Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi05g01889 ATGAGGCTCAGATCCACAGTAGTTTCGGCAAATCCTCCATTTTCTCAGCTTCCAAACAGCGCCAGCGGAACCCTTCCACTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCCCCTTTCTCTCTCCGCCATGTTCCGACGAGCTTCCAGCCTTTTGGCCCGCCCTTTTCTCTCTGCAAGGACAAGATCCTTCTCCACCGATCTGCCGGCCGCCTCTTCCACCGACGATGCCTTTGTCTCCGCCTGGAAGAAGGTGATCCCCAATATTGACCCTCCTAAAACTCCTCTATCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAGCTCACTGTCAACTTCGTCCTTCCCTATGCCTCCGAACTCTCTGCCAAAGAGGTTGACATGGTCATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCAACAATCGCAGAGTTGAAGCCAGGGGTTTTATCAGTACACGAAGGGACTGACATCAAAAAATACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCGTATGCTGACATAATCGCTGTCGAAGCTGTGCCTGTAGATCAAATCGATGCCAGCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCGACAGACTTGGAGAAAGCCGAAGCCCAAATTGGAGTCGACGTGCACAGTGCCCTGAATTCTGCCCTTACAGGATAG 750 51.47 MRLRSTVVSANPPFSQLPNSASGTLPLLLLLLHLSPTLREPSDPLSLSAMFRRASSLLARPFLSARTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26046406 26049209 - Lsi05G018890.1 Lsi05g01889 664381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi05g01889 249 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 119 190 IPR020546 GO:0015986
Lsi05g01889 249 Gene3D - 206 248 - -
Lsi05g01889 249 Coils Coil 214 234 - -
Lsi05g01889 249 Hamap ATP synthase epsilon chain [atpC]. 117 237 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lsi05g01889 249 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 119 200 IPR036771 -
Lsi05g01889 249 CDD F1-ATPase_delta 119 242 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lsi05g01889 249 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 50 249 - -
Lsi05g01889 249 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 50 249 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lsi05g01889 249 Gene3D - 107 205 IPR036771 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi05g01889 K02134 - csv:101206104 371.318