Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi05g00364 | ATGGCGACGCTAATGTCGGGCTCCAGAATTCAACCAGCAGCTTCTGTTCTTTCCTCCTCCATCAAGCGCCACATGGGTTTTAATTCCCACCTTCGTTCCAATTGCTCGCTTTCTCCTTTTCACCATTCTTCATTCTTCTTCAGGCACTCTGGACCTAGACGTTCTCTCTCTGTTTCCATGTCCGTTACCCCTCTTGAAGCCTGCGTCAAAGCTTCCACTACCGTACCCAACAAGCTCGGCGACTGCCCTTTTTGTCAAAGGGTATTACTGACTTTGGAGGAAAAACATCTACCCTATGACTTAAAGTTGGTAGACATGTCGAACAAGCCAGAATGGTTCTTAAAAATAAATTCAGAGGGCAAAGTTCCCGTTGTTAAATTTGATGAGCAGTGGGTTGCAGATTCAGATATTATAACACAAACACTGGAAGAGAAGTACCCAAATCCACCTTTAGCAACCCCTCCTGACAAATCTTCAGTAGGATCAAAGATTTTCTCCACATTTATTGGTTTTCTAAAGAGCAAGGATCCTAATGATGGAAAAGAACAAGTATTGCTTAGCGAGCTAAGTTCTTTCAATGATCACATCAAAGAGAATGGCCCTTTTATCAATGGGAAAGAGATTTCTGCTGCAGACCTGTCACTTGGTCCAAAGTTGTACCATCTAGAAATTGCATTGGGTCACTATAAGAACTGGTCTGTTCCAGACAGTCTACCTTACGTTAAATCTTACATGAAGAGCATATATTCAAGAGAATCATTTGCAAAAACCCGTGCTCTGCCTGAGGATGTTATTGCTGGTTGGCGTCCGAAGGTCTTTGGTTAA | 825 | 42.79 | MATLMSGSRIQPAASVLSSSIKRHMGFNSHLRSNCSLSPFHHSSFFFRHSGPRRSLSVSMSVTPLEACVKASTTVPNKLGDCPFCQRVLLTLEEKHLPYDLKLVDMSNKPEWFLKINSEGKVPVVKFDEQWVADSDIITQTLEEKYPNPPLATPPDKSSVGSKIFSTFIGFLKSKDPNDGKEQVLLSELSSFNDHIKENGPFINGKEISAADLSLGPKLYHLEIALGHYKNWSVPDSLPYVKSYMKSIYSRESFAKTRALPEDVIAGWRPKVFG | 274 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4609965 | 4616252 | - | Lsi05G003640.1 | Lsi05g00364 | 662856 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi05g00364 | 274 | Pfam | Glutathione S-transferase, N-terminal domain | 81 | 150 | IPR004045 | - | |
Lsi05g00364 | 274 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC | 5 | 273 | - | - | |
Lsi05g00364 | 274 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 5 | 273 | IPR044627 | GO:0033355|GO:0045174|GO:0098869 | |
Lsi05g00364 | 274 | CDD | GST_C_DHAR | 151 | 271 | - | - | |
Lsi05g00364 | 274 | Gene3D | Glutaredoxin | 63 | 151 | - | - | |
Lsi05g00364 | 274 | CDD | GST_N_family | 82 | 143 | - | - | |
Lsi05g00364 | 274 | Gene3D | - | 152 | 273 | - | - | |
Lsi05g00364 | 274 | SFLD | Glutathione Transferase (cytosolic) | 81 | 251 | IPR040079 | - | |
Lsi05g00364 | 274 | SUPERFAMILY | Thioredoxin-like | 81 | 149 | IPR036249 | - | |
Lsi05g00364 | 274 | SUPERFAMILY | GST C-terminal domain-like | 145 | 272 | IPR036282 | - | |
Lsi05g00364 | 274 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 128 | 273 | IPR010987 | - | |
Lsi05g00364 | 274 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 72 | 150 | IPR004045 | - | |
Lsi05g00364 | 274 | SFLD | Main (cytGST) | 81 | 251 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi04g00854 | Lsi-Chr4:8304460 | Lsi05g00364 | Lsi-Chr5:4609965 | 7.80E-92 | dispersed | |
Lsi05g00364 | Lsi-Chr5:4609965 | Lsi05g01792 | Lsi-Chr5:25252352 | 2.48E-08 | dispersed | |
Lsi05g00364 | Lsi-Chr5:4609965 | Lsi03g02065 | Lsi-Chr3:31963867 | 7.77E-07 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi05g00364 | K21888 | - | csv:101203335 | 492.271 |