGGGAAACAGAAACGTTATTGCTCATTGTTGATGTCCAGTATTTTATCAATGCTAACTGAGAAGGGTCCAACTGCTTTTTTTGATCTGAGTGGGAACAATTCTGGGATCTTAATTAAAACACCTATTCAGTGGCCTCTCAATAAAGGATTTTCCTTTTCATGTTGGCTTCGGGTAGAGAACTTTCCAATACATGGAACAATGGGTCTCTTCAGCTTCCTTACAGAAAATGGAAGAGGCTGCTTGGCTGTGCTTGCAAAGAACAAGCTTATTTATGAGTCTATCAATCTGAGGAGACAGAGTGTCAGGTTACATGTTAATATAGTCAGAAAGAAGTGGCATTTTCTATGTATAACCCATAGTATTGGAAGAGCATTCTCTGGGGGTAGCTTGTTGAGGTGTTATGTGGATGGTGATCTTGTTTCATCTGAGAGATGCAGATATGCTAAAGTTAATGAACCAGTAACAAATTGCACGGTTGGAGCAAAGTTCAATGTGTCTCTGAGTGAAGAAGTTGATACTAAGGAATCTGTTGAAGCTGCATTTCCTTTTCTTGGTCAGATAGGTCCTGTTTATTTGTTTAGTGATGCTATTTCTTCTGAGCAAGTGCAGGGTATTCATTCTCTTGGACCAAGCTATATGTATTCATTTCTTGACAATGACATTGCTACTTTCTCTGAAAATCCATTGCCTAGAGGAATTCTTAATGCTAAAGAGAGTTTGGCATCAAAAATTATCTTCGGCCTTAATGCGCAGGCAAGCAGTGGAAAATCATTATTTAATGTTTCACCAACATTAGATCTCATTTTGGAAAAGAATTCTTTTGAAGCTACTGCTATGGGTGGCACAGAGTTATGTTCAAGACGCTTACTACAGCGGATTATCTACTGTGTTGGGGGTGTCACTGTGCTTTTTCCTCTAATTTCTCAGTCTGACAGATATGAAAGTGAAAGTAATGGTCAGTTTGGTCAGAATGTGGATATTAGTGGTACAAAAGAGTGTCTAACAGCTGAAGTTATTGAACTTATTGCTTCTGTCCTTGATGAGAATTTACCAAATCAACATCAGATGCATCTCCTTTCTGGATTCTCCATTCTGGGATTTTTGCTGCAATCGGTCAATCCACAACAACTTAATATGGAAACTCTTGCAGCTTTAAAACATCTTTTCAATGTCATTGCAAACTGTGGATTTTGTGAGATTCTCATTCAAGATGCTATATCTAGCATATTTCTTAATCTCTCAATCTGGATCTACTCTGCTTATGAGGTGCAGCGTGAATTATACTTGTTTCTCATTCAGCAGTTTGATAATGATCCCAGACTGCTCAAGAATCTTTGCCGCCTTCCACTTATTCTTGATATGATTTGTAAGTTTTACTGTGACAAAGCTAAATGTAAATTTGCTTCTGGAAGCAAGACTGCTCTGCATCCACCTGTTGGAGTTCTTGTAGAAAGACCTACTAAGGATGAAATTCGGAAAATTCGTCTTCTTTTACTAAGCCTTGGGGAAATGAGCATTCGGCAAAATATTGTAGCAGCTGATATAAAAGCTCTTATTGCTTTTTTTGAAAGAAACCAGGATGTGACATGCATCGAGGATGTTTTACATATGGTTATTCGGGCTATAGCTCGAAAGACAGTTCTTGCTTCTTTCCACGAGCAAGTTGGTTTCATCGGTGGCTGTCCAATTTTTGTCAATCTTCTACAAAGGGAATTTGAACCTATCAGATTGCTTAGCTTGCAGTTCCTTGGTAGACTTTTGGTTGGGCTTCCTTCCGAGAAGAAAGGACTAAGATTTTTCAATCTCCCAAGTGGAAAAGCTAAATCTGTTCAAGATAGCCATAAGAAAACTAGTTTAAAGATGCAACCGCTATTCTCAGCTATATCTGATAGGTTGTTTAGGTTTCCACCAACAGACAATTTATGTGCTGCATTGTTTGATGTTCTTCTTGGGGGTGCAAGTCCCAAACAGGTATTGCAGAAACAAAATCAGTCTGATGGACAAAAAAACAAATCTCCTGGATCTCACTTTGCTGTTCCACAGAGTTTAGTGCTTATTTTCCAGTTCCTATGTAGCTGTGAGGATATTTCTGCAAGACTAAAAATAATCACAGATCTTCTTGATCTTCTTGATACAAATCCTTCGAATATTGAAGCTTTTATGGAATATGGATGGAATGCTTGGTTGACAGCCTCTGTCAAGCTTGATGCTTTGCAGCAATACAAAGTTGGGTCATTAGATCAAGTTGACGATAAAATAAATGAGCAGCGTGTTATAAGGAAACTATTTTCTGTTGTTCTTTTGCATTACATATGGTCAGTGAAGGGTGGCTGGCAACAATTAGAAGAAACAACGACTTTCCTTCTTATGCAGTCTGAGAAAGGCCAGGTCTCCTTTAAGTACTTTCTTCGTGATATGTATGAGGATCTGCTTCAGATGTTAGTGGATTTATCTTCTGGGGAGAATATCTTTGTTGCACAACCATGTCGAGATAATACATTATACCTTCTAAGGCTTATTGATGACATGCTTATAGCTGAACTTGACCATCAGTTGCCGATTCTAGCGACTGTCTTTGATGTTTCTCTTGACTCCACGGAACTGGAGCTTTACATCTCTGCCTTACATGATGTTTTGCAAGGAGAATCGGATGACTGGACAGCAAGATATTCACAGCATCAAATGGAAGTCAAAGATGACAAGATGGATGAAGAGTGGTGGCATTTTTATGATAAATTGTGGATTATTATTAGTGAGATAAATGGCAAGGGACCGAACAAAACTTTGCCGAAATCATCAACATCTGGAGGTCCTACATTTGGTCAAAGAGCCCGTGGATTAGTAGAGTCACTCAACCTTCCTGCTGCAGAGATGGCTGCAGTTGTTGTATCAGGTGGCATAGGCAGTGCATTGGGAGGAAAACCGAACAGAATTGTTGATAAGGCAATGCTTTTGCGCTCGGAGAAGTTCCCGAGAATTATTCTTCGACTTGTGATGCTTTACATTTGCAAGTCTCCACTTGAAAAAGCATCACGATGTGCACAGCAGTTTATTTCACTTTTACCTTCTCTTGTGGTTACTGATGATGAGCAAAACAAAAATAGGTTGCAGCTGTTCATCTGGTCTTTGCTTGCTGTTAGGTCACAGTACAGAATGTTAAATAATGATGCTCGCATTCATGTCATATCACATTTGATTCGAGGAACTGTAAGCTGTTGCAAATCAATACTTGCAAACAGCATAATCAGCACAGATGATTCGTCAGATACCGGTGTTTTTCTTAAAGAAACTGGATACATCCACAACCTGATTCAAAAAGAACGAGTTACTGCAGCTATAGCTGATGAAGCAAGCTTTATGAAGACATCAAAAATTGACCATGAAAAGCAGTTGCATGAGCTAAGAATCAGAATGGAGGAAAACTTTTTTAATGAGTCTAACAACCAGAAGGTTTTTGAAGATGAGATGCAAAGTAGTCTGGCTTCCATTTTGATTGCCGATGACAACAGAAGGGCTGGATTCCAGCTTGCATATGAGGAAGAGCAGCAAAATATTGCGGAAAAGTGGATGCATATGTTTCGTGCTTTGATTGATGAGCGTGGTCCGTGGTCTGCTAATTCTTCTCCAAATATTTCTTCAACACATTGGAAACTTGACAAGACTGAAGATATGTGGCGACGAAGACCCAAACTAAGAAAGAATTATCACTTCGATGAAAAGCTGTGTCACCCCCCATCAATTTCTCCTGGTGCTGACATTACTAATGCTGAAAATGAAAACAAATCTAGTATTGTTGGACACATTCCAGAGCAAATGAAAAGATTTTTGCTGAAAGGTGTTCGGAAGATAACTGATGAAGGAAACTCGGAGCTAATTGAAGATGATGCTGAACAATGTGAACCTAATGCTTCCAGTCTCAAGGACTCTTCAGATGGTCAGTACCCAGAGCTAATCAAAGACGTTGGTGACTGGAAAGATATTGTACAGGACAGAAAAGATACTTCTTTATTTTCTCCAGTGACAGAAGAAAGCGAGGTTCTCATGTCGACTCCATGCATACTTGTGACACCCAAAAGAAAATTAGCTGGACGTTTGGCTGTAATGAAAAATGTTTTGCATTTCTTTGGGGAATTTTTGGTCGAAGGTACTGGGGGAGCATCCACCTTTAAGAACTTCGAGGTTCTTAAAAGTTCAAATTTGACTAAGCTCAATCAAAGGCAGAAGTCTCTAAAGTGGTCTTTAAATTTACAATTGGATTCCAGAAAGAGTACTTCAGTTGATAACATGGAGGTGATGAATGATGATGGCTATTTAAAAAGGCCACTAAAAAATGTCAAACGCCATAGGAGATGGGACGTTGGAAAGATAAAAGGGGTTCACTGGACTCGATATTTGCTAAGATACACTGCGATAGAGATCTTCTTCAGTGATTCAGTTGCACCAGTCTTTTTTAATTTTGACTCTCCAAAAGATGCAAAAGATATTGGGACTCTGATCGTGTCTAGTAGAAATGACTATTTATTTCCTAAAGGAAGTAGTCGAAATCAAAGTGGAGTTATTTCTTTTGTTGATAGACGTGTTGCCCTAGAGATGGCAGAAACTGCCAGAGAGAGTTGGAGGAGGAGGGATATTACAAACTTTGAGTATTTAATGATTCTCAATACTCTTTCTGGAAGATCTTATAATGATTTAACTCAGTATCCAGTCTTTCCCTGGGTTTTGGCGGATTACTCCTCCGAGGTTCTTGATTTTAACAAGTCATCAACTTTTCGTGATCTTTCAAAGCCAGTTGGAGCATTAGATCTGAAACGCTTTGAGGTATTTGAAGATAGATATCGTAACTTTTGTGATCCTGACATACCAAGTTTTTATTATGGATCTCATTACGCAAGCATGGGAATTGTTTTGTACTACCTTCTACGACTGGAGCCATTTACTTCTCTTCACCGGAATTTGCAAGGTGGTAAATTTGATCATGCAGATCGCCTTTTTCAAAGCATTGATGGGACATATCGAAATTGCCTGTCCAATACAAGTGATGTGAAGGAGTTAATACCGGAGTTCTTTTACATGCCAGAGTTTCTCTGCAATTCAAATCATTATCACTTGGGGGTTAAGCAAGATGGTGAACCCATAGGTGATGTAGTCCTCCCACCTTGGGCCAAGGGCTCACCTGAAGTATTTATAAGTAGAAACCGGGAAGCGCTTGAAAGTGAGTATGTTAGTTCGAACCTACATCACTGGATAGATCTGGTTTTTGGTTATAAGCAGCGTGGAAAACCAGCAGTGGAGGCTGCGAATGTATTTTATTATTTGACTTATGAAGGTGCTGTTGATCTTGACACTATGGAAGATGATCTGCAAAGATCAGCAATTGAAGATCAAATTGCTAATTTTGGCCAAACACCAATCCAGATTTTTCGTAAAAAACATCCAAGAAGAGGGCCACCAATACCAATAGCACACCCGTTATATTTTGCTCCTGGTTCCATTAATTTAACGTCCATTATTTCATGTTTCACTAATCCTCCGTTAGCCATATTACACATTAGTATGTTAGACACACATATTGTCCTTGTGAGCCAGGGGCTAATTCTGACTGTTAAGATGTGGCTGACCACCCAGTTACAGTATGGAGGAAACTTTACATTCTCTGGGTCTCAGGAACCTTTTTTTGGAGTGGGTTCAGACGTTCTTTCTCCTCGTAAGATTGGGAGTCCTTTAGCTGAAAATTTTGAACTTGGAGGACAATGTTTCACTACCATGCAAACACCTGTTGAGAATTTTTTGGTTTCTTGTGGGAATTGGGATAATAGCTTTCATATTATTTCCGTGGCTGATGGCAGGTTGTTACAGAGCATCCGACAGCATAGTGATGTGGTTAGCTGTGCAGCAGTGACATCAGATGGAAGTATTCTTGCCACGGGAAGTTATGACACTACAGTTATGGTGTGGAAAGTTCTCCGTGATAGGAGCACTGAAAAAAGGGTACGCAGTACACAATCAGAGACACCTCGAAAAGACTATGTCATTGCAGAAACTCCATTCCATGTTCTCTGCGGGCATGATGACATAATTACATGCTTATATGTTAGTGTGGAGCTAGACATAGTTATCAGTGGGTCAAAAGATGGGACTTGCATTTTTCATACTCTACGTGAGGGAAGATACATAAGATCTTTGCATCATCCATCTGGTTGTGGATTGTCAAAGCTCGTAGCTTCTCAACATGGCAGAGTTGTTTTTTATGCTGATGATGATCTTAGTTTGCACCTCTATTCAATAAATGGTAAACATTTGGCTGCTTCTGAATCCAACGGCCGCCTCAACTGTGTTGAACTTAGTCAATGTGGCGAGTTTTTGGTTTGTGCTGGCGATCATGGTCAGATAGTTGTCCGCTCCATGAACTCACTTGAGGTTATTAGTAGGTACAATGGAATTGGAAAAGTAATTGTCTCTCTAACAGTTACTGCCGAAGAATGCTTTCTTGCTGGAACGAAAGATGGAAGTCTTCTTGTATATTCTATTGAAAATCCTCAGCTACGAAAAACTAGTGTTCCTCGAAATACCAAATCTAAACCATCTTCTGCAGGATAG 9654 39.57 MNIVKGVADLIRRTSSGPLAVSGSQANLSHPPGPKIRFGEVGDEAILNELWVRCEKAADKGERKRMFYVFLKQFIVAYKNWKPINSGWLSEDALTSVENLSTSDHTVVGCSSGHPAEIILKLTEEVKQLSSLIVEWRSTADLLGASIGLNLTSEVLDALAIVMRSMHNCKVFGYYSGIQKLTALMKGGLIRAVIQLKTIAGEHSVDEGLSNIVVENTRLLQQMLKYVVSIVHIFIDIDSLLCVEDHSLSMKVPTCEERLMWRQKAVVSVMEAGGINWLVELLRVTRRLNIKEQNIEVELQFLALKILYSALSENPRGQNHFKSIGGLEVLLDGLGLPSKIVLAPKDPAGADQRRFTPFTVIYLDFSPVCEESFEAINKIFFAFMLQEYKLQIGELSGQHDFRWPVLDCKYNVAAQSGECSVVPLANLTHIQSWNEYVVKLCKVLCSFLLAPEDVKPHHPQASSIRIMTPVSLVYGDLSIKWVMRVLVAVFPCIRACSNQNDLPAHLRIVANALQHSVLTAFRKFLVSSPVSLEIFREEGIWDLFFSENFFYFGHAFEEFFLECCTNNDDDFLEKPETYYATSSNSPLKVDGVDIIQIEVISFVEFAATSCGSAHNLPELSALLDTLEQSACNPEVAIALSKSLLRILQISSERTVASFKTLNAVPRLLKVACVQAQEHRRSGNVISSEINHVEDIQSRSNQGHDSRETAQSCLSCLETIMEVFTEFFSIGDEAKSLVLLNSTSIDCLFDLFWEESLRGRVLKHTLELIKIKPISEEDQKAKLYICTKYLEMFAQIKEREKSSTELSIDLLVGIREMLLNDPQYYQTLFRDGECFLHIVSLLNGNVDEANGEKLILNVLQTLTCLLAKNEVSKASFRALAGKGYQTMQTLLLDFCQCHPSDVLLTALLDMLVDGNFDSKLCPIIQNEDVIILYLSVLQKSSEPLQHQGFNIFQQLLRDSISNRASCVRAGMLTFLLDWFGQDNNEDVIVKIAQLIQVIGGHSVSGKDIRKIFALLRSEKVGKQKRYCSLLMSSILSMLTEKGPTAFFDLSGNNSGILIKTPIQWPLNKGFSFSCWLRVENFPIHGTMGLFSFLTENGRGCLAVLAKNKLIYESINLRRQSVRLHVNIVRKKWHFLCITHSIGRAFSGGSLLRCYVDGDLVSSERCRYAKVNEPVTNCTVGAKFNVSLSEEVDTKESVEAAFPFLGQIGPVYLFSDAISSEQVQGIHSLGPSYMYSFLDNDIATFSENPLPRGILNAKESLASKIIFGLNAQASSGKSLFNVSPTLDLILEKNSFEATAMGGTELCSRRLLQRIIYCVGGVTVLFPLISQSDRYESESNGQFGQNVDISGTKECLTAEVIELIASVLDENLPNQHQMHLLSGFSILGFLLQSVNPQQLNMETLAALKHLFNVIANCGFCEILIQDAISSIFLNLSIWIYSAYEVQRELYLFLIQQFDNDPRLLKNLCRLPLILDMICKFYCDKAKCKFASGSKTALHPPVGVLVERPTKDEIRKIRLLLLSLGEMSIRQNIVAADIKALIAFFERNQDVTCIEDVLHMVIRAIARKTVLASFHEQVGFIGGCPIFVNLLQREFEPIRLLSLQFLGRLLVGLPSEKKGLRFFNLPSGKAKSVQDSHKKTSLKMQPLFSAISDRLFRFPPTDNLCAALFDVLLGGASPKQVLQKQNQSDGQKNKSPGSHFAVPQSLVLIFQFLCSCEDISARLKIITDLLDLLDTNPSNIEAFMEYGWNAWLTASVKLDALQQYKVGSLDQVDDKINEQRVIRKLFSVVLLHYIWSVKGGWQQLEETTTFLLMQSEKGQVSFKYFLRDMYEDLLQMLVDLSSGENIFVAQPCRDNTLYLLRLIDDMLIAELDHQLPILATVFDVSLDSTELELYISALHDVLQGESDDWTARYSQHQMEVKDDKMDEEWWHFYDKLWIIISEINGKGPNKTLPKSSTSGGPTFGQRARGLVESLNLPAAEMAAVVVSGGIGSALGGKPNRIVDKAMLLRSEKFPRIILRLVMLYICKSPLEKASRCAQQFISLLPSLVVTDDEQNKNRLQLFIWSLLAVRSQYRMLNNDARIHVISHLIRGTVSCCKSILANSIISTDDSSDTGVFLKETGYIHNLIQKERVTAAIADEASFMKTSKIDHEKQLHELRIRMEENFFNESNNQKVFEDEMQSSLASILIADDNRRAGFQLAYEEEQQNIAEKWMHMFRALIDERGPWSANSSPNISSTHWKLDKTEDMWRRRPKLRKNYHFDEKLCHPPSISPGADITNAENENKSSIVGHIPEQMKRFLLKGVRKITDEGNSELIEDDAEQCEPNASSLKDSSDGQYPELIKDVGDWKDIVQDRKDTSLFSPVTEESEVLMSTPCILVTPKRKLAGRLAVMKNVLHFFGEFLVEGTGGASTFKNFEVLKSSNLTKLNQRQKSLKWSLNLQLDSRKSTSVDNMEVMNDDGYLKRPLKNVKRHRRWDVGKIKGVHWTRYLLRYTAIEIFFSDSVAPVFFNFDSPKDAKDIGTLIVSSRNDYLFPKGSSRNQSGVISFVDRRVALEMAETARESWRRRDITNFEYLMILNTLSGRSYNDLTQYPVFPWVLADYSSEVLDFNKSSTFRDLSKPVGALDLKRFEVFEDRYRNFCDPDIPSFYYGSHYASMGIVLYYLLRLEPFTSLHRNLQGGKFDHADRLFQSIDGTYRNCLSNTSDVKELIPEFFYMPEFLCNSNHYHLGVKQDGEPIGDVVLPPWAKGSPEVFISRNREALESEYVSSNLHHWIDLVFGYKQRGKPAVEAANVFYYLTYEGAVDLDTMEDDLQRSAIEDQIANFGQTPIQIFRKKHPRRGPPIPIAHPLYFAPGSINLTSIISCFTNPPLAILHISMLDTHIVLVSQGLILTVKMWLTTQLQYGGNFTFSGSQEPFFGVGSDVLSPRKIGSPLAENFELGGQCFTTMQTPVENFLVSCGNWDNSFHIISVADGRLLQSIRQHSDVVSCAAVTSDGSILATGSYDTTVMVWKVLRDRSTEKRVRSTQSETPRKDYVIAETPFHVLCGHDDIITCLYVSVELDIVISGSKDGTCIFHTLREGRYIRSLHHPSGCGLSKLVASQHGRVVFYADDDLSLHLYSINGKHLAASESNGRLNCVELSQCGEFLVCAGDHGQIVVRSMNSLEVISRYNGIGKVIVSLTVTAEECFLAGTKDGSLLVYSIENPQLRKTSVPRNTKSKPSSAG 3217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29951982 29999718 + Lsi04G022850.1 Lsi04g02285 662334

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi04g02285 3217 Pfam Concanavalin A-like lectin/glucanases superfamily 1050 1222 - -
Lsi04g02285 3217 SUPERFAMILY PH domain-like 2364 2520 - -
Lsi04g02285 3217 ProSiteProfiles BEACH-type PH domain profile. 2360 2519 IPR023362 -
Lsi04g02285 3217 SMART WD40_4 3031 3070 IPR001680 GO:0005515
Lsi04g02285 3217 SMART WD40_4 3115 3153 IPR001680 GO:0005515
Lsi04g02285 3217 SMART WD40_4 3073 3113 IPR001680 GO:0005515
Lsi04g02285 3217 SMART WD40_4 2966 3005 IPR001680 GO:0005515
Lsi04g02285 3217 SMART WD40_4 3156 3194 IPR001680 GO:0005515
Lsi04g02285 3217 Gene3D - 2363 2516 IPR011993 -
Lsi04g02285 3217 Pfam Domain of unknown function (DUF4800) 2164 2258 - -
Lsi04g02285 3217 Pfam PH domain associated with Beige/BEACH 2371 2516 IPR023362 -
Lsi04g02285 3217 Pfam Beige/BEACH domain 2557 2833 IPR000409 -
Lsi04g02285 3217 Gene3D BEACH domain 2547 2833 IPR036372 -
Lsi04g02285 3217 PANTHER OS06G0678651 PROTEIN 49 3209 - -
Lsi04g02285 3217 SUPERFAMILY BEACH domain 2547 2833 IPR036372 -
Lsi04g02285 3217 PANTHER BEIGE/BEACH-RELATED 49 3209 - -
Lsi04g02285 3217 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 2973 3006 - -
Lsi04g02285 3217 SUPERFAMILY WD40 repeat-like 2943 3204 IPR036322 GO:0005515
Lsi04g02285 3217 ProSiteProfiles BEACH domain profile. 2543 2833 IPR000409 -
Lsi04g02285 3217 Pfam Neurobeachin alpha solenoid region 615 1037 IPR046852 -
Lsi04g02285 3217 Pfam Neurobeachin/BDCP, DUF4704 alpha solenoid region 1289 1808 IPR031570 -
Lsi04g02285 3217 Gene3D - 1039 1236 - -
Lsi04g02285 3217 SMART Beach_2 2555 2833 IPR000409 -
Lsi04g02285 3217 Pfam Neurobeachin beta propeller domain 2854 3203 IPR046851 -
Lsi04g02285 3217 CDD PH_BEACH 2365 2522 IPR023362 -
Lsi04g02285 3217 CDD Beach 2558 2833 IPR000409 -
Lsi04g02285 3217 Gene3D - 2938 3213 IPR015943 GO:0005515
Lsi04g02285 3217 SUPERFAMILY Concanavalin A-like lectins/glucanases 1041 1231 IPR013320 -
Lsi04g02285 3217 ProSiteProfiles Trp-Asp (WD) repeats profile. 2973 3014 IPR001680 GO:0005515
Lsi04g02285 3217 SUPERFAMILY ARM repeat 621 1008 IPR016024 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi04g02285 - - - csv:101204034 5918.19
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02254 Lsi-Chr2:29034010 Lsi04g02285 Lsi-Chr4:29951982 8.04E-08 dispersed
Lsi04g02285 Lsi-Chr4:29951982 Lsi05g01983 Lsi-Chr5:26915593 1.62E-23 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g530 . Blo12g00736 . Bda03g00451 . Bpe04g00414 . . . . Cma01g01471 . . . . . . . . . . . . . . . . . . . . Cone4ag1289 . . . Lsi04g02285 Csa03g04501 Chy04g00200 . . . . . . . . . . Cmo01g01527 . . . . . . Cpe02g00481 Bhi09g02508 . . . Hepe01g2176 Mch11g0715 . Cla11g01433 Cam11g1487 Cec11g1521 Cco11g1517 Clacu11g1649 Cmu11g1467 Cre11g1885 . . . Cme04g00231
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003187 1 6 2 1 1 0 2 0 2 1 2 1 1 1 1 1 2 1 2 2 1 1 1 1 3 1 1 2 2 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi04g02285 Lsi_Chr04 FPKM 20.717022 23.804646 22.337763 23.057714 16.382416 16.317808 21.14003 19.452747 20.924496 21.546553