Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi05g00364 ATGGCGACGCTAATGTCGGGCTCCAGAATTCAACCAGCAGCTTCTGTTCTTTCCTCCTCCATCAAGCGCCACATGGGTTTTAATTCCCACCTTCGTTCCAATTGCTCGCTTTCTCCTTTTCACCATTCTTCATTCTTCTTCAGGCACTCTGGACCTAGACGTTCTCTCTCTGTTTCCATGTCCGTTACCCCTCTTGAAGCCTGCGTCAAAGCTTCCACTACCGTACCCAACAAGCTCGGCGACTGCCCTTTTTGTCAAAGGGTATTACTGACTTTGGAGGAAAAACATCTACCCTATGACTTAAAGTTGGTAGACATGTCGAACAAGCCAGAATGGTTCTTAAAAATAAATTCAGAGGGCAAAGTTCCCGTTGTTAAATTTGATGAGCAGTGGGTTGCAGATTCAGATATTATAACACAAACACTGGAAGAGAAGTACCCAAATCCACCTTTAGCAACCCCTCCTGACAAATCTTCAGTAGGATCAAAGATTTTCTCCACATTTATTGGTTTTCTAAAGAGCAAGGATCCTAATGATGGAAAAGAACAAGTATTGCTTAGCGAGCTAAGTTCTTTCAATGATCACATCAAAGAGAATGGCCCTTTTATCAATGGGAAAGAGATTTCTGCTGCAGACCTGTCACTTGGTCCAAAGTTGTACCATCTAGAAATTGCATTGGGTCACTATAAGAACTGGTCTGTTCCAGACAGTCTACCTTACGTTAAATCTTACATGAAGAGCATATATTCAAGAGAATCATTTGCAAAAACCCGTGCTCTGCCTGAGGATGTTATTGCTGGTTGGCGTCCGAAGGTCTTTGGTTAA 825 42.79 MATLMSGSRIQPAASVLSSSIKRHMGFNSHLRSNCSLSPFHHSSFFFRHSGPRRSLSVSMSVTPLEACVKASTTVPNKLGDCPFCQRVLLTLEEKHLPYDLKLVDMSNKPEWFLKINSEGKVPVVKFDEQWVADSDIITQTLEEKYPNPPLATPPDKSSVGSKIFSTFIGFLKSKDPNDGKEQVLLSELSSFNDHIKENGPFINGKEISAADLSLGPKLYHLEIALGHYKNWSVPDSLPYVKSYMKSIYSRESFAKTRALPEDVIAGWRPKVFG 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4609965 4616252 - Lsi05G003640.1 Lsi05g00364 662856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi05g00364 274 Pfam Glutathione S-transferase, N-terminal domain 81 150 IPR004045 -
Lsi05g00364 274 PANTHER GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC 5 273 - -
Lsi05g00364 274 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 5 273 IPR044627 GO:0033355|GO:0045174|GO:0098869
Lsi05g00364 274 CDD GST_C_DHAR 151 271 - -
Lsi05g00364 274 Gene3D Glutaredoxin 63 151 - -
Lsi05g00364 274 CDD GST_N_family 82 143 - -
Lsi05g00364 274 Gene3D - 152 273 - -
Lsi05g00364 274 SFLD Glutathione Transferase (cytosolic) 81 251 IPR040079 -
Lsi05g00364 274 SUPERFAMILY Thioredoxin-like 81 149 IPR036249 -
Lsi05g00364 274 SUPERFAMILY GST C-terminal domain-like 145 272 IPR036282 -
Lsi05g00364 274 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 128 273 IPR010987 -
Lsi05g00364 274 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 72 150 IPR004045 -
Lsi05g00364 274 SFLD Main (cytGST) 81 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g00854 Lsi-Chr4:8304460 Lsi05g00364 Lsi-Chr5:4609965 7.80E-92 dispersed
Lsi05g00364 Lsi-Chr5:4609965 Lsi05g01792 Lsi-Chr5:25252352 2.48E-08 dispersed
Lsi05g00364 Lsi-Chr5:4609965 Lsi03g02065 Lsi-Chr3:31963867 7.77E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi05g00364 K21888 - csv:101203335 492.271