Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi05g02052 ATGTCACAAACAGATGATTTCGAGACATTCACTCCAACGACTGATGTCGAGCCTCTAAAGAGGGCCTGGTGTAATGAAAAGGCTGCTCCTGAAATTCTACCCTTTGAGGCATCTTTGGTTGGGAGAATCAAAGAGCAAATTCAATCGATGGAAGATACTATAGAGGAATATTCAAGAAGTGGCATCGATCCCCTGATTGTATCACTCTATCAAATGGATTTAGATAGGACACAGTTCTTGTTGAGATCATATATTAGGAGTCGCTTGCAGAAGGTACAACCTGAATATTGTTTAATTTTGTTCAGAAACATCGAGATGCGCATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCTAAAGAAGAGATAACATTTACTGATAGGTGTCGTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAGGCAATCTATAACAAGTGAAGAGGATGACATGGTTCCAGAACCTCCACTGGACACGTTTGTGGTTTGCAAAAGTAAGGAATATCTTGAGCATATACAGCTTGAGGATGAGGAAGAGAGAGCGTCTAGTAGAATAGAGGAGCCTTTTGAGATGGAGGCCAATGTATTGCACATTATTCGCTACAGGCCCATAAAATCACTTGTAGAGAGCGGGAGAATTGATTTGCTATAG 711 39.24 MSQTDDFETFTPTTDVEPLKRAWCNEKAAPEILPFEASLVGRIKEQIQSMEDTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRSRLQKVQPEYCLILFRNIEMRIEKYMLYILKSDELFRRLSKEEITFTDRCRHDMKKHFDESVLSKLPNNYQDILRQSITSEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 236
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 27469151 27473392 + Lsi05G020520.1 Lsi05g02052 664544
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lsi05g02052 236 SUPERFAMILY GINS helical bundle-like 11 161 IPR036224 -
Lsi05g02052 236 CDD GINS_A_Sld5 15 149 IPR038749 -
Lsi05g02052 236 SUPERFAMILY PriA/YqbF domain 177 236 - -
Lsi05g02052 236 Pfam DNA replication complex GINS protein SLD5 C-terminus 175 236 IPR031633 -
Lsi05g02052 236 Gene3D - 2 226 - -
Lsi05g02052 236 PANTHER SLD5 PROTEIN 1 236 IPR008591 GO:0006261
Lsi05g02052 236 Coils Coil 40 60 - -
Lsi05g02052 236 PIRSF GINS_Sld5 1 236 IPR008591 GO:0006261
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi05g02052 K10735 - csv:101210888 407.142