Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi05g01493 ATGGGCCAATCCAATGATAGTGAAATCAATTTTCACGGGCTCGATAATTCCTCTAAAATCTGCAAACGGTCCATAAAATGGGTCGACAACGTCGAATATGCCCATTGTTTATGCGCCCGACATGTCGGCATGAGCCGTTTTATTTATCGGCCCAATCCGACGACTAAAGGGGCCGAAACCCGATTTATCTCACGTGCGAAGCGTGCTCTGACGGCCATCTCCCTAACACGAGCAGGTGGTAAACACAGCTCCATCGTCCTCTCGAGGGCTCGCGTTGTTTCAGTTTATTATGTATTTTACATGCTTCAATTATATAGTGTATTTGTTGCTATCTTAGACAAGATGGCATCTTCGCAAAATGTTGAGTTGGAAGCAGCGAAGTTTCTGCACAAACTCATTCAAGAATCTAGAGATGAACCAGCAAAATTGGCTACAAAACTCTACGTGATACTACAACACATGAAATCAAGTGGGAAAGAACATTCCATGCCATATCAAGTAATTTCGAGGGCCATGGAGACTGTCATCAACCAACATGGTCTTGATATTGAAGCTTTGAGGGCATCCCGCCTTCCGATGACTGCTGGAGCTCAGATGGGCGATTCTTCAACTGCACAGTATGCGGGTTCTTCCAGTGTTGTTGGTGCTGCTAAAGATTCCAAAATGGGTATATCTGGAAGTGAGATGTCCAAAAGTGGCCCACTTGCTTCAAGCAAGCCGCCTGTTGGCCCAAGTAGTACAGATCATGATTATTATCCAGGTTCTGCAACCCATCGGAGTGGTCAATCTTTTGATCAAGAAAGTCCATCTAGTTTGGATTCAAGATCTGCCAACTCACAGTCACAAGAGAAGCATGATTCAGTGAATTGGGACAAACAATTAAATGATAAGGACAGTAAAAAGGGCAGCAAGAAAAGGAAGAAGGTGGATACATCAGTTGTGGAACCTAGTGACAATACTCATCAACTTGATACACGCAACTCATTGGTTAATCCTAGGAATGTAAAGACGAACAGGGTTGAACCGCCGGCATATCTAGTTAAGGGAGGCAATATTGAACAGGCAAAGCATGGATTGACAAAAGCTACTGAAAAGCCCATTGACCCTCAATTGTATTCTGTAAACCGCGGTGATGGGACATCTACCTCCAATGAAAAAGTTTTGGAGAGCGAACTACCTATGTCTAGCACATCATCAGTTGATGCTACAAAGATGACCCAGGGTACATGGCGGAACACTGCACCAGAAATGAGTATGTTACGTAACCCAGTTTCTAGAGAAGCAGGAAAGCTTCCTGTTTCTCAGGTTCCTACCTCGTCGCAACCTCGCTTGCCTTTCAAGGAACAACAATTGAAGCAACTTAGGGCGCAGTGCCTTGTGTTTTTAGCATTCAGAAATGGTTTAATGCCAAAGAAACTGCATCTTGAAATTGCCCTCGGGAATAATTTTCCTAAAGAAGAGGGGCTTCGCAAAGATGTTGATCCTAGAGGTATTGCTCAATCTTTTAACGAATCCAGAAGTTCCACTGAAGTCATGATGCCATCAGGAAAATTGGATGCTGCAAGGGAAACAGGTATGGTGGCCCCAGGCGCCATGTCGGCTGGAAGAATCTTTGAGGCTGACTCCATGAAAGATGTAGATAATAGGAGAGTGGAGGATAAAAAGGGTACACCTTCCGATTATTCTGTTCAAGCAGAAGTAAGAAAGGCAGAGGCTGAAGGTATGCGGGAAAAAGCAACTTCTCAAACATGCTTGAGCTCTTTATCACATCCGCCTGACTTTTCAGGTGCAAGGGGGGTTTTAACTGCAAATAATCCTGTCGAGGACTTGGAGAATAGCAATCTTCAAGCCACTGCTGCCGTGGGTATGAGCAAGCCACTAAACCCTGAAACAGTTAGCTGGACAGGAATTGGCAGCACAAATGAGGTTTCTAGGGGAAGTATACCAGCCTTTGCTAGTCAGCATGAGCTGGTAGTTGATAGGAAAAATGATGTATCTGCTCAGTTGCACGTTGTTCGGAACAATAGTGGTTTAGGGAGTCAGCATATTGATAGCCAGTCTTCTTTTTCAATGGGAGAACGGTGGAAACCTGTCTCTGGGACATATGATCAGTACCATGCTGTAATGCCTTCTAGAGATGCTAGTGTGATCCCAAATCTTGCATCTCACGATGATACGCATGTGCCAGAATCTGAATCCAGATGCGTCACAGAAGTGCAAAAAGTGGCATCTATTGATGAAGGGAAAAATGGCAGCCTAAATACTCTGGAACAAGAAGATGATGCGCATTTAGTTCATTTCCTTGGGTATCATTTTCCTTTGCAGGATACTGTCAGCTCGTCAGAAGATATATCTGCAAAAACTAGAAGTGTTATAGAATTGAAAAAGCTTCAACTCTTGCAGCTTCAGCGCCGCCTCAGGAATGATTTTCTCACCGATTTCTTCAAACCAATTTCAACTGAGATGGACCGATTGAAATCTTTCAAGAAGCATAAACATGGTAGGAGGATTAAACAACTTGAAAAATTTGAGCAGAGAATGAAGGAGGAGAGGCAAAAGAGAATTCGGGAGAGGCAAAAGGAATTCTTCGGTGAGATAGAAGTTCACAAGGAAAGACTTGATGACGTATTTAAAGTTAAGAAAGAGAGGTGGAAGGGTTTCAATAAGTATGTCAAGGAGTTCCACAAAAGGAAGGAACGAATTCATCGTGAGAAGATTGACCGAATCCAGCGTGAGAAGATCAATCTTTTGAAGATCAATGATGTAGAGGGGTATCTTCGAATGGTGCAGGATGCAAAATCAGATCGTGTTAAGCAACTTCTCAAGGAGACGGAGAAATATCTTCAAAAGCTTGGATCCAAGCTACAAGAGGCAAAATCTATGGCAAGCGATATGGATGATGGAGGAGCTGTGAATGTTGCTGAAAAGAGTGAAGCTGCGATTGAAAATGAAGATGAAAGCGATCAGGCAAAGGCAAGTGGTTCTCTGCTCACTTTCTTGCATCAGTTTTTGTTTCATTCACTGATTACATTGGTTTTCTTCTCACAGCATTATTTAGAAAGTAACGAGAAGTACTACATGATGGCTCATAGTGTTAAGGAAAGCATAGCCGAGCAGCCTTCTTGTCTTCAGGGAGGAAAGTTGAGGGAGTATCAGATGAATGGCCTTCGCTGGCTTGTTTCATTGTATAACAACCATTTGAATGGAATTCTTGCTGATGAAATGGGGCTTGGAAAAACTGTTCAGGGTAATTTCCAGGTAATTTCCCTAATCTGTTATTTGATGGAGACTAAGAATGATCGAGGTCCATTTTTGGTGGTTGTGCCATCATCCGTTTTACCTGGATGGGAGTCAGAGATCAACTTCTGGGCCCCTAGTGTGCTTAAAATTGTGTATTCTGGGCCTCCAGAAGAGCGGCGGAAATTATTCAAAGAAAGAATTGTTCATCAGAAATTTAATGTACTTCTGACCACATACGAGTATCTGATGAACAAGCATGATAGGCCAAAACTGAGCAAGATTCATTGGCATTATATCATAATTGATGAAGGCCATCGCATAAAGAATGCTTCATGCAAGTTGAATGCTGATTTGAAGCACTATCAGAGTTCTCACAGATTACTCTTGACTGGAACACCACTACAGGCCTTGCTTTCTGAAGAGGAGAATCTTTTGATCATAAATCGACTTCACCAAGTGCTTCGCCCGTTTGTTCTTCGGAGGCTTAAACACAAGGTGGAAAATGAACTGCCAGAAAAGATTGAAAGACTTGTTAGATGTGAGGCTTCTGCATATCAGAAACTTTTGATGAGGAGGGTAGAGGATAACCTTGGTTCAATAGGAAGTACAAAGGTTGATAATTTGATACCTAAGCATTACCTGCCACCAATTGTTAGACTCTGTGGAAAGCTTGAGATGTTAGATAGAATATTACCAAAGCTAAAAGCAACTGATCATCGGGTTCTCTTCTTTTCCACCATGACTAGACTGCTCGATGTTATGGAGGAATATCTTCAGTGGAAACAATATCGATATCTACGATTGGATGGACATACATCTGGGGGTGATCGTGGTGCACTGATTGAGTTATTTAACCGGCAAGATTCTCCCTATTTTATATTCCTTCTCAGCATTCGAGCTGGTGGTGTGGGAGTGAATCTCCAAGCCGCTGATACAGTTGATCTACAGGCACAGGCAAGGGCTCATAGGATTGGCCAGAAGAGGGACGTGCTTGTTCTTAGATTTGAAACAGTTCAAACGGTTGAAGAACAAGTCAGAGCTGCTGCGGAGCATAAACTAGGAGTGGCTAACCAAAGTATTACTGCTGGTTTTTTTGACAACAATACAAGTGCTGAAGATCGAAGGGAATATTTGGAATCTCTTCTACGCGAGTGTAAGAAAGAAGAAGCTGCACCTGTACTAGATGATGATGCTTTGAATGATCTCCTAGCACGCAGTGAGTCAGAGATTGATGTGTTTGAAACAATCGACAAAGAACGGCAAGAGCATGAGATGGCCACATGGAAGAAGGTGGTACTTGGTCATGGAATTTCTGAGCCTGTTCCTTCCATTCCTTCACGTCTTGTAACAGATGATGACCTGAAAGTATTCTATGAAGCAATGAAGATAAATGAAGAAGTACCAAAAGCTGGGGAGGTTTCCCATGTCGGGGTAAAGAGGAAGAGTGAATATCTTGGAAGCCTTGACACCCAACATTATGGGAGGGGGAAGCGGGCAAGAGAGGTGCGATCCTATGAGGAACAGTGGACGGAAGAGGAATTTGAAAAGATGTGCAAGGTCGACTCACCTGAATCCCCTAGGACAAAGGAAGCTGCGACAGGAGAACCATCGGCTAGTGTTAGTGGATCAGTTTTAGCAGCTGTTTTGAAGGCAGAAGTTCCTGATTCCTCTCCTCTGCCTCCTGCTCAGCCTTTGCCTCCTGTTCAGCCTATGCCTCCTGTTCAGCCTATTCCTCCTGTTCAGCCTATGCCTCAGCATCAAACGCCACCTTCGAAGCGAGGTCGTGGAAGACCCAAAAGATCAACTATTGATAAGTTGCCTGCTCCAGTGGTTCCTCCTCCATCTCTTTCTATAACAGCCAAAATGGAGACGGGGTTACAAGGGGAAACTGTTCCAAGCATTTCTAAAACTGGCTGTCTTGATTCTTTGCCTGGTCAAGGAATAACCGGTCAAATTGCTTCAGGGGCTGCTCCAAATTCTCAGTTAACTAGCCCAGTGCCTTGTAGTATTCCTGCCTCTGAATCAGCTCCAGCTTGCTCCCCTGCACCAATTCAAGCGAAAGGTCATGGTCGAAAAACTCAAACTGGACAAGAAGCTCCTCGGAGAAGGGGGAAAAAACAGGGAACAGTACTACCTCCCGTTCCTGGCAGTCTATCCTCTGATTTAAGACCAGATGACCTATCACAGGGTAAATTGACAAACCCAGTGGCAGGTCAAGTTAATGTTCCAAGCGACGTTGTTTCTAATGCTTCTGCGACCCAGCCTCCCACTTCTTTGCCTGGTTCTGCCCCTTCAAAAACTGTCACTGGACCTAACGATCAACCTGCCATTGGGGTTTCATCAAATTTGGAACCTAGTCCTGCTTTGCCTTCTGTGTCTTCTATATCTCAGTTGGCCCCTAATTTCATTCCTCAACCTGTACAGCCTAGAGGACCATATCGGAAGACTCAGAGTGCTGCTGGAGCACCACGACGTAGAGGAAAGAAACAGGCAGCAGCAACTCCTGCATTACCTAACACCATGGCTGGTGCTAGTCTAAGTTCAAATATGAATTTGCAAAAGAACCATATTGATTCTTCTTCAAGTAAGGCTGTTGTTGTCACTGCTACTAAAGAAAATATTGTCAATCAGGCGACCAATATTATCTCTGAGCAATTGCACCAGAAACCTGATGGAATCACTGGACAGGGTTTGGAATCTACTAAATCAACAGATAATTCCAATCAGGGCAAGGAGACAGTGAGCCTATCAACTTGTGTTAGGTCTACAGAACAAAATCAAAATACTGATTCACGTGGCATTTCTAATGTGAGCAAGGAGGCTTCTTCTGGAGATTGCACCGCCAAAGCAAACCCTTATGAGCACTTGAGTAAGAATACTGGTGCTGCCCAGGATGCAACTGTATCAAATAACAGTGTCGATGAGACTTTGAAGAGCCATAGTTTGCGGGAAACACCTCATCCAGTTACATCGACTTCAGAACCCGCAGTTCCAGTATGTGGTCCTCCAACTGTTTCTTTACCTAGTTCTGTTGCTGTGGAGATGAGTCCCAAAACTGTAGTAGATGTTGCTCCAGAGACTGCTCCTAGTTCCCAGCCAATCCAGTTATTACCATCAGTGGCTTCAACCTTGCAATTTGCCTCTCAATCTCCACCACCTGGACATCTGCAACCTAAACGAGGTCGTAGGAACCCAAAAAACAGGGAAGAGCCCCCTCGGCGTAGGGGAAGAAAACCAGCCTCATTGCCTTCTGTCATTCTGGATGGTTCAGCTAGCAAGGAAGCTAAAGATTTGAATTTGCAAGTGCAACCAGTGCAATTGGGGGATTCAAGTAGTAAAGACACATGCCTAAAAGGTAAAACTGGGACTGAGAATCAAGAACCAACCAGTGTTCAGAATGTCGCAAGTGCAACCCAAATTGTAGATACTGTGCATTCCTTGGGTCCAAAAAGAAAGGAGCAAGCACCCAAAACTGTCCAACACAAACAGTTGTTGGCATCATCAACAAAAATCGATGCTACTGGAGCCTTGGACAGGACCACTATATCAGGCCGTTATCAAACTGCAAACGTAAATGATGTTGCTCGAGTAATGAAGGAGGTCTTCTCTGGAACTGGCTTGTCAAAAGCTATAGTTGGAGAGTCTTCTGGGAAAGAAGGCAAGGATGCCCCTGCATTGCCTGTTTTGAGCAAGTCGTCTGTGGAGGTGATCAGAAGTAATCAATCAGAGGCTACTTTAGCTACAGTTTTAAATTCCAACATTCCAGTTGCGGCTCATGAATTAGAATCTTCAGTTCAAGCTAATGAAATAAGACCAGATTCTGCCAATTCTCCAGAAGAATGTACCATCCCGAAGATCGATGATGAAAATTCTGAAAGTACGAAGGCTGATGCGGTAAAGAAATTGGTTGAATCAAGAGAAGCGTCTGCTGCATGTGCAACTGTGGTTAGTGGCTCTCGAATTTCATCAAACTTCAACAATGCAGACCATAATCCCCCAGAAGGCTCACCTATTTCCTCAAGTCTGGGTGATTGCAATGCATCAAAGTCTCTTAAGGTGACTGATGATGTATTGAAAAACGAAACAAACCCTGTTAGTGGTGGACTCTTCAAATCTTGTCCTGATAGAAGCAGTGATGATGTTCCCTCATCTTTGAATAATGATGCCGAAAGTCGCCCTGCTCCTACATTGCCCGTCCCTTCTGATGGCAGTCATACAAATATAATAACTGCCCCTTGTACGACTCAGGAGAATAAGGGCTGTCAAAGTCTCTCGGGTCATCATGAAAATCTTGATCATTCAGGTGTTACAAGTTTTGATGAGAGCTCTGATGCACTCACGTCAGGTGCTGAACTTGATGTTCAAGGACGCCTTTCTGTATCTACCATGGATATTGAGAGTAAACATAATGACGTAAATGATATCGCTCCTGTTCTTGAACAAATGGATCCTGCCTCAAAGCAGGATGTTGACATTTTGCTGGGCAAGTCTAGTGGCAGTGTAGATCATTCTGACACAGGTGCACCTAATATGGTGAAGCATACATCGGGAAATAAATTTGAGCTTGCTTCAGAAGTGTTGCCAAATTTTCCTTCATCTGATGATGGAAGTGTTCAAGTCCAAGAAGTTTCTGCTGGAAGTCCTGATGATTCAGATATAGCTAAATCTGATAGAGGTTCTCTGGAGTTTGATCTGATACCTCCTAGAGTTGACGCTGCAGAATGCTCTTCCAAAATTGATGTTGAAGAACAGAAAGCACCGGAGTTAAATGGTAGTAGTAAGTGTATCTCGGAGGGGAATTTGAATGTACCAGAAAAAAAAGAAAAAATTGTGGAAGACAATGCTGTATTTGTTAAGCCTGAGGATGTTCCTGAGCCAATCGCTCTGATCCAGGAGAATGAAGATAACAAGGGTGACAACCATGGTGCATGTCTCATGGATATGGACATCTCCAAGAATGATGATCTAGATGAATCAGATGCTGGTAGACTAATACCTGCTGGTACTTCACCTTCAACATCAGAGAGAGAAAATGAATCTAAAAGCTCTGATGTAATTGTTGAAATAGACATTTCTGATGGAGAACGTGTGCCAGAAGATACAATGGCTAATATGGTTCCGCCATCATCTTCATTGCTGGGAGGGGAAGAAAATTGTTCTGTCACGTCTGTGGTAGATCAAGTTGATAGTTTAGGGAACCTGGAGGAACCCAAAAATATTGGAGTTAATGCTAATCTTCAAGTGATTGCGTCTCAGGATGTTGTTATGATTTCAGAAAACCTTGTGCAAGAAGATTCAAATGATACGTCCACTGCTCTACAGGAAGAAAAGATTGAGGGATCTGGTGAGATAAATCGAGGGTCTCCTAGTGAGAAGAGGCATTCTGATCCTCAAGTTGTGGACGTTCTTGTTGATCGTATTGAAGAAGATAAATCAGGGAATTTGGCCCAACCATTATCTTCCTCAGAAGTTAAGGAAACAAATATGATGATGTTGCCCACAATTTTAGATAATTCAGGTGATGAAACTGATTTACCTGTATCCTCATCCACGATGACAGGCAGAGAAAATATTGGGAATTCTTGCAAGGATGATTTGCGTGACTGCACAGTCACAGATTCAGTAAAAGCTCTCGAGGAAAGTAGACAATTACCAAAAGAGTTATCACAAGTTTCGGTTGTGCTTGCTTCATCCAACACGAATGATGACTCGTCTCAAATGGATCCCCTTAGCTCTCCAGACTCTCTGGAGGGACCAAGTGATTATCAAATGAGTAGTGACCATATAGTTGCAACACAGGATAACATTGTTTTGTCAGAAAATGCGTCATCTGTTTCATTAGTTACTGAGGAAAACAAGCAGCAAGGTTCCTCTGAGAAAACCTTATCTGATAGTGCAGAACCGTTGGAGGATTGCAAGGATTCTGATAATAGCAATAAAAAATTGGTCGTAACTCATGTCAACAAAGGAGAGGTTTTAAGCATCACTGAAAACCTCGTCTCCATTGATTCTTCCAATCATCTCATAGTTTCAAAGATGTTGGAAGTTTCTGCTGGTGATCAGATTAATGTTTCTCAAACTGGGGAGTCTGTACCCGTAGATGCAGTTGATACCTTAAACCAGCCCCCACCTTCAACAACCATGGAAGAAGAGAAGTCCGAAGCCTCATTTGATAGTGGTCTAATTGCTAGCCCACCGCCACTGAAAGACATTAAAGGTTTTCAGACTGAAACAGAGACTGAAACAGATCCAAAGGACTCTTCTCAACCTGATGGGATTTTAAAAGAAAATATATCAGGAGAAACAATTTTGCCTTCATCTTCTCTTGTGTTGGAGGAGGTAGGAGAAGCTATTATGCAATCTGGTGGTCAAGTTCAGACAATCGATCAAGCGGATACGTCTGAGGCAACAAACATTATTGGCCACCTGGCTGAAACTAAACTTAAAAAGAATCAAGAAACGGTTGTTGCAACAGAAGTGGGGGAGTCTTCTCTGGAGAAGGCTGTGACAGAAATAGCCAGTCCATCTTCTTTACCCGCAGAAAATGAAAGCTTGGAACACGCACCAGTTTCGAGTCCGGCTGATAGTGCCATTCCAGTTGCAGAAAGAGTCATATGTGATGAAGCTGATGTACTCACCGAAAATGAAAAGTGCCTACCGGAAAGTGGCTCATCAGTGCTTGATCTGGCTGATGGTCAAATGGCCATATGCAATGAAGCTGATGTTCCTCCAGTCAGTGACACGGTGCAGGGTCCGGCTGATAGTGTCACTTCAGTAGAAATGGCCATATGTGATCAAGTTGATGTTCCTCCAGTTTGCGGCTCGGCAAACGCTCCAGCTGATACCGCTGCCATATGTGATCAAGTTGATGCAACTCCTCCAGCTTCCGAGTTAGCACAAGATCCAGCTGATAGCGCTGTGGCATGTGATCAAGTTGATGTAACTCCTCCAGCTTCTGAGTTAGCTCAGGATCCAGCTGATAGCGCTGTGGTACACGATCAAGTTGATGTTTCTCCAGTCTGTGAGTCACTGCAAGAAAACAAGTCTCCAAATTTGCACCCGACTCCTGGATGCCCGGCAGTGGAGGATGAAACCGGTGAGCGGTCACCGGAGGAGACCCCAGTTAACAAGAGTTCAGTTGAATCAGAAACAGAGGATCCAAAGCAAAGTGAATGA 10416 43.66 MGQSNDSEINFHGLDNSSKICKRSIKWVDNVEYAHCLCARHVGMSRFIYRPNPTTKGAETRFISRAKRALTAISLTRAGGKHSSIVLSRARVVSVYYVFYMLQLYSVFVAILDKMASSQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMETVINQHGLDIEALRASRLPMTAGAQMGDSSTAQYAGSSSVVGAAKDSKMGISGSEMSKSGPLASSKPPVGPSSTDHDYYPGSATHRSGQSFDQESPSSLDSRSANSQSQEKHDSVNWDKQLNDKDSKKGSKKRKKVDTSVVEPSDNTHQLDTRNSLVNPRNVKTNRVEPPAYLVKGGNIEQAKHGLTKATEKPIDPQLYSVNRGDGTSTSNEKVLESELPMSSTSSVDATKMTQGTWRNTAPEMSMLRNPVSREAGKLPVSQVPTSSQPRLPFKEQQLKQLRAQCLVFLAFRNGLMPKKLHLEIALGNNFPKEEGLRKDVDPRGIAQSFNESRSSTEVMMPSGKLDAARETGMVAPGAMSAGRIFEADSMKDVDNRRVEDKKGTPSDYSVQAEVRKAEAEGMREKATSQTCLSSLSHPPDFSGARGVLTANNPVEDLENSNLQATAAVGMSKPLNPETVSWTGIGSTNEVSRGSIPAFASQHELVVDRKNDVSAQLHVVRNNSGLGSQHIDSQSSFSMGERWKPVSGTYDQYHAVMPSRDASVIPNLASHDDTHVPESESRCVTEVQKVASIDEGKNGSLNTLEQEDDAHLVHFLGYHFPLQDTVSSSEDISAKTRSVIELKKLQLLQLQRRLRNDFLTDFFKPISTEMDRLKSFKKHKHGRRIKQLEKFEQRMKEERQKRIRERQKEFFGEIEVHKERLDDVFKVKKERWKGFNKYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLQEAKSMASDMDDGGAVNVAEKSEAAIENEDESDQAKASGSLLTFLHQFLFHSLITLVFFSQHYLESNEKYYMMAHSVKESIAEQPSCLQGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQGNFQVISLICYLMETKNDRGPFLVVVPSSVLPGWESEINFWAPSVLKIVYSGPPEERRKLFKERIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMRRVEDNLGSIGSTKVDNLIPKHYLPPIVRLCGKLEMLDRILPKLKATDHRVLFFSTMTRLLDVMEEYLQWKQYRYLRLDGHTSGGDRGALIELFNRQDSPYFIFLLSIRAGGVGVNLQAADTVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRAAAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEAAPVLDDDALNDLLARSESEIDVFETIDKERQEHEMATWKKVVLGHGISEPVPSIPSRLVTDDDLKVFYEAMKINEEVPKAGEVSHVGVKRKSEYLGSLDTQHYGRGKRAREVRSYEEQWTEEEFEKMCKVDSPESPRTKEAATGEPSASVSGSVLAAVLKAEVPDSSPLPPAQPLPPVQPMPPVQPIPPVQPMPQHQTPPSKRGRGRPKRSTIDKLPAPVVPPPSLSITAKMETGLQGETVPSISKTGCLDSLPGQGITGQIASGAAPNSQLTSPVPCSIPASESAPACSPAPIQAKGHGRKTQTGQEAPRRRGKKQGTVLPPVPGSLSSDLRPDDLSQGKLTNPVAGQVNVPSDVVSNASATQPPTSLPGSAPSKTVTGPNDQPAIGVSSNLEPSPALPSVSSISQLAPNFIPQPVQPRGPYRKTQSAAGAPRRRGKKQAAATPALPNTMAGASLSSNMNLQKNHIDSSSSKAVVVTATKENIVNQATNIISEQLHQKPDGITGQGLESTKSTDNSNQGKETVSLSTCVRSTEQNQNTDSRGISNVSKEASSGDCTAKANPYEHLSKNTGAAQDATVSNNSVDETLKSHSLRETPHPVTSTSEPAVPVCGPPTVSLPSSVAVEMSPKTVVDVAPETAPSSQPIQLLPSVASTLQFASQSPPPGHLQPKRGRRNPKNREEPPRRRGRKPASLPSVILDGSASKEAKDLNLQVQPVQLGDSSSKDTCLKGKTGTENQEPTSVQNVASATQIVDTVHSLGPKRKEQAPKTVQHKQLLASSTKIDATGALDRTTISGRYQTANVNDVARVMKEVFSGTGLSKAIVGESSGKEGKDAPALPVLSKSSVEVIRSNQSEATLATVLNSNIPVAAHELESSVQANEIRPDSANSPEECTIPKIDDENSESTKADAVKKLVESREASAACATVVSGSRISSNFNNADHNPPEGSPISSSLGDCNASKSLKVTDDVLKNETNPVSGGLFKSCPDRSSDDVPSSLNNDAESRPAPTLPVPSDGSHTNIITAPCTTQENKGCQSLSGHHENLDHSGVTSFDESSDALTSGAELDVQGRLSVSTMDIESKHNDVNDIAPVLEQMDPASKQDVDILLGKSSGSVDHSDTGAPNMVKHTSGNKFELASEVLPNFPSSDDGSVQVQEVSAGSPDDSDIAKSDRGSLEFDLIPPRVDAAECSSKIDVEEQKAPELNGSSKCISEGNLNVPEKKEKIVEDNAVFVKPEDVPEPIALIQENEDNKGDNHGACLMDMDISKNDDLDESDAGRLIPAGTSPSTSERENESKSSDVIVEIDISDGERVPEDTMANMVPPSSSLLGGEENCSVTSVVDQVDSLGNLEEPKNIGVNANLQVIASQDVVMISENLVQEDSNDTSTALQEEKIEGSGEINRGSPSEKRHSDPQVVDVLVDRIEEDKSGNLAQPLSSSEVKETNMMMLPTILDNSGDETDLPVSSSTMTGRENIGNSCKDDLRDCTVTDSVKALEESRQLPKELSQVSVVLASSNTNDDSSQMDPLSSPDSLEGPSDYQMSSDHIVATQDNIVLSENASSVSLVTEENKQQGSSEKTLSDSAEPLEDCKDSDNSNKKLVVTHVNKGEVLSITENLVSIDSSNHLIVSKMLEVSAGDQINVSQTGESVPVDAVDTLNQPPPSTTMEEEKSEASFDSGLIASPPPLKDIKGFQTETETETDPKDSSQPDGILKENISGETILPSSSLVLEEVGEAIMQSGGQVQTIDQADTSEATNIIGHLAETKLKKNQETVVATEVGESSLEKAVTEIASPSSLPAENESLEHAPVSSPADSAIPVAERVICDEADVLTENEKCLPESGSSVLDLADGQMAICNEADVPPVSDTVQGPADSVTSVEMAICDQVDVPPVCGSANAPADTAAICDQVDATPPASELAQDPADSAVACDQVDVTPPASELAQDPADSAVVHDQVDVSPVCESLQENKSPNLHPTPGCPAVEDETGERSPEETPVNKSSVESETEDPKQSE 3471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 22749197 22780368 - Lsi05G014930.1 Lsi05g01493 663985

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2921 2938 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 1637 1666 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2435 2489 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 3105 3176 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 3255 3274 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2859 2877 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2978 3003 - -
Lsi05g01493 3471 PANTHER CHROMATIN STRUCTURE-REMODELING COMPLEX PROTEIN SYD 214 353 - -
Lsi05g01493 3471 PANTHER CHROMATIN STRUCTURE-REMODELING COMPLEX PROTEIN SYD 1216 2846 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2033 2056 - -
Lsi05g01493 3471 Coils Coil 941 961 - -
Lsi05g01493 3471 SMART QLQ_2 444 479 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 285 314 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2457 2471 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 3027 3057 - -
Lsi05g01493 3471 Pfam SNF2-related domain 1052 1221 IPR000330 GO:0005524|GO:0140658
Lsi05g01493 3471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1021 1241 IPR027417 -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2845 2877 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 1634 1696 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 3154 3170 - -
Lsi05g01493 3471 SMART helicmild6 1332 1405 IPR001650 -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 1587 1608 - -
Lsi05g01493 3471 Pfam Snf2-ATP coupling, chromatin remodelling complex 1499 1595 IPR029295 GO:0042393
Lsi05g01493 3471 Gene3D - 1016 1266 IPR038718 -
Lsi05g01493 3471 PANTHER SNF2/RAD54 HELICASE FAMILY 214 353 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 369 403 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2346 2374 - -
Lsi05g01493 3471 Gene3D - 1287 1495 IPR027417 -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 1966 2079 - -
Lsi05g01493 3471 PANTHER SNF2/RAD54 HELICASE FAMILY 426 1215 - -
Lsi05g01493 3471 PANTHER SNF2/RAD54 HELICASE FAMILY 1216 2846 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 1587 1621 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2401 2423 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 225 284 - -
Lsi05g01493 3471 CDD SF2_C_SNF 1294 1415 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2732 2763 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 1802 1883 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2143 2157 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 219 338 - -
Lsi05g01493 3471 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1306 1483 IPR001650 -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2609 2636 - -
Lsi05g01493 3471 PANTHER CHROMATIN STRUCTURE-REMODELING COMPLEX PROTEIN SYD 426 1215 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 3423 3471 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2610 2626 - -
Lsi05g01493 3471 ProSiteProfiles HSA domain profile. 845 919 IPR014012 -
Lsi05g01493 3471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1174 1448 IPR027417 -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 1725 1940 - -
Lsi05g01493 3471 Coils Coil 1448 1468 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 3105 3130 - -
Lsi05g01493 3471 Coils Coil 840 860 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2125 2165 - -
Lsi05g01493 3471 SMART ultradead3 1044 1245 IPR014001 -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 374 403 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 1920 1940 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 1725 1750 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 3027 3043 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2181 2209 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 1966 2025 - -
Lsi05g01493 3471 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1060 1231 IPR014001 -
Lsi05g01493 3471 SMART SnAC_2 1498 1595 IPR029295 GO:0042393
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 315 335 - -
Lsi05g01493 3471 MobiDBLite consensus disorder prediction 2915 2944 - -
Lsi05g01493 3471 Pfam Helicase conserved C-terminal domain 1303 1393 IPR001650 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi05g01493 - - - csv:101206586 5081.92
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi05g01493 Lsi-Chr5:22749197 Lsi09g01338 Lsi-Chr9:21319700 2.20E-146 dispersed
Lsi05g01493 Lsi-Chr5:22749197 Lsi03g01728 Lsi-Chr3:28649534 2.65E-28 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g371 . . . . . Bpe14g01153 . . . . Cma06g01457 Cma14g01649 Car06g01259 Car14g01483 Sed02g1676 Cpe08g00220 Cpe03g01393 Bhi01g00925 Tan10g0941 Cmetu06g0809 . Hepe05g1489 . Lcy11g1461 . . . . . . . Cone14ag0789 Cone15ag0790 . . Lsi05g01493 . . Cme06g00682 Blo02g00553 . . . . . Bma02g00714 . . Cmo06g01459 Cmo14g01693 . . . . . . . . . . . . . Cla05g00609 Cam05g0669 Cec05g0679 Cco05g0673 Clacu05g0664 Cmu05g0632 Cre05g0702 . Csa03g01407 Chy06g00650 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006639 1 1 1 1 1 1 2 1 1 1 1 1 3 1 1 2 1 2 2 1 1 1 1 0 2 1 0 2 1 1 36
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
25378 PF00176 SNF2_N 1.40E-38 CL0023 Lsi TR