Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi05g01216 ATGGACTTCAGAGTGGCTAAGAGGGAAGGTCCTGAGTTCGAAGAGCTTCAAAGTCCAAGCCATGTACGTCTCCCTAATGTTAAAATATGTGCAATGCTCCTAGTTTGTCTCTTTGTATATGATATATTCTGGGTCTTCTTCTCTGAGAGATTCTTTGGGGCAAATGTAATGGTATCTGTAGCAACTCAGCAAGCATCAAATCCTGTTCACACAGTTGCTAATAGTCTGAGTCTTCCTGGGCTGCAATTGATAACTAAGAAGCTGGAGTTACCTGTCAAGATAGTTTTTCCAAGGAACTTACTTGGTGGAGTCATTCCAGGAAAAAATGCCACTGATTTCATGATGCTTGGTCTTGGTGATATGGCAATTCCTGCCATGTTTCTAGCTCTAGTTCTTTGTTTTGACCATCGGAAAAGTAGGGATACAGTCAATCTCTTAGATATCCACACAAGGGGCCACAAGTACATTTGGTATGCCCTGCCTGGATATGCCTTCGGGCTGGTGACCGCTCTAACAGCTGGCGTTTTGACTCACTCACCTCAACCTGCTCTGTTGTATCTGGTGACACCTCTTTGCGGGGTGTACAATGAAAATCCTTTATCCTATTTGGTCTCAGTTGACGGTTTCAACTTCCTTATTGACTGTGGTTGGAACGACCACTTCGATCCTGCTCTTCTTCAACCTTTATCCAGGGTGGCATCGACGATTGATGCAGTTTTGATATCACATCCTGATACACTTCACCTCGGTGCTCTTCCTTATGCCATGAAACAACTTGGACTTTCTGCTCCAGTTTATTCCACCGAACCCGTGTACCGATTGGGTCTTCTTACAATGTATGATCAGTTTATCGCGAGGAAGGAGTTAAGATATCTGCCACGCCACCTATGGGAAATTAAAGAAGCCAACGACATGCTTCCAAAGATGCTACATTTTATAACAAAAGCTTATAAAAGCAATGGAAAACCAGATAAAAGCAAAGGAGAGGGAATAGTTATTGCACCTCATGTGGCTGGGCATCTATTGGGGGGAACTCTATGGAAGATAACTAAGGATGGAGAAGATGTTATATATGCTGTTGACTTCAACCACCGCAAGGAAAGGCATCTGAATGGAACCATTCTAGAGTCATTCGTGCGACCTGCTGTATTGATAACTGATGCTTATAATGCTCTAAACAATCAGCCTTACAGACGCCAAAAGGACAAAGAATTTGGAGATACTATTCAGAAGACCTTAAGAGCTAATGGAAATGTCTTACTTCCTGTTGATACTGCTGGGCGAGTGTTGGAGCTTATTCAAATTTTAGAATGGGTTGTTCTAGCATCAATGGCTAGTTTGGAAGCTGGCTACTCACATGACATATTTGTTGATTGGGCAATGGATGCCAAAAACCTCGTCCTTTTTTCTGAAAGAGGCCAGTTTGGCACTTTGGCCCGCATGCTTCAAGCTGACCCACCTCCCAAAGCAGTTAAGGTAACTGTGTCTAAGAGAGTCCCTTTGACTGGAGATGAGCTTATTGCTTATGAAGAAGAGCAAAACAGGAAAAAGGAAGAAGCTCTTAAAGCTAGTTTGCTTAAGGAGGAACAATCTAAAGCATCTCATGGAACTGATAATGATACTGGCGATCCAATGATCATTGATGCTAGCAGTAATGTAGCACCAGACGTAGGGGGTTCACATGGAGGTGCATACAGAGACATATTGATTGATGGTTTTGTTCCTTCTTCAACCAGCGTTGCTCCAATGTTTCCCTTTTATGAAAATAACTCCGCATGGGATGATTTTGGCGAAGTAATCAATCCTGATGATTATGTAATTAAGGATGAAGACATGGACCAAGCAGCGATGCATGCTGGTGGGGACGTGGATGGGAAACTAGATGAAACTGCCGCTAACTTGATTCTGGATATGAAGCCTTCGAAAGTTGTATCTAATGAATTAACAGTTTTGGTGCATGGAACCGCAGAGGCCACTGAGCATCTTAAGCAGCATTGCCTTAAAAATGTCTGTCCCCATGTCTATGCCCCCCAAATTGAAGAAACGATCGATGTTACTTCTGATTTATGTGCATATAAGGCTATCGTTTCATATACTGAGTCGAAGAAATCTCCAATTCTTGAATTTCAGGTTCAACTTTCAGAAAAGCTGATGAGTAATGTGCTGTTTAAGAAGCTAGGTGATTATGAAATCGCTTGGCTTGATGCTGAAGTAGGGAAGACCGAGAATGGAACGCTGTCTTTACTTCCCCTCTCAAAGGCTGCTTCGCCTCATAAATCTGTTATTGTTGGTGATTTAAAAATGGCTGACTTCAAACAATTTCTTGCCAGCAAGGGAATACAGGTTGAATTTGCTGGGGGTGCTTTGAGATGTGGCGAGTATGTCACCCTACGCAAGGTTACAGATGCAAGTCAAAAGTTGAGACGCCTCGTTGAATATGGAAGAGATCCAGCAATTTTAAGATTTTTCATGGCTTCCACTCCTCCCACGTGTTCACCCAGCTCTCTCCAGCTTCGCCTCGCTCTCAATTGCAAGAATTGCGGCAAATTCCCTTCAGTTCTTGTTCGGGCGAGAGTGAGGAAATTGGATCCTCGACTCCGCGTAATTTGTCACCCTATTGTTCATAATGGCGCCAAAATCGAGAGAGGAAATGGACTGCGTCGCAGTGGACTTTGTTTTGCTGGATCGAAGTCGACGGCTGATGGATTCTCTGGGTGGTCGGAATCGGATTCCCAGGGGGAGGTTTTGGACTTGCGGAGAAAGAAGTGGTTTGGAGGATTGGTGGGGATTGGAATTACTGGATTCATCCTTGTCTCCGGAATCACCTTTGCAGCATGGTCAATAAACAAGCAGAATAGTTCCAGACAAAAGCCGCAAATGGAGGCCTTAAGTATGCAGCAAGAATTATTGTTGGACTCTGATACTGGAAATGATAGGCTTGGTGAAGATGAAAAGGAAGATAACAGTGTGAATGCAGATGATGAGACTCTCGCTGGTAGAACAGGTAACCAAGAGGACTCTTCTTCATGTACAGAAAATGAAGAAACTCTCAACAAAAATAGGGTTGGTGACAGTGTTGATGTTGGGGAGTTAGCAGAAAATGATGTTGAATCTTCATCCAGTAATAACGATGTCAATAATGTTGCTTCCTTGCAAGAAGATTTCCAATCTGATTCCTCATTAACTGTTACATCAGTTGCTCCCGGAAGTTTGAGTTCACTTATCTCACCTGAATCTGAGTTTGATTCTAATGTAGCTTCTTGTTTTAAAGATGTAAACAACTGTCATTCTGGTGCAGAAGTCTCAACTTCTGAACCTGAAATGAATATATTGAAAGATGAACCAGACAACTTGCCTAACTCTAATACTAATTCATTAAACCTTAAAACTGATATTCAGGATGAAAGTCCTGACACTGGTGAAAATTATGATTTCAGCTCCAAGAAGTTACCAGTTTATGATGATAGTTCATCAAACTATAATTCTGGCAATCAGGATGAGACACTTGGTCCTGTAAATGAAATTACAGATTCTTCATTGCAAGGATTTTCTAGAATATCTGGCGACACAACCAAGGAATCAGGATTATTTGACAGAGAGACTGTGGCTGAATCATCTGACGGAGTTCTGAGCCCCAGCAAAACTGAACAGCTCTTATCTGAGGATACTGCATCAACCATAGAACAGCAAGTAGAAAGAGGATTATCTGAAGCAGCATTAGTCTCTATCACAGATTATCCATCGGCAGATGATCAAGAGAAAAATCATGAAACTATCAAGAATAGTGTTCCTGCTCCTTTGGTTTCTGCAGCTGTTAAAACACTTCCTGGCAAGGTCCTAGTTCCTGCAGTAGTGGATCAGGTTCATGGGCAGGCATTGGCAGCACTGCAAGTTTTAAAGGTGATAGAGGCTGACGTTGAACCTAGTGATCTATGTACTCGTCGGGAATATGCTCGTTGGCTGGTGTCTGCAAGCAGTGCTCTTTCAAGGAACACAACATCCAAAGTATACCCAGCAATGTATATAGAGAATGTTACCGAGCTTGCTTTTGATGATATTACACCCGAAGACCCTGATTTTGCATCTATTCAAGGTTTGGCAGAAGCTGGACTGATTTCAAGCAAGCTTTCGAGAAATGATATTTCTTCTTCATTGGACGAAGACCAGGGTCCTTTATATTTCTCTCCCGAAAGCCCCCTATCACGTCAAGATCTCGTGAGTTGGAAGATGGCCCTTGAAAAAAGACAGCTTCCAGAGGCAGATAGAAAGATGCTCCACCAAGTTTCTGGATTTATTGATACTGATAAGATCCATCCAGATGCTTGTCCTGCACTTGTTGCTGATCTTTCTGTAGGAGAACAAGGAATAATAGCTCTTGCATTTGGATATACAAGGCTTTTCCAGCCAGATAAGCCTGTAACGAAAGCACAAGCTGCCATTGCTCTTGCAACTGGGGAGGCTTCAGATATAGTAAGTGAGGAGCTTACAAGGATTGAAGCTGAATCAATGGCAGAAAATGCTGTTGCTGCGCATAGTGCTTTGGTAGCTCAAGTTGAGAAAGATATAAATGCTAGCTTTGAGAAAGAACTTTCCATCGAGAGAGAAAAGGTTGAGGCTGTGGAGAAAATGGCAGAAGAGGCCAAGCAAGAATTGGAAAGATTAAGATCTGAAAGAGAGAGAGATAGTATCACCTTGATGAGGGAACGCGCTTCTATTGAATCGGAAATGGAAGTTTTTTCAAGGTTAAGGAATGAGTTGGAGGAGCAGTTGCAAGGCCTGATGAGTAATAAAGTAGAGGTATCCTTTGAAAAGGAAAGAATCAACAAACTCAGGAAAGAAGCTGAAATTGAAAATCAGGAGATTTCCCGCCTGCAGTATGAGCTTGAAGTTGAGAGAAAGGCGCTTTCCATGGCCAGAGCTTGGGCCGAGGACGAAGCAAAAAGAGCAAGAGAACAAGCAAAAGCACTCGAAGAGGCTAGGGATCGCTGGGAAAAGCATGGCATCAAAGTAGTCGTTGACAGCGATCTTCGTGAACAAGAATCTGCTGGCGATACCTGGCTTGATTCTAGCAAACAGTTTGCAGTCGAAGAAACCACGGACAGGGCCGAGAACTTAATGGAGAAGCTGAAAAGAATGTCTACAGAAGTAAGAGGGAAATCGAGAGATGTAATTGAGAAGATCATCCAGAAGATAGCTTTGCTAGTATCAAACTTGAGACAATGGATTTCCAAAAGTGGAGAAAAGGCTGAAGATCTAAAGAATGTGGCGATTTCAAAGGCAAGTAGATCAGCAACAGAGTTGCAACAGAGCACTGCAGAGTTGAGCTTGGCCCTGAAGGAGGGAGCAAAGCGAGTTGTGGGAGATTGTAGGGAAGGAAAAACTCCCGAAACCCTAGTCCTTCGCTTCCCTCGCCTCCGATCATTTGGTTCTGGTCCATACGAGAAGGCAATGGCTCCGAAGCAGCCGAATACTGGTCTCTTCGTGGGACTTAACAAAGGACACGTAGTTACAAAGAAAGAGTTGGCTCCGCGCCCCTCAGATCGCAAAGGAAGTTGTTTTAGCTGTTGGTGGATGGAGAAAAGTAGCAAAAGAGTTCTCTTTGTAAGGAATTTGATCCGGGAAGTTGCTGGCTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTTAAAGTTGGAAAGGACAAGAGAGCACTGAAAGTGGCTAAGAGAAAGTTGGGAACTCACAAGAGAGCCAAGAAGAAGAGAGAAGAGATGTCCAGCGTTCTCCGCAAGATGAGCTTCCTGCAAATGGGCACTGCCGAGGAGATTGGGCAACAGCTCGAATTCGATGTAGAAGACACTATATTTGTTGCGGTGGGCACCGATGTTGACGACGCCAAAGCTACTCTCATTTGGGCTGTCCACAACTTCGCTGGCAAGAGTTTCTGTCTGCTTCACGTGCGACTTGGGAATCCGTCAAGACGAGAGTCGTCTGTAGCTAATTCCGGCACCGCCTCGTCCAATACCAAACAAATCTCAATCGTACACTTCCTGCAAATGGGCACTGCCGAGGAGATTGGGCAACAGCTCGAATTCGATGTAGAAGACACTATATTTGTTGCGGTGGGCACCGATGTTGACGACGCCAAAGCTACTCTCATTTGGGCTGTCCACAACTTCGCTGGCAAGAGTTTCTGTCTGCTTCACGTTCATCATCTTTCTCCCAAAAAAGAAGAGCCATCTTCCTATACACTAAAAGAACATGTAGCAAAGGCATACGAGGAACCCAAAAGCCAAAAGCCTTTTGAACTTCTTAATCAATATGTTCTCATTCTTGCCAAACTGGGGGTACAAGCCCAAAAAGTATGGACTGAGACGAACAACGTTGAGAGAGGGATTGTTGAAATTATTGCTCAGTACAATGCTCAAGGAAAGGAGAATGCGTGTGATAGGGGAGTAAAAGGTGGACATCCAGTTAGCCAGAGTGGTTTGCAAGAAGAAGCCTCGATGAATGTCAAGTCCATAAAAGACTTTGAGGGAGTGAAGGCTTGGGTAGAGGAAGATGGTGCGGGTGCTGAATTCAAGGCTAAATCATTAGAAAGCTCGTGTATGGAGGAGGTGAAGAAAAGAAAAGAGATGGAAGAACTTTTAGAGAGAGAGAAAAAGGAAGTAGAACGAATGAACAAAGAGCATGATGAGCTTTTAAAAGAACTACAACATGTCCAAGAGCAAAAATCATTCCTTGAGAGAAAAGCTTCAGAGTACCGGTGTGAGGTGGAGGAGTTGGAGAAGAAGATGTTTGCAGCTGTTGACCTCTTAGTAAGTTTCAAGGAAAAACGAGATAAGTTGCAGACAGAGAATGAAGGTGCAATGGACAAGCTTCGAAAGCTGAAGAATATTGTTAAAAGGGAACCTTCACACTATCGCAGTGCAGAAATGCCTACGTTCTCCTTCATGGAAATAATTGAAGCAACAAGAAACTTTGACCCTTCCTGGAAGATTGGTGAGGGAAGACATGGTAGTGTTTATAAAGGCCTCCTTCGTCACTTGGATGTTGCTCTAAAAATGTTTGCTTCGTATGGTTCTTATTCCCAATCAACGTTCCAATACGAGGTTGAGGTCTTGAGCAGGGTTAGGCATCCCAACCTGGTTTCAATTATTGGAGCATGTCCAGAATCTAGGTTAATAGTGTATGAGAATTTGAAAAATGGCAGCTTGGAAGACAACCTTGCCTGCAAAAATCACAATCGCCCACTTCCATGGCAGATACGGATTCGCATTGCTGCTGATATCTGCTCAGCCCTTATATTTCTACATTACAGCGACCCTTGCATTGTCCATGGAGATATAAAACCAAGCAAAATCCTACTTGATGCCAATTTTATTGCCAAACTAGGTGGCCTGGGCATCTCTCGTTTGATCCCGCAAGAAGAGAAGGCCTTTAATTCGGCATCAGTATGTGATATGTTGAAAGAAAATAATCCATATATAGATCCCGAATATCTCGAGACTGGAAGGTTCACTCCAGAATCAGACGTCTACTCTCTTGGTGTTATTTTGCTGCGAATTTTAACTGGCAGAGCACCTTCGGGAATTGTAAAAGATGTAAGATGTGCTCTAGAAAATGACGAGATTGGTGTCATCTTGGACTCATCAGCTGGAGACTGGCCACATGATCTAGCAGAGCAGTTAGCTCTTGTGGCATTGAGGTGCTGTGAGAAGGAAAAGTTGGATCGGCCTGACCTTGTCTCAGAATTATGGGGTGTTTTGGAGCCAATGAGATCCATTGCCTCAGCATCGTGTTCGAGTTTGAAGAAACACTCTCGAGTGCCTGCCCATTTTACGTGTCCCATTTTTCAGGAAATTATGAAAGATCCACTAATTGCTGCAGATGGATTCACATACGAAGCTGATGCAATAAGAGGATGGTTCAAAAGTGGCCACAACACTTCTCCGATGACAAATCTTAAACTTGAGCACTGTGATCTTGTGCCAAATTATGCTCTTCTGAATGCAATTCAAGAGTGGCAGCATCAGCTATGA 8022 43.44 MDFRVAKREGPEFEELQSPSHVRLPNVKICAMLLVCLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIVFPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLCFDHRKSRDTVNLLDIHTRGHKYIWYALPGYAFGLVTALTAGVLTHSPQPALLYLVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKELRYLPRHLWEIKEANDMLPKMLHFITKAYKSNGKPDKSKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEWVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGTLARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGTDNDTGDPMIIDASSNVAPDVGGSHGGAYRDILIDGFVPSSTSVAPMFPFYENNSAWDDFGEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKAIVSYTESKKSPILEFQVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAASPHKSVIVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKLRRLVEYGRDPAILRFFMASTPPTCSPSSLQLRLALNCKNCGKFPSVLVRARVRKLDPRLRVICHPIVHNGAKIERGNGLRRSGLCFAGSKSTADGFSGWSESDSQGEVLDLRRKKWFGGLVGIGITGFILVSGITFAAWSINKQNSSRQKPQMEALSMQQELLLDSDTGNDRLGEDEKEDNSVNADDETLAGRTGNQEDSSSCTENEETLNKNRVGDSVDVGELAENDVESSSSNNDVNNVASLQEDFQSDSSLTVTSVAPGSLSSLISPESEFDSNVASCFKDVNNCHSGAEVSTSEPEMNILKDEPDNLPNSNTNSLNLKTDIQDESPDTGENYDFSSKKLPVYDDSSSNYNSGNQDETLGPVNEITDSSLQGFSRISGDTTKESGLFDRETVAESSDGVLSPSKTEQLLSEDTASTIEQQVERGLSEAALVSITDYPSADDQEKNHETIKNSVPAPLVSAAVKTLPGKVLVPAVVDQVHGQALAALQVLKVIEADVEPSDLCTRREYARWLVSASSALSRNTTSKVYPAMYIENVTELAFDDITPEDPDFASIQGLAEAGLISSKLSRNDISSSLDEDQGPLYFSPESPLSRQDLVSWKMALEKRQLPEADRKMLHQVSGFIDTDKIHPDACPALVADLSVGEQGIIALAFGYTRLFQPDKPVTKAQAAIALATGEASDIVSEELTRIEAESMAENAVAAHSALVAQVEKDINASFEKELSIEREKVEAVEKMAEEAKQELERLRSERERDSITLMRERASIESEMEVFSRLRNELEEQLQGLMSNKVEVSFEKERINKLRKEAEIENQEISRLQYELEVERKALSMARAWAEDEAKRAREQAKALEEARDRWEKHGIKVVVDSDLREQESAGDTWLDSSKQFAVEETTDRAENLMEKLKRMSTEVRGKSRDVIEKIIQKIALLVSNLRQWISKSGEKAEDLKNVAISKASRSATELQQSTAELSLALKEGAKRVVGDCREGKTPETLVLRFPRLRSFGSGPYEKAMAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGSCFSCWWMEKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMSFLQMGTAEEIGQQLEFDVEDTIFVAVGTDVDDAKATLIWAVHNFAGKSFCLLHVRLGNPSRRESSVANSGTASSNTKQISIVHFLQMGTAEEIGQQLEFDVEDTIFVAVGTDVDDAKATLIWAVHNFAGKSFCLLHVHHLSPKKEEPSSYTLKEHVAKAYEEPKSQKPFELLNQYVLILAKLGVQAQKVWTETNNVERGIVEIIAQYNAQGKENACDRGVKGGHPVSQSGLQEEASMNVKSIKDFEGVKAWVEEDGAGAEFKAKSLESSCMEEVKKRKEMEELLEREKKEVERMNKEHDELLKELQHVQEQKSFLERKASEYRCEVEELEKKMFAAVDLLVSFKEKRDKLQTENEGAMDKLRKLKNIVKREPSHYRSAEMPTFSFMEIIEATRNFDPSWKIGEGRHGSVYKGLLRHLDVALKMFASYGSYSQSTFQYEVEVLSRVRHPNLVSIIGACPESRLIVYENLKNGSLEDNLACKNHNRPLPWQIRIRIAADICSALIFLHYSDPCIVHGDIKPSKILLDANFIAKLGGLGISRLIPQEEKAFNSASVCDMLKENNPYIDPEYLETGRFTPESDVYSLGVILLRILTGRAPSGIVKDVRCALENDEIGVILDSSAGDWPHDLAEQLALVALRCCEKEKLDRPDLVSELWGVLEPMRSIASASCSSLKKHSRVPAHFTCPIFQEIMKDPLIAADGFTYEADAIRGWFKSGHNTSPMTNLKLEHCDLVPNYALLNAIQEWQHQL 2673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 20026351 20069699 - Lsi05G012160.1 Lsi05g01216 663708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi05g01216 2673 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 824 1792 - -
Lsi05g01216 2673 Gene3D - 442 500 - -
Lsi05g01216 2673 ProSitePatterns Ribosomal protein L36e signature. 1880 1890 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lsi05g01216 2673 ProSiteProfiles U-box domain profile. 2602 2673 IPR003613 GO:0004842|GO:0016567
Lsi05g01216 2673 Pfam Signal peptide peptidase 21 189 IPR007369 GO:0004190|GO:0016021
Lsi05g01216 2673 CDD RING-Ubox_WDSUB1_like 2607 2648 - -
Lsi05g01216 2673 Coils Coil 509 529 - -
Lsi05g01216 2673 Coils Coil 1569 1627 - -
Lsi05g01216 2673 Pfam Protein tyrosine and serine/threonine kinase 2326 2575 IPR001245 GO:0004672|GO:0006468
Lsi05g01216 2673 MobiDBLite consensus disorder prediction 1151 1191 - -
Lsi05g01216 2673 MobiDBLite consensus disorder prediction 1115 1133 - -
Lsi05g01216 2673 Gene3D Transferase(Phosphotransferase) domain 1 2394 2602 - -
Lsi05g01216 2673 Coils Coil 1695 1722 - -
Lsi05g01216 2673 MobiDBLite consensus disorder prediction 1099 1220 - -
Lsi05g01216 2673 Gene3D 60S ribosomal protein L36 1815 1930 IPR038097 -
Lsi05g01216 2673 ProSiteProfiles Protein kinase domain profile. 2321 2587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi05g01216 2673 Pfam Ribosomal protein L36e 1824 1925 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lsi05g01216 2673 Gene3D Phosphorylase Kinase; domain 1 2300 2393 - -
Lsi05g01216 2673 SUPERFAMILY Protein kinase-like (PK-like) 2296 2575 IPR011009 -
Lsi05g01216 2673 Pfam Metallo-beta-lactamase superfamily domain 203 384 IPR001279 -
Lsi05g01216 2673 MobiDBLite consensus disorder prediction 1206 1220 - -
Lsi05g01216 2673 Pfam Cleavage and polyadenylation factor 2 C-terminal 743 801 IPR025069 -
Lsi05g01216 2673 SUPERFAMILY Metallo-hydrolase/oxidoreductase 188 685 IPR036866 -
Lsi05g01216 2673 Pfam U-box domain 2603 2671 IPR003613 GO:0004842|GO:0016567
Lsi05g01216 2673 SUPERFAMILY RING/U-box 2602 2672 - -
Lsi05g01216 2673 Gene3D - 189 441 IPR036866 -
Lsi05g01216 2673 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 824 1792 - -
Lsi05g01216 2673 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2603 2673 IPR013083 -
Lsi05g01216 2673 MobiDBLite consensus disorder prediction 994 1016 - -
Lsi05g01216 2673 Coils Coil 1523 1564 - -
Lsi05g01216 2673 ProSitePatterns Protein kinases ATP-binding region signature. 2327 2348 IPR017441 GO:0005524
Lsi05g01216 2673 CDD CPSF2-like_MBL-fold 189 390 IPR035639 -
Lsi05g01216 2673 Coils Coil 2196 2258 - -
Lsi05g01216 2673 Coils Coil 1639 1666 - -
Lsi05g01216 2673 Coils Coil 2266 2293 - -
Lsi05g01216 2673 MobiDBLite consensus disorder prediction 974 1026 - -
Lsi05g01216 2673 SMART Ubox_2 2606 2669 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g00297 Lsi-Chr4:2985210 Lsi05g01216 Lsi-Chr5:20026351 1.79E-60 dispersed
Lsi05g01216 Lsi-Chr5:20026351 Lsi09g01569 Lsi-Chr9:23802565 1.21E-13 dispersed
Lsi09g00248 Lsi-Chr9:2593995 Lsi05g01216 Lsi-Chr5:20026351 7.51E-10 dispersed
Lsi09g01570 Lsi-Chr9:23816173 Lsi05g01216 Lsi-Chr5:20026351 3.27E-12 dispersed
Lsi04g00705 Lsi-Chr4:6453020 Lsi05g01216 Lsi-Chr5:20026351 2.56E-13 transposed
Lsi10g00243 Lsi-Chr10:3998695 Lsi05g01216 Lsi-Chr5:20026351 4.48E-13 transposed
Lsi05g01216 Lsi-Chr5:20026351 Lsi05g02044 Lsi-Chr5:27399888 1.04E-09 wgd
Lsi05g01216 Lsi-Chr5:20026351 Lsi09g00468 Lsi-Chr9:4922309 6.00E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83656 PF07714 PK_Tyr_Ser-Thr 6.20E-32 CL0016 Lsi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi05g01216 - - mcha:111011467 1525.38