Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lsi04g02405 | ATGTCGAAGTCCCCCGCCACAGATCAAATTGAGTCTTTGTCACCTTCCGCTTCTAGCCCTCGGGAAAATAATGGAGCAGCAACTATGGATGATCCAGAAACTACAATGGCTACTGTGGCTCAGATTATTGAGCAACTTCATGCAAGTATGTCTTCATCACACGAGAAAGAACTTATTACAGCACGTCTTCTGGGAATTGCTAAAACACAAAAGGATGCTAGAACACTTATTGGCTCTCATTCTCAAGCTATGCCTTTGTTCGTCAACGTCCTCAGAAGTGGGTCTTCTGTCGCAAAAGTTAATGTTGCAAGAACTTTAAGTGTTTTATGTAAAGATGACGAACTACGCTTGAAAGTGCTTCTTGGTGGGTGCATCCCACCATTGCTTTCACTCTTGAAATCTGAATCAATCGAGGCTAGTAAGGCCGCAGCAGAGGCGATCTATGAAGTTTCTTCAAGTGGGCTTTTGAATGATCGCGTTGGAATGAAGATCTTTGTCACAGAAGGTGTGATACCCACCTTATGGGACCAACTAAACCCAAACAATAGACACGACAAAGTTGTAGAGGGATTCGTTACAGGATCCTTGAGAAATCTTTGCGGAGACAAGGATAGTTATTGGAAAGCCACACTTGAGGCTGGGGGAGTGGATATCATTGTTGATCTTCTCTCTTCTGACAGTGCTGCAGTTCAATCAAATGCAGCTTCTCTTCTAGCACGTCTAATGTTGGCCTTCAGTGATAGCATAGCTAAGGTTATAGAATCTGGAGCTGTGAAAGCTTTGCTTGGGCTTGTAAGTAAGAAAAATGATATTTCTGTCCGTGCAAGTGCTGCTGATGCTCTGGAGGCTCTCTCATCAAAGTCAACTGGGGCCAAAAAAGCAATTGTGGATGAGGAAGGTATTCCAGTACTTATCAGGGCAGTAGTTGCCCCTTCTAAAGAGTGTATGCAGGGTAAGCATGGTCAGTCTCTGCAGGAGCATGCAACACGAGCACTGGCCAATCTTTGTGGTGGGATGTCTGCACTAATACTTTATCTAGGAGAACTTTCACAGTCCCCTCGCCTTTATGCACCGATTGCTGATATAGTTGGAGCACTTGCATACACTCTAATGGTTTTTGAGAAGTCCTGTGATGAGGACCCCTTTAATGCTACCAAGATAGAAGATATTCTTGTAACACTACTAAAGCCTCACGATAATAAGTTAGTTCAGGAGCGTGTCCTTGAAGCTATGGCTAGTCTATATGGTAATATATATTTCTCAGAATGTCTAAACCACGCAGAAGCAAAAAAGGTGCTCATTGGACTTGTAACCACTGCTGCTTCTGATGTGCAAGAGTACCTAATACCATCTCTGACTAGTTTATGCTGCAATGGGGTTGGCATCTGGGAAGCCATTGGCAAGAGAGAAGGAGTTCAGTTACTTATATCATTACTGGGGTTATCAAGTGAGCAACATCAAGAGTATGCTGTTCAGTTGCTGGAAATCTTGACTGACCAGGTAGATGACAGCAAGTGGGCTATCACTGCTGCTGGTGGAATTCCTCCATTGGTTCAGTTATTAGAGACAGGTTCCCACAAGGCAAGGGAGGATGCAGCACATATTTTGTGGAATTTGTGCTGCCACAGTGAAGATATTCGAGCCTGTGTTGAAAGTGCAGGTGCCATCCCAGCATTTTTGTGGCTCTTAAAAAGTGGAGGATCGAGGGGCCAGGAAGCCTCTGCTATGGCACTTTCAAAACTTGTCCAAACTGCTGATTCTGCTACTATAAATCAGCTATTAGCTATGCTCTTAGGAGACTCTCCAAAAGAAAAGGCTAACATAATTCAAGTTTTAGGTCACGTGCTTACTATGGCATCGTATGAGGATTTTGTACATAGAGATTCTGCAGCTAATAAAGGCCTGAGAACACTTGTTCAAGTTCTTAACTCGTCAAATGAAGAAACTCAAGCCCATGTTGCTTCTGTTCTAGCAGACTTATTTAGCACAAGGCCAGATATTTCTGATAGTCTTGCAACTGATGAGATTATAAATCCTTGCATGAAGCTCTTGGCCAGCAATACTCAAGTAGCCACTCAATCAGCTCGGGCATTGGCTGCCCTCTCCCAACCCAGCAAGACAAAAGCAATGAATAAGATGTGCCATATTGCTGAAGGGGACGTCAAGCCCCTGATTAAGTTGGCTAAAACATCTTCTGTTGATGCTGCTGAAACTGCAGTTGCTGCCCTGGCCAATCTTCTGTCTGATTCTCAAATAGCCGCAGAAGCTCTAGCAGAAGATGTTGTCTCAGCCCTAACTAAAGTTCTGGGAGAAGGAACTCCCGTTGGCAAGAAGAGTGCAGCTCAAGCCCTTCATCAACTGTTGAACCATTTTCCACCTAGTGAAGTGTTTGCAAGCGAAACGCAGTGTCGTTTCATTGTCCTTGCTCTAGTTGACTCCTTAAGGTCTATGGATTTAGATGGGAACAATGTTGTGGATGCTTTAGAAGTAATTTCACTCTTAGTTAGGACCAAGCTAGGAGCTAGCTTGACTTATGCACCATCGTGTGCCCTTGCTGAGGTTCCTTCAAGCTTGGAACCACTTGTATACTGTCTTGCAGAGGGACCATCTCCACTGCAGGACAAGGTGATAGAAATTTTATCAAGACTCTGTGGAGACGAGCCTGTTATATTAGGTGGTTTGTTAGTTGCAAGATCAAAATCACTTGATTCTCTTGCTAGTAAAATAATAACCTCTTCAAGTCCAGAAGTAAAGTCAGGAGGGGCTGCATTACTCATCTGTGCTATGAAGGAGCATAAACAGCAGTCAGTGGAAGCGCTAGACTCGTTTGGATGTCTTAAACTACTTGTACATGCTTTAGTGGGTTTGATCAAGCAAAATTCTATTTATTCCTCTTCAGACATTGAAGTTAGGACCCATAGAGGCTTTATTAAACGTAGTACTTTCCTAGATGGAGATGGGTTTGCTGCTCCTGACCCAGCCACAGTCACGGGAGGTACCATTGCCCTCTGGTTGTTGTCAATAATTGCTTCTTCTAATGTGGAGAACAAGGTTGCTGTTCTGGAAGCTGGAGGACTTGAGGCCCTGTCTGACAAGCTTGAATTGGAGGATATGGAGGGTATATGGATCAGTGCCCTGCTGCTCGCTATCTTGTTCCAAGATGCAAGTGTTGCGTCATCTGCTGTAACCATGAGCATTATTCCTTCACTTGCCTTTCTGGCAAGATCTGAGGAGGTGAATGATAAATTCTTTGCTGCGCAGGCAATAGCAAGTCTTGTTTGTAATGGTAGCAAAGGAGTAAATCTTGCCATTGCAAATTCTGGTGCAATTGTTGGGTTAATTACTCTAATTGGGTTTGTGGAGTCTGATATGCCAACCCTTGTTTCTTTGGCAGATGAGTTTTCTTTGACACGGAAACCAGATCAAGTTGTTTTTGAGTGTTTATTTGAAATTGAAGAAGTTAGAATTGGGTCAACTGCACGGAAAACTATACCTCTTCTAGTTGATCTTTTAAGACCATTACCAGATAGACCTGGTGCTCCCCCTGTTGCTGTTCAGCTCTTGACCCGTATCGCTGATGGAAGTGACACGAATAAATTAATGATGGCTGAAGCTGGAGCTGTAGATGCTTTGACAAAGTACCTGTCTTTGAGTCCTCAAGACTCAACAGAGGCCATAATATCTGATCTATTGAGAATTTTATTTAGCAACCCCGATCTTATTCGTTATGAGGCATCGACCAGTTCCTTGAATCAACTTATAGCTGTCCTACGTCTGGGGTCAAGAAATGCAAGATTCAGTGCTGCAAGGGCCCTTTTTGAACTTTTTGATTGTGAGTACATTAGAGATTCTGAGCTAGCCAAGCAGGCTTTCCATCCATTAGTTGACATGCTCAATTCCACATCAGAAAGTGAGCAAGGTGTTGCTCTTGCTGCATTAATTAGATTGACTTCAGGATATTCTTCAAAAACAGATCTATTGAATGATGTGGAAGGAACCCCGCTTGACAGTTTATGCAAAATTTTAACAACTTCGTCATCCTTGGAGCTGAAGACAAATGCTGCAGAACTATGTATTGTGCTGTTTGGTAATATTAAAGTAAGAACAAATCCAATCGTCTCTGAATGCATACAGCCACTCATATTGCTGATGCAGTCAGATTCAAGTGCAGCAGTAGAGTCTGGGGCATGTGCACTTGAAAGATTGTTGGATAATGAACAACAAGTGGAGCTCACTTTACCCTATGACATTGTGAACCTCCTTGTTAGTTTGGTCTCTGGAACAAACTATAGATTGACTGAAGCTAGCATCTGCTCTCTCATAAAGTTGGGAAAAGATCGGACTCAACTCAAAATGGATATGGTTAAGGTTGGGGTCATTGATAATTGCCTCGAGTTACTCCCAGATGCACCTAGTTCGTTATGCTCCTCAGTGGCGGAACTTTTTCGCATTTTAACAAATAGTAATGCAATTGCTAGGAGTTCAGATGCTGCAAAAATAGTGGAACCTCTTTTTTTGGTTTTACTTCGTCCAGATTTTAATTTGTGGGGCCAGCACAGTGCCTTACAAGCTCTTGTAAATATTTTGGAGAAACCGCAAAGTCTCTTGACTCTAAATCTTACTCCTAGCCAAGTTGTTGAGCCTCTGATTTCATTTCTTGAGTCCCCATCCCGTGCTGTCCAGCAGCTTGGCACAGAGTTATTATCTCATCTTCTTGCACAAGAGCATTTCCAGCAAGATATTACAACTAAAAATGCAGTTGTGCCACTTGTACAGCTTGCTGGGATTGGGATATTGAATCTACAGCAAACAGCTATAAGGGCATTGGAAAAAATATCCACTAGCTGGCCCAAGTCTGTTGCTGATGCTGGAGGTATTTTTGAGCTATCGAAGGTTATTATACAAGAGGACCCTCAACCTCCTCACGCTCTCTGGGAATCAGCCGCCATGGTTTTGTCAAATGTTTTGCGATTCAATGCTAAGTATTATTTTAAAGTTCCTGTGGTTGTTCTCGTGAAAATGTTGCATTCAACTGTAGAGAGCACTATCACGGTGGCTCTCAGTGCTTTAGTTAATCATGAAGGTAATGATACATTAAGTGCTGAACAGATGGCAGAAGCTGGTGCTATAGATGCATTGGTGGACCTTCTAAGATCTCATCAATGTGAAGAAGCATCTGGAAGGTTACTTGAAACTCTATTTAATAATGTCAGGGTGCGAGAGATGAAGGTTTCCAAGTATGCAATAGCACCCTTATCACAGTATTTATTAGATCCACAGACCAGATCCCAGCCCGGCAAGCTTCTTGCAACTTTAGCCCTGGGAGATCTGTCACAGCATGCCGGACATGCAAGAGCTAGTGACTCTGTATCTGCCTGTCGTGCATTGATAAGCTTGCTTGAAGATGAGGCAACAGAAGAAATGAAAATGGTGGCTATTTGTGCTTTGCAAAACTTTGTCATGCACAGTAGAACAAATAGACGAGCAGTTGCTGAAGCGGGTGGAATATTGGTTGTTCAGGAGCTTCTTTTGTCTCCAAGTCCAGAAATCTCTGGTCAGGCAGCATTGCTGATAAAATTCTTGTTTTCTAATCACACATTGCAGGAATATGTATCAAATGAGCTCATCAGATCTTTGACAGCTGCATTAGAGAGGGAATTGTGGTCTACTGCAACTATCAATGAAGAGGTTTTAAGAACATTGAATGTCATATTCACCAACTTCCCCAAACTCCATATTTCTGAAGCAGCTACTCTTTCCATACCTCATTTGATCGGAGCTCTAAAATCTGGTAATGAAGCAGCTCAGGAAACTGTGTTGGATACCTTATGTTTGCTAAAGCATTCCTGGTCAACCATGCCGATAGACATTGCAAAGTCTCAGGCTATGATTGCAGCTGAGGCCATTCCTATACTGCAAATGCTGATGAAAACTTGCCCTCCTAGTTTTCACGACAGAGCAGATAGCCTTTTGCATTGTTTACCAGGTTGTCTGACCGTTATTATTAAACGCGGGAACAACCTAAAACAGACTATGGGAAGTACAAATGCTTTCTGTCGATTGTCTATCGGGAATGGCCCTCATCGACAAACAACGGTTGTTAGCCACAGTACATCTCCTGAATGGAAAGAAGGATTTACTTGGGCATTTGATGTGCCTCCAAAGGGGCAAAAACTGCACATCATCTGCAAAAGCAAAAGCACCTTTGGGAAGTCTACTCTGGGAAGAGTGACCATTCAGATCGACAAAGTTGTAACGGAGGGATTGTACAGTGGATTATTCAGCCTAAATCATGACGGTGACAAAGATGGCTCTTCACGGACGCTCGAAATTGAAATAATTTGGTCTAACAGAATATCAGATGAAGAACTATGA | 6375 | 42.89 | MSKSPATDQIESLSPSASSPRENNGAATMDDPETTMATVAQIIEQLHASMSSSHEKELITARLLGIAKTQKDARTLIGSHSQAMPLFVNVLRSGSSVAKVNVARTLSVLCKDDELRLKVLLGGCIPPLLSLLKSESIEASKAAAEAIYEVSSSGLLNDRVGMKIFVTEGVIPTLWDQLNPNNRHDKVVEGFVTGSLRNLCGDKDSYWKATLEAGGVDIIVDLLSSDSAAVQSNAASLLARLMLAFSDSIAKVIESGAVKALLGLVSKKNDISVRASAADALEALSSKSTGAKKAIVDEEGIPVLIRAVVAPSKECMQGKHGQSLQEHATRALANLCGGMSALILYLGELSQSPRLYAPIADIVGALAYTLMVFEKSCDEDPFNATKIEDILVTLLKPHDNKLVQERVLEAMASLYGNIYFSECLNHAEAKKVLIGLVTTAASDVQEYLIPSLTSLCCNGVGIWEAIGKREGVQLLISLLGLSSEQHQEYAVQLLEILTDQVDDSKWAITAAGGIPPLVQLLETGSHKAREDAAHILWNLCCHSEDIRACVESAGAIPAFLWLLKSGGSRGQEASAMALSKLVQTADSATINQLLAMLLGDSPKEKANIIQVLGHVLTMASYEDFVHRDSAANKGLRTLVQVLNSSNEETQAHVASVLADLFSTRPDISDSLATDEIINPCMKLLASNTQVATQSARALAALSQPSKTKAMNKMCHIAEGDVKPLIKLAKTSSVDAAETAVAALANLLSDSQIAAEALAEDVVSALTKVLGEGTPVGKKSAAQALHQLLNHFPPSEVFASETQCRFIVLALVDSLRSMDLDGNNVVDALEVISLLVRTKLGASLTYAPSCALAEVPSSLEPLVYCLAEGPSPLQDKVIEILSRLCGDEPVILGGLLVARSKSLDSLASKIITSSSPEVKSGGAALLICAMKEHKQQSVEALDSFGCLKLLVHALVGLIKQNSIYSSSDIEVRTHRGFIKRSTFLDGDGFAAPDPATVTGGTIALWLLSIIASSNVENKVAVLEAGGLEALSDKLELEDMEGIWISALLLAILFQDASVASSAVTMSIIPSLAFLARSEEVNDKFFAAQAIASLVCNGSKGVNLAIANSGAIVGLITLIGFVESDMPTLVSLADEFSLTRKPDQVVFECLFEIEEVRIGSTARKTIPLLVDLLRPLPDRPGAPPVAVQLLTRIADGSDTNKLMMAEAGAVDALTKYLSLSPQDSTEAIISDLLRILFSNPDLIRYEASTSSLNQLIAVLRLGSRNARFSAARALFELFDCEYIRDSELAKQAFHPLVDMLNSTSESEQGVALAALIRLTSGYSSKTDLLNDVEGTPLDSLCKILTTSSSLELKTNAAELCIVLFGNIKVRTNPIVSECIQPLILLMQSDSSAAVESGACALERLLDNEQQVELTLPYDIVNLLVSLVSGTNYRLTEASICSLIKLGKDRTQLKMDMVKVGVIDNCLELLPDAPSSLCSSVAELFRILTNSNAIARSSDAAKIVEPLFLVLLRPDFNLWGQHSALQALVNILEKPQSLLTLNLTPSQVVEPLISFLESPSRAVQQLGTELLSHLLAQEHFQQDITTKNAVVPLVQLAGIGILNLQQTAIRALEKISTSWPKSVADAGGIFELSKVIIQEDPQPPHALWESAAMVLSNVLRFNAKYYFKVPVVVLVKMLHSTVESTITVALSALVNHEGNDTLSAEQMAEAGAIDALVDLLRSHQCEEASGRLLETLFNNVRVREMKVSKYAIAPLSQYLLDPQTRSQPGKLLATLALGDLSQHAGHARASDSVSACRALISLLEDEATEEMKMVAICALQNFVMHSRTNRRAVAEAGGILVVQELLLSPSPEISGQAALLIKFLFSNHTLQEYVSNELIRSLTAALERELWSTATINEEVLRTLNVIFTNFPKLHISEAATLSIPHLIGALKSGNEAAQETVLDTLCLLKHSWSTMPIDIAKSQAMIAAEAIPILQMLMKTCPPSFHDRADSLLHCLPGCLTVIIKRGNNLKQTMGSTNAFCRLSIGNGPHRQTTVVSHSTSPEWKEGFTWAFDVPPKGQKLHIICKSKSTFGKSTLGRVTIQIDKVVTEGLYSGLFSLNHDGDKDGSSRTLEIEIIWSNRISDEEL | 2124 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 31185033 | 31194740 | - | Lsi04G024050.1 | Lsi04g02405 | 662454 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lsi04g02405 | 2124 | SUPERFAMILY | ARM repeat | 1640 | 1994 | IPR016024 | - | |
| Lsi04g02405 | 2124 | Gene3D | - | 1575 | 1786 | IPR011989 | - | |
| Lsi04g02405 | 2124 | Pfam | C2 domain | 1997 | 2095 | IPR000008 | - | |
| Lsi04g02405 | 2124 | ProSitePatterns | EF-hand calcium-binding domain. | 818 | 830 | IPR018247 | - | |
| Lsi04g02405 | 2124 | SUPERFAMILY | ARM repeat | 1175 | 1532 | IPR016024 | - | |
| Lsi04g02405 | 2124 | Gene3D | - | 1364 | 1574 | IPR011989 | - | |
| Lsi04g02405 | 2124 | Gene3D | - | 193 | 417 | IPR011989 | - | |
| Lsi04g02405 | 2124 | Gene3D | - | 1787 | 1994 | IPR011989 | - | |
| Lsi04g02405 | 2124 | SUPERFAMILY | ARM repeat | 855 | 1106 | IPR016024 | - | |
| Lsi04g02405 | 2124 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
| Lsi04g02405 | 2124 | ProSiteProfiles | C2 domain profile. | 1977 | 2094 | IPR000008 | - | |
| Lsi04g02405 | 2124 | Gene3D | C2 domain | 1996 | 2123 | IPR035892 | - | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 1278 | 1318 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 621 | 662 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 1013 | 1053 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 1823 | 1863 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 1364 | 1404 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 1195 | 1236 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 1447 | 1487 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 203 | 243 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 1696 | 1738 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 112 | 152 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 457 | 499 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 708 | 748 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 1573 | 1614 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 501 | 541 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 749 | 789 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 543 | 583 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 288 | 337 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 69 | 111 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SMART | arm_5 | 245 | 286 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | Gene3D | - | 18 | 192 | IPR011989 | - | |
| Lsi04g02405 | 2124 | CDD | C2 | 1998 | 2088 | - | - | |
| Lsi04g02405 | 2124 | Pfam | Armadillo/beta-catenin-like repeat | 505 | 540 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 1995 | 2100 | IPR035892 | - | |
| Lsi04g02405 | 2124 | PANTHER | - | 12 | 2123 | - | - | |
| Lsi04g02405 | 2124 | Gene3D | - | 421 | 588 | IPR011989 | - | |
| Lsi04g02405 | 2124 | Gene3D | - | 589 | 819 | IPR011989 | - | |
| Lsi04g02405 | 2124 | Gene3D | - | 1142 | 1358 | IPR011989 | - | |
| Lsi04g02405 | 2124 | SUPERFAMILY | ARM repeat | 33 | 892 | IPR016024 | - | |
| Lsi04g02405 | 2124 | SMART | C2_3c | 1997 | 2093 | IPR000008 | - | |
| Lsi04g02405 | 2124 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 512 | 554 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | Gene3D | - | 848 | 1133 | IPR011989 | - | |
| Lsi04g02405 | 2124 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 256 | 300 | IPR000225 | GO:0005515 | |
| Lsi04g02405 | 2124 | PANTHER | PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 | 12 | 2123 | IPR044297 | GO:0008017|GO:0010330|GO:0051211|GO:2001006 |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lsi04g02405 | - | - | - | csv:101220047 | 3856.22 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lsi01g00736 | Lsi-Chr1:5795317 | Lsi04g02405 | Lsi-Chr4:31185033 | 0 | dispersed | |
| Lsi04g02405 | Lsi-Chr4:31185033 | Lsi01g00933 | Lsi-Chr1:7536321 | 3.95E-06 | dispersed | |
| Lsi04g02405 | Lsi-Chr4:31185033 | Lsi02g01363 | Lsi-Chr2:18368167 | 1.04E-06 | transposed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi18g243 | . | . | . | . | Bpe02g00638 | . | . | Bma01g02075 | . | . | Cma01g01381 | Cma09g00780 | . | . | . | Cpe06g00615 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Lsi04g02405 | Csa04g01786 | . | . | . | . | . | . | . | . | . | . | Sed05g2372 | Cmo01g01431 | Cmo09g00772 | . | . | . | Car09g00689 | . | Cpe02g00558 | Bhi09g02699 | Tan01g4048 | Cmetu09g1153 | . | . | Mch11g0844 | . | Cla11g01545 | Cam11g1609 | Cec11g1637 | Cco11g1639 | Clacu11g1767 | Cmu11g1583 | Cre11g2000 | . | . | Chy07g00624 | Cme07g00829 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0010101 | 0 | 2 | 1 | 1 | 1 | 0 | 2 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 31 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lsi04g02405 | Lsi_Chr04 | FPKM | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |