Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi05g01907 ATGGAGCAGCAATATCCACATGGAAGGGGAGCCGATGCAGTTTTACATCTTCAGCCAAATTCCTCAATTTCTATTGCATATCACTCACTCTTTGGTCCACATGATGATTTGGTTCTTCTTGAGGTCGATGAAAAGCTTCTGGAAGAAGTCCTCCACCAACGAGCAAGCATCAGAGGACAGCCAGAAGAAGATGCAGTCTTTTGTACAAAGTCGAAAACTTATGGAATCAAATATGTGGGAACTTCCAATTCTGTACTTCTCATACCTCCATCTGGTCGATCAGAATACTATGAAAATGAGCTAGATAGCCATCAGAAGGATAGCTCTAAAGAAGTTGCACCTGTGATTAAAGTAGCTCCAGGTATCATGGAACTTCATGAGATTGCTCCCAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGGAACCTTACAGCTTAGCTGATGAGTGGGAAAGGGAAGAGGTGGACAAATATGAAAAGCGAATGTATAATTGGGATGATCTTATAAACAAGGTTCAAGCTAGCGACGATGAACTGAAAGCTGGATTACAAGCACTTTCAGCGGCTGAGATTGATGGGTACTGGAGAGTTGTGGATGAAAAATACATTGACTCCATGCTACAGATGCTTTTGCATAACACGATTTTAAATGACTGGTCTCTGGATGCACTTGATGAAGGTGTAATCATGAAAGTGATGAAAATGGATGGTTTTCCTGAAAAACTTGTGCATCACTGTCTCCTTGTTTATGGTGATAATTTGGATGGAGATGAGGGGCAAAGTTGTTTATGGAGATTAGACGAGAAACGGGTTTGTGTGCATTTTGCTAGAGAAATCTTGAGGAAAGGAAAGATGAAGGTAGAGCATTTCATGGATGAATGGAGGCGGAAAATCCCACTAGGAATGCATGCCAACTTCGACCTGTTGGAAGGTGAAGTTCTGACTGAGAGACTTGGTGTTGAGACATGGGTTCGTGGTTTCAGAGTTTGTTCATTGCCATCGAATCCTGCCGAGCGTTTCAGCATTTTGTTTAGAGAGCGACCAAAATGGGAGTGGAAAGATTTGCAGCCCTACATCAGGGATCTTACAGTTCCAGGCCTTTCATCAGAAGGTTTGCTTCTCAAATACACCCGAAGAACTCAACCGAACCCTGAAGCAGAAGCTGTATTCAGTGCAAGATAG 1182 42.55 MEQQYPHGRGADAVLHLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRASIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYENELDSHQKDSSKEVAPVIKVAPGIMELHEIAPRIDKLKLLLSEEPYSLADEWEREEVDKYEKRMYNWDDLINKVQASDDELKAGLQALSAAEIDGYWRVVDEKYIDSMLQMLLHNTILNDWSLDALDEGVIMKVMKMDGFPEKLVHHCLLVYGDNLDGDEGQSCLWRLDEKRVCVHFAREILRKGKMKVEHFMDEWRRKIPLGMHANFDLLEGEVLTERLGVETWVRGFRVCSLPSNPAERFSILFRERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26217067 26219752 + Lsi05G019070.1 Lsi05g01907 664399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi05g01907 393 Pfam Sister chromatid cohesion protein Dcc1 38 359 IPR019128 GO:0007064|GO:0031390
Lsi05g01907 393 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 11 393 IPR019128 GO:0007064|GO:0031390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi05g01907 K11271 - csv:101203202 727.243