Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi06g00089 AACACCAAGAATCCCGTAGTCCAGCCCGTACCAGATCCCATCCTATCTTCCCCTCCCCAGAAACAAACTCCATACAGAACCCGAAGAAAAACCAGAAAGCAGAGAAGAGAAGAAGAAGAAGAAGAAGAAAAACAGCAGAAAACAGAGAACAATGATGGATCGGGTCGGGAAATTTGGGTCGGGTCAGATTCAAACGCTCTCCAAATCCGCCCACCACCCTCTCCTCCGTCTCCGCCTCCTCTTCCTCTTCGTCCCAACATAGACCCATTTCTCAATTCTTCCATTTCTCTATTCTTTTCGGTTTTATTTCTTCAAAATCCCCAAATGCCTTCACCATTTCTCAACTTACCCGACGAGATCCTCATCCGGGTCCGCCAAAATCTCACCCATCACTCCGATTCCAAGTCCTGGCGACTTCTTTGCAAGGATTTCCACCGCATCGATTTAATCTCCCGTAAAACTCTTCGTGTCCGTCGAATTGAGTTTCTCTTGAGCTTAATCTCTAAATTTAAAAACATAGATGAATTGGATCTCTCGATTTGCTCACGGATCAACGACGGGACGGTGTCCATCTTTGTGGGTTTTGCGTCTTCGAGGCTGAGGAGTTTGATTCTGAGGCGATCGGCGGGGTTAAGCTACTTGGGGTTGGAGAGAATGATGAGGGCTTGCACAGGGTTGCAAATGGTCGACATGTCGTACAGTTGGAGGTTTGGGGATAGAGAAGCGGCGGCAGTGTCGAATTGTGAGGGGTTGAAGGAAGTGAGGTTGGATAAGTGTTTGGGGGTTACAGATGTGGGTTTAGCGAGGATTGTTGTTGGGTGTGGGAGGTTGGAGAAGCTAAGCTTGAAGTGGTGTTTGCAGGTTACTGATCTTGGTGTTGAGCTTTTGTGTAAGAAGTGCTTCCATTTGAAGCTTCTTGATCTCTCTTATCTCAAGGTGACAAATGAATCACTACGTTCAATATCTTCTTTGCCAAAGCTTGAGATTTTGGTTATGATGGGCTGTCTTTCAGTTGATGATGTTGGTTTGCAGTATCTTGAACATGGCTGCCCTTTTCTGAAGGAACTTGATATTTCAAGATGTGATGGCATTAGTTCGTATGGCTTAACATCCATTTTAAGAGGTCACGATGGTCTTGAGCAGCTTGATGCAGGCTACTGCTTCTCTGAGCTTTCCGCAGACTCTATTTACAGGCTGAAGAACCTGAAATGTCTAAAAGCAATTAGGCTTGACGGTACTCAACTATCAAGCACGTTTTTCAATGCAATCAGCGTCCACTGCGAGTATTTGGTGGAACTAGGGTTGAGTAAATGCAAGGGAGTGACTGATGCAAACATCATTCAGCTGATCTCTCGCTGTATTAGCTTGAAAGTTCTCAATTTAACATGTTGCAACTCCCTCACCGATGTGGCAATATCTAAAACGGCAAGCTCTTGCCGGAAACTTATGTCGCTGAAGTTAGAATCATGCAACATGATCACTGAAAGAAGTCTCAATCAGCTTGGATTGTACTGCTCCTCACTAGAGGAGCTTGATCTTACTGATTGTTGTGGTGTGAATGACAAGGGACTTGAATGCTTATCAAGATGTTCACAATTATTATGCTTGAAACTAGGATTATGCACAAACATAACAGACAAAGGGTTGAGCAAGATTGGTCTCAACTGCAAAGGGCTTAATGAACTTGATTTGTACCGTTGTCTGGGTATTGGGGATGCCGGATTAGAAGCTTTATCAAGTGGTTGCAAGAAATTGATGAAACTGAACTTATCATACTGTAATAAGCTTACGGATAGAGGGATGGAGTACATCGGCCACCTCGAGGAACTCTGCAACTTAGAAATACGTGGGCTTCATAATGTCACAAGTGTTGGTTTGACAGCAGTTGCCGCTGGTTGTAAAAGATTAGTAGATTTGGATATGAAACAATGCCAGAATGTCGATGATTCTGGCTTTTGGGCACTTGCATCTTACGCTCATAATTTGCGACAGATTTACCGCTTGTTTTGGGGAATTTATTTATTTATTTGGATAGGAAACTATTTCATTGATGTTATGAAATTAGGCAAAGAGCATTCTCAAAGAGAGTATGTTATGTCATTTGTATTGGCTTCTCGAAATGAGATCAAGCACTACCTGAGTTATTCTGTTTTATTGTGGCAGTTAAATGTGGGCTCTTGTGCTGTCTCGGATGTGGGATTATGCATGATGATGGGGAACCTTACATGCCTTCAGGATGCTAAGCTCGTAAACCTAAACAAAGTCTCGGTACGAGGTTTCGAGCTTGCACTTAGAACCTGTTGCCTCCGGATCAAGAAAGTCAAATTGCACGCATCTCTCAGGTTTATGCTCTCCTCAGAGATACTCGAAATTCTGAATGCTTGGGTCATGTTAAGAGTTTCTTTAGCCATTCATCTTTTTATGTTGATCTTTATTCCTGCATTACAAGTTTCCTGCATTAATGTTATCTACCCAAATGAGCAAAATAATGGTATACAATCGATGATTTCTCAGATTTGTGCAGATATCGAAGATCGAAATTCATGCATTTCGAACATACAACTTGAGATGGGAAGAAGTGTGAACTCAAATCCAAGTTCTGTCTTGAGTGCTGCAATTAGAGCAACCCTTAATGAAGCTAGACGAGCCATAGAGTCTATAACAAAGTTCAGCACATTCTCATTTAGCTACCGTGAAGAAATGGCGATCGAGGACTGCAAGGAGCTTCTTGATTTCTCTGTGTCAGAGCTTGCCTGGTCTTTAGCTGAGATGAAAAGGATCCGTGCAGGCAAAAACGAAGCTCCCGATGAAGGGAATCTAAAAGCATGGTTGAGCGCTGCTCTCAGCAACCAAGATACGTGCCTTGAAGGCTTTGAAGGCACAGACAGGCATATTGTAGGTTTCGTTAGAGGTAGTTTGAAGCAAGTTACACTGCTTATTAGCAATGTCTTGGCATTGTACACTCAATTACACAGCTTACCATTTCAACCCCCACGGAATGAAACGATAGAGAAAACCAAAAGTTCAGAGTTTCCAGATTGGATGATGGATAGCGAGCACAAGCTCGTGAAATCTCATCCACGTACCGTCCACGTTGATGCAGTCGTGGCTTTGGATGGAAGCGGAGATTTCCGTTCTATCACAGAAGCTGTAAATGAAGCTCCAAATTATAGTAATAGAAGGTACATCATATATGTGAAGAAGGGAGTCTACAAAGAAAATATCAACATGAAGCGAAAGAAAACCAACATAATGTTTATTGGAGATGGTATCGGAGAAACAATAGTGACGGGAAATCGCAATTTTCTGCAGGGATGGACTACTTTCAGAACTGCAACTGTTGCTGTCTCTGGGAAGGGATTCATAGCAAGAGACATGACATTTCGCAACACGGCTGGACCAGAAAACCATCAGGCGGTGGCACTCCGAGTCGACTCCGATCAATCAGCCTTCTTTCGGTGCAGCTTTGAAGGCCATCAAGACACGCTTTACGTCCACTCCCTACGCCAATTTTACAGGGAATGCAATATATATGGCACCATTGACTACATTTTCGGCAACGGGGCAGCAGTATTCCAAAAATGCAACATTTACACCAGAGTTCCGCTCCCACTCCAGAAGGTCACGATCACGGCCCAAGGTCGAAAATCCCCGCACCAGAGTACGGGTTTTTCAATCCAAGACAGCTTTATTTATGCAACTCAGCCAACATATCTTGGAAGACCATGGAAGTTATATTCAAGGACTGTCTTCTTGAACACTTACATGAGTGGTTTGGTACAACCTAGAGGATGGCTTGAGTGGTATGGCAATTTTGCTTTAGGCACATTGTGGTATGGAGAGTATAAAAACTATGGACCTGGTGCCTCCCTTTCAGGTCGGGTCAAATGGCCTGGGTACCACGTTGTCCGAGACCCTGCCGTGGCTAGGTTCTTTACTTCCGAGCACTTCATCGATGGTCGATCATGGTTGCCAAAGACGGGTATTAAGTTCACATTGGGATTAAGTAACAATCAAGACAAAATGAGTTATAGTGATGATGATTCTCAAAACAAAAAAAGATATGCCATCATCGGTGTCTCGTCCATGTTACTAGTGGCGATGGTGGTGGCGGTGACGGTTGGCGTTAACCTAAACCAAGATGAAACGAGCGATCCGGCGACCGGAAACAAATCTCATGAAATATCTTCTTCTGTGAAAGCCATTAAAGCTATTTGTCAACCTACTGATTACAAACAAGAATGTGTTGCTAGTCTCAAGGCTACTAGTAACAACTCTTCAGATCCAAAGGAATTGGTTCAAGCTGGCTTCAAGGCTGCCATGAAGTTGATCCAAGCTGCTGCTAATAAATCTGTCACCTTGAAAGAGCTTGAGAAAGACCCTAGAACATCCAAAGCCCTTGCTGGTTGTAAAGAGCTTATGGATTTTGCCGTTGGCGAGCTTAAATACTCAATGAACAAGCTTGGCGAGTTTGATATTAGTAAACTCGATGAGATGTTGATTGATATTAAGATTTGGCTCAGCGCTACCATTACTTATCAGGAAACTTGCTTGGATGGATTTGAGAACACAACTGGAAATGCGGCAGAGAAGATGAAGAAGGCATTGAAGACATCGATGCGGTTGAGCAGCAATGGGTTGGCAATGGTGTCGCAAATCTCGTCCATGTTGACAGAGTTGCAGATTCCGGGTATCAGCCGAAGGCGACTTCTCGAGATTGACATTCCGGTTCTTGGACATGACGATTATCCCGACTGGGCTAACCCCGGGATGCGACGACTTCTAGCTGTCGGGTCGAAAGTGAAGCCAAATGTTGTGGTGGCCAAGGATGGAAGTGGTCAATTCAAGACCATTCAAGAGGCTCTAGACAAAGTTCCAAAGAGAAAGAACAATGCAACTTTTGTAATTCATATCAAGGAAGGAGTGTATAAGGAATATCTTATGATTAAAAAAACTCTCACCCATTTGATGCTCATTGGTGATGGCCCCAAAAAGACCATTATCAGTGGAAGCAATAACTTTATTGATGGCACACCCACTTTCAAAACTGCAACTGTGGCTGTGACAGCAGAGCACTTTATGGCAAGAGACATCGGGTTCGAGAACACGGCAGGGCCACATAAGCACCAAGCAGTTGCATTACGAGTCCAAGCAGACAAAGCTGTATTCTACAACTGCGAAATGCATGGTTACCAAGATACTCTCTATGTCCACACCATGCGTCAATTCTACCGTGACTGCACCATCTCCGGCACCATCGACTTCGTCTTCGGTGACGCAGCGGCCATCTTCCAAAGTTGCACCTTCTTAGTCCGCAAGCCCCTTCCAAACCAACAATGCATCGTAACAGCACATGGACGCAAAGAACGCCGCCAACCGTCAGCCCTCATCATGCAAAACTGCTTCTTCAAGGCCGATGCTGACCTCGCCCCGGTGCAAAAGCAGTTTCGATCATTCCTCGGCCGACCGTGGAAGGAATATTCAAGAACAATCATCATGGAATCATACATTGGTGATTTAATTCAACCAGAAGGGTGGTTGCCATGGGCTGGAGATTGGGGTTTGAAGACATGTTTTTACACCGAGTTTAACAATTATGGGCCAGGATCTGATAAGTCAAAGAGGGTGAAATGGAGAGGGATTAAGACCATTACGCCACAACATGCTTTGGATTTTACTGCCGGAAGGTTTGTTATGGGGGATAGATGGATTAAGCCCACCGGAGTTCCATATGTCTCTGGCTTGACCAGGACCGGTGGCGCGGCTGCAAAGGGCGGAGTTGCTCATTGA 5790 44.39 NTKNPVVQPVPDPILSSPPQKQTPYRTRRKTRKQRREEEEEEEKQQKTENNDGSGREIWVGSDSNALQIRPPPSPPSPPPLPLRPNIDPFLNSSISLFFSVLFLQNPQMPSPFLNLPDEILIRVRQNLTHHSDSKSWRLLCKDFHRIDLISRKTLRVRRIEFLLSLISKFKNIDELDLSICSRINDGTVSIFVGFASSRLRSLILRRSAGLSYLGLERMMRACTGLQMVDMSYSWRFGDREAAAVSNCEGLKEVRLDKCLGVTDVGLARIVVGCGRLEKLSLKWCLQVTDLGVELLCKKCFHLKLLDLSYLKVTNESLRSISSLPKLEILVMMGCLSVDDVGLQYLEHGCPFLKELDISRCDGISSYGLTSILRGHDGLEQLDAGYCFSELSADSIYRLKNLKCLKAIRLDGTQLSSTFFNAISVHCEYLVELGLSKCKGVTDANIIQLISRCISLKVLNLTCCNSLTDVAISKTASSCRKLMSLKLESCNMITERSLNQLGLYCSSLEELDLTDCCGVNDKGLECLSRCSQLLCLKLGLCTNITDKGLSKIGLNCKGLNELDLYRCLGIGDAGLEALSSGCKKLMKLNLSYCNKLTDRGMEYIGHLEELCNLEIRGLHNVTSVGLTAVAAGCKRLVDLDMKQCQNVDDSGFWALASYAHNLRQIYRLFWGIYLFIWIGNYFIDVMKLGKEHSQREYVMSFVLASRNEIKHYLSYSVLLWQLNVGSCAVSDVGLCMMMGNLTCLQDAKLVNLNKVSVRGFELALRTCCLRIKKVKLHASLRFMLSSEILEILNAWVMLRVSLAIHLFMLIFIPALQVSCINVIYPNEQNNGIQSMISQICADIEDRNSCISNIQLEMGRSVNSNPSSVLSAAIRATLNEARRAIESITKFSTFSFSYREEMAIEDCKELLDFSVSELAWSLAEMKRIRAGKNEAPDEGNLKAWLSAALSNQDTCLEGFEGTDRHIVGFVRGSLKQVTLLISNVLALYTQLHSLPFQPPRNETIEKTKSSEFPDWMMDSEHKLVKSHPRTVHVDAVVALDGSGDFRSITEAVNEAPNYSNRRYIIYVKKGVYKENINMKRKKTNIMFIGDGIGETIVTGNRNFLQGWTTFRTATVAVSGKGFIARDMTFRNTAGPENHQAVALRVDSDQSAFFRCSFEGHQDTLYVHSLRQFYRECNIYGTIDYIFGNGAAVFQKCNIYTRVPLPLQKVTITAQGRKSPHQSTGFSIQDSFIYATQPTYLGRPWKLYSRTVFLNTYMSGLVQPRGWLEWYGNFALGTLWYGEYKNYGPGASLSGRVKWPGYHVVRDPAVARFFTSEHFIDGRSWLPKTGIKFTLGLSNNQDKMSYSDDDSQNKKRYAIIGVSSMLLVAMVVAVTVGVNLNQDETSDPATGNKSHEISSSVKAIKAICQPTDYKQECVASLKATSNNSSDPKELVQAGFKAAMKLIQAAANKSVTLKELEKDPRTSKALAGCKELMDFAVGELKYSMNKLGEFDISKLDEMLIDIKIWLSATITYQETCLDGFENTTGNAAEKMKKALKTSMRLSSNGLAMVSQISSMLTELQIPGISRRRLLEIDIPVLGHDDYPDWANPGMRRLLAVGSKVKPNVVVAKDGSGQFKTIQEALDKVPKRKNNATFVIHIKEGVYKEYLMIKKTLTHLMLIGDGPKKTIISGSNNFIDGTPTFKTATVAVTAEHFMARDIGFENTAGPHKHQAVALRVQADKAVFYNCEMHGYQDTLYVHTMRQFYRDCTISGTIDFVFGDAAAIFQSCTFLVRKPLPNQQCIVTAHGRKERRQPSALIMQNCFFKADADLAPVQKQFRSFLGRPWKEYSRTIIMESYIGDLIQPEGWLPWAGDWGLKTCFYTEFNNYGPGSDKSKRVKWRGIKTITPQHALDFTAGRFVMGDRWIKPTGVPYVSGLTRTGGAAAKGGVAH 1929
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 897490 909628 + Lsi06G000890.1 Lsi06g00089 664819

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi06g00089 1929 Pfam Leucine Rich repeat 350 372 IPR001611 GO:0005515
Lsi06g00089 1929 Pfam Leucine Rich repeat 504 528 IPR001611 GO:0005515
Lsi06g00089 1929 Pfam Leucine Rich repeat 453 473 IPR001611 GO:0005515
Lsi06g00089 1929 Pfam Leucine Rich repeat 299 322 IPR001611 GO:0005515
Lsi06g00089 1929 Pfam Leucine Rich repeat 582 604 IPR001611 GO:0005515
Lsi06g00089 1929 SMART LRR_CC_2 350 375 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 556 581 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 274 299 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 633 658 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 453 478 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 582 607 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 248 273 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 531 555 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 608 632 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 479 504 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 325 349 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 170 195 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 300 324 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 427 452 IPR006553 -
Lsi06g00089 1929 SMART LRR_CC_2 505 530 IPR006553 -
Lsi06g00089 1929 Pfam Pectinesterase 1033 1320 IPR000070 GO:0030599|GO:0042545
Lsi06g00089 1929 Pfam Pectinesterase 1604 1901 IPR000070 GO:0030599|GO:0042545
Lsi06g00089 1929 ProSitePatterns Pectinesterase signature 1. 1630 1649 IPR018040 -
Lsi06g00089 1929 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1400 1554 IPR035513 -
Lsi06g00089 1929 MobiDBLite consensus disorder prediction 32 51 - -
Lsi06g00089 1929 ProSitePatterns Pectinesterase signature 2. 1749 1758 IPR033131 -
Lsi06g00089 1929 Coils Coil 28 51 - -
Lsi06g00089 1929 Gene3D Invertase/pectin methylesterase inhibitor family protein 1397 1554 IPR035513 -
Lsi06g00089 1929 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 834 991 IPR035513 -
Lsi06g00089 1929 ProSitePatterns Pectinesterase signature 1. 1058 1077 IPR018040 -
Lsi06g00089 1929 TIGRFAM PME_inhib: pectinesterase inhibitor domain 802 991 IPR006501 GO:0004857
Lsi06g00089 1929 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1398 1553 IPR006501 GO:0004857
Lsi06g00089 1929 PANTHER PECTINESTERASE 805 1334 - -
Lsi06g00089 1929 PANTHER PECTINESTERASE 1383 1914 - -
Lsi06g00089 1929 Gene3D Invertase/pectin methylesterase inhibitor family protein 832 991 IPR035513 -
Lsi06g00089 1929 SUPERFAMILY RNI-like 161 403 - -
Lsi06g00089 1929 CDD PMEI-like_3 1404 1555 - -
Lsi06g00089 1929 Pfam Plant invertase/pectin methylesterase inhibitor 1401 1549 IPR006501 GO:0004857
Lsi06g00089 1929 Pfam Plant invertase/pectin methylesterase inhibitor 835 986 IPR006501 GO:0004857
Lsi06g00089 1929 Gene3D Ribonuclease Inhibitor 110 300 IPR032675 -
Lsi06g00089 1929 Gene3D Ribonuclease Inhibitor 393 501 IPR032675 -
Lsi06g00089 1929 SUPERFAMILY Pectin lyase-like 1600 1914 IPR011050 -
Lsi06g00089 1929 SMART PMEI_2 1397 1549 IPR006501 GO:0004857
Lsi06g00089 1929 SMART PMEI_2 831 986 IPR006501 GO:0004857
Lsi06g00089 1929 CDD PMEI-like_3 839 992 - -
Lsi06g00089 1929 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED 805 1334 - -
Lsi06g00089 1929 MobiDBLite consensus disorder prediction 1 60 - -
Lsi06g00089 1929 SUPERFAMILY L domain-like 555 754 - -
Lsi06g00089 1929 Gene3D Ribonuclease Inhibitor 301 392 IPR032675 -
Lsi06g00089 1929 SUPERFAMILY Pectin lyase-like 1030 1334 IPR011050 -
Lsi06g00089 1929 ProSitePatterns Pectinesterase signature 2. 1177 1186 IPR033131 -
Lsi06g00089 1929 Gene3D Ribonuclease Inhibitor 504 794 IPR032675 -
Lsi06g00089 1929 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED 1383 1914 - -
Lsi06g00089 1929 Gene3D - 1028 1335 IPR012334 -
Lsi06g00089 1929 Gene3D - 1597 1915 IPR012334 -
Lsi06g00089 1929 SUPERFAMILY RNI-like 340 599 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi06g00089 K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] - csv:101207393 1078.93
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi05g00099 Lsi-Chr5:1736313 Lsi06g00089 Lsi-Chr6:897490 9.09E-107 dispersed
Lsi06g00089 Lsi-Chr6:897490 Lsi09g01450 Lsi-Chr9:22477690 6.61E-111 dispersed
Lsi09g01373 Lsi-Chr9:21744192 Lsi06g00089 Lsi-Chr6:897490 2.33E-17 dispersed
Lsi11g00323 Lsi-Chr11:3331676 Lsi06g00089 Lsi-Chr6:897490 2.40E-21 dispersed
Lsi01g00355 Lsi-Chr1:3163683 Lsi06g00089 Lsi-Chr6:897490 1.60E-07 transposed
Lsi02g02352 Lsi-Chr2:30198617 Lsi06g00089 Lsi-Chr6:897490 4.19E-08 transposed
Lsi02g02678 Lsi-Chr2:33248375 Lsi06g00089 Lsi-Chr6:897490 3.73E-21 transposed
Lsi02g02681 Lsi-Chr2:33281732 Lsi06g00089 Lsi-Chr6:897490 3.86E-07 transposed
Lsi02g02691 Lsi-Chr2:33314583 Lsi06g00089 Lsi-Chr6:897490 2.01E-07 transposed
Lsi03g02254 Lsi-Chr3:33494688 Lsi06g00089 Lsi-Chr6:897490 7.19E-37 transposed
Lsi04g01522 Lsi-Chr4:22852237 Lsi06g00089 Lsi-Chr6:897490 1.07E-06 transposed
Lsi05g00458 Lsi-Chr5:5871743 Lsi06g00089 Lsi-Chr6:897490 2.66E-14 transposed
Lsi07g01030 Lsi-Chr7:15624554 Lsi06g00089 Lsi-Chr6:897490 6.51E-119 transposed
Lsi08g00510 Lsi-Chr8:13020976 Lsi06g00089 Lsi-Chr6:897490 8.62E-08 transposed
Lsi09g01149 Lsi-Chr9:18431121 Lsi06g00089 Lsi-Chr6:897490 8.03E-16 transposed
Lsi10g00186 Lsi-Chr10:3090821 Lsi06g00089 Lsi-Chr6:897490 6.08E-07 transposed
Lsi10g01470 Lsi-Chr10:18828585 Lsi06g00089 Lsi-Chr6:897490 8.00E-09 transposed
Lsi05g01558 Lsi-Chr5:23346044 Lsi06g00089 Lsi-Chr6:897490 1.80E-116 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi01g01824 . 6 284 Carbohydrate Esterase AT2G41530 81.4 9.4e-138 486.5
Lsi07g01030 . 203 576 Carbohydrate Esterase AT4G33220 66.4 9.2e-163 570.1
Lsi06g00089 . 955 1335 Carbohydrate Esterase AT4G33220 52.7 5.6e-120 427.9
Lsi02g02434 . 218 551 Carbohydrate Esterase AT4G33220 58.1 7.6e-117 417.5
Lsi09g00673 . 202 536 Carbohydrate Esterase AT4G33220 56.4 1.2e-109 393.7
Lsi05g01321 . 496 828 Carbohydrate Esterase AT4G33220 56.2 4.9e-108 388.3
Lsi01g00409 . 219 552 Carbohydrate Esterase AT4G33220 54.8 1.2e-106 383.6
Lsi02g02855 . 243 588 Carbohydrate Esterase AT4G33220 53.2 1.8e-105 379.8
Lsi05g01942 . 187 509 Carbohydrate Esterase AT4G33220 55.4 2.8e-103 372.5
Lsi09g00498 . 191 511 Carbohydrate Esterase AT4G33220 55.3 4.1e-102 368.6
Lsi07g00641 . 226 564 Carbohydrate Esterase AT4G33220 51.9 2.2e-100 362.8
Lsi07g00642 . 246 576 Carbohydrate Esterase AT4G33220 51.6 2.7e-98 355.9
Lsi09g00023 . 264 580 Carbohydrate Esterase AT4G33220 52.2 6.3e-95 344.7
Lsi05g00647 . 194 533 Carbohydrate Esterase AT4G33220 51.5 1.8e-94 343.2
Lsi04g00186 . 233 558 Carbohydrate Esterase AT4G33220 51.9 4.1e-94 342.0
Lsi04g02274 . 254 562 Carbohydrate Esterase AT4G33220 54.5 1.3e-92 337.0
Lsi05g01943 . 165 480 Carbohydrate Esterase AT4G33220 51.3 5.0e-92 335.1
Lsi02g00946 . 666 973 Carbohydrate Esterase AT4G33220 52.0 7.9e-90 327.8
Lsi02g02855 . 60 588 Carbohydrate Esterase AT1G53830 72.3 1.4e-220 762.7
Lsi07g00641 . 40 564 Carbohydrate Esterase AT1G53830 66.0 2.4e-196 682.2
Lsi02g02108 . 25 575 Carbohydrate Esterase AT1G53830 52.6 1.0e-154 543.9
Lsi02g02434 . 39 547 Carbohydrate Esterase AT1G53830 50.8 1.4e-135 480.3
Lsi01g00409 . 117 548 Carbohydrate Esterase AT1G53830 51.5 4.2e-116 415.6
Lsi05g01942 . 1 509 Carbohydrate Esterase AT2G45220 62.0 1.2e-183 639.8
Lsi05g01321 . 340 828 Carbohydrate Esterase AT2G45220 59.2 3.0e-166 582.0
Lsi09g00498 . 9 511 Carbohydrate Esterase AT2G45220 56.7 9.8e-162 567.0
Lsi05g00647 . 17 533 Carbohydrate Esterase AT2G45220 50.9 4.0e-139 491.9
Lsi02g02434 . 107 551 Carbohydrate Esterase AT2G45220 53.5 3.5e-119 425.6
Lsi05g01943 . 59 480 Carbohydrate Esterase AT2G45220 50.8 4.2e-104 375.6
Lsi07g00642 . 1 570 Carbohydrate Esterase AT1G53840 62.9 6.1e-184 641.0
Lsi10g00718 . 56 564 Carbohydrate Esterase AT5G09760 67.8 5.3e-204 707.6
Lsi10g00719 . 19 510 Carbohydrate Esterase AT5G09760 56.2 1.4e-161 566.6
Lsi05g01942 . 100 509 Carbohydrate Esterase AT3G59010 52.8 2.3e-113 406.4
Lsi05g01321 . 405 828 Carbohydrate Esterase AT3G59010 50.6 5.0e-108 388.7
Lsi06g00089 . 822 1337 Carbohydrate Esterase AT3G05620 62.0 8.8e-193 670.2
Lsi05g01321 . 431 828 Carbohydrate Esterase AT3G05620 52.6 3.8e-111 399.1
Lsi09g01450 CCT 1 575 Carbohydrate Esterase AT3G05610 54.3 1.7e-190 662.9
Lsi06g00089 . 1342 1923 Carbohydrate Esterase AT3G05610 54.1 1.7e-185 646.4
Lsi02g02435 . 35 541 Carbohydrate Esterase AT1G02810 60.7 1.8e-188 656.0
Lsi04g02274 . 15 563 Carbohydrate Esterase AT1G02810 56.6 5.9e-171 597.8
Lsi07g01030 . 215 576 Carbohydrate Esterase AT1G02810 53.8 1.1e-105 380.9
Lsi05g01942 . 208 509 Carbohydrate Esterase AT1G02810 59.7 1.4e-100 364.0
Lsi01g00409 . 242 552 Carbohydrate Esterase AT1G02810 55.4 8.7e-98 354.8
Lsi05g00099 . 45 577 Carbohydrate Esterase AT3G49220 69.6 1.8e-208 722.6
Lsi09g00023 . 49 581 Carbohydrate Esterase AT3G49220 60.1 6.5e-187 651.0
Lsi11g00122 . 1 594 Carbohydrate Esterase AT4G33230 51.8 2.5e-172 602.4
Lsi05g01321 . 341 828 Carbohydrate Esterase AT4G00190 50.7 4.6e-129 458.4
Lsi05g01942 . 33 509 Carbohydrate Esterase AT4G00190 50.1 1.7e-128 456.4
Lsi07g01030 . 97 576 Carbohydrate Esterase AT3G43270 64.5 2.2e-193 672.2
Lsi06g00089 . 839 1335 Carbohydrate Esterase AT3G43270 50.3 1.9e-139 493.0
Lsi02g02434 . 110 551 Carbohydrate Esterase AT3G43270 50.6 2.4e-126 449.5
Lsi07g00112 . 12 352 Carbohydrate Esterase AT5G61570 57.3 2.8e-107 385.6
Lsi09g00482 . 84 351 Carbohydrate Esterase AT5G61570 51.9 1.7e-80 296.6
Lsi05g01321 . 306 828 Carbohydrate Esterase AT5G51490 54.1 2.9e-164 575.5
Lsi05g00647 . 19 533 Carbohydrate Esterase AT5G51490 56.2 2.1e-162 569.3
Lsi09g00498 . 27 511 Carbohydrate Esterase AT5G51490 54.7 1.1e-155 547.0
Lsi10g00656 . 255 554 Carbohydrate Esterase AT5G51490 51.8 3.6e-82 302.8
Lsi05g00647 . 4 529 Carbohydrate Esterase AT5G51500 55.8 4.7e-162 568.2
Lsi05g01321 . 325 828 Carbohydrate Esterase AT5G51500 55.5 3.9e-161 565.1
Lsi09g00498 . 3 511 Carbohydrate Esterase AT5G51500 51.9 3.3e-152 535.4
Lsi05g00099 . 1 577 Carbohydrate Esterase AT5G53370 62.1 4.6e-206 714.5
Lsi09g00023 . 81 581 Carbohydrate Esterase AT5G53370 65.2 1.5e-193 672.9
Lsi02g01846 . 23 288 Carbohydrate Esterase AT5G55590 60.2 3.5e-99 358.6
Lsi07g00229 . 134 273 Carbohydrate Esterase AT5G55590 51.4 3.9e-42 169.1
Lsi07g00787 . 198 344 Carbohydrate Esterase AT5G55590 50.3 1.8e-39 160.2
Lsi02g02855 . 28 588 Carbohydrate Esterase AT3G14310 70.3 1.2e-227 786.2
Lsi07g00641 . 17 564 Carbohydrate Esterase AT3G14310 64.2 3.9e-202 701.4
Lsi02g02108 . 38 575 Carbohydrate Esterase AT3G14310 55.3 2.4e-159 559.3
Lsi01g00409 . 117 552 Carbohydrate Esterase AT3G14310 50.3 6.3e-120 428.3
Lsi09g00424 . 28 329 Carbohydrate Esterase AT5G47500 74.7 8.6e-144 506.9
Lsi10g00718 . 66 560 Carbohydrate Esterase AT5G64640 62.7 1.1e-185 646.7
Lsi10g00719 . 25 506 Carbohydrate Esterase AT5G64640 54.3 8.9e-154 540.8
Lsi10g00656 . 276 550 Carbohydrate Esterase AT5G04960 52.7 3.2e-81 299.7
Lsi02g02434 . 72 547 Carbohydrate Esterase AT4G02320 56.8 1.4e-152 536.6
Lsi02g02435 . 31 541 Carbohydrate Esterase AT4G02330 60.8 2.8e-181 632.1
Lsi04g02274 . 10 561 Carbohydrate Esterase AT4G02330 55.7 2.7e-168 589.0
Lsi10g00656 . 42 556 Carbohydrate Esterase AT4G02330 50.4 2.5e-137 486.1
Lsi02g02434 . 144 551 Carbohydrate Esterase AT4G02330 50.8 5.4e-116 415.2
Lsi07g01030 . 267 576 Carbohydrate Esterase AT4G02330 57.8 6.8e-103 371.7
Lsi01g00409 . 242 552 Carbohydrate Esterase AT4G02330 54.8 5.0e-98 355.5
Lsi05g01943 . 168 480 Carbohydrate Esterase AT4G02330 53.4 2.0e-91 333.6
Lsi05g00647 . 24 533 Carbohydrate Esterase AT3G47400 55.2 5.7e-161 564.7
Lsi05g01321 . 332 828 Carbohydrate Esterase AT3G47400 52.4 3.0e-154 542.3
Lsi01g00409 . 3 548 Carbohydrate Esterase AT1G11580 56.4 2.2e-165 579.3
Lsi05g00647 . 128 530 Carbohydrate Esterase AT1G11580 50.7 4.4e-102 369.0
Lsi01g00409 . 3 548 Carbohydrate Esterase AT1G11580 56.4 2.2e-165 579.3
Lsi05g00647 . 128 530 Carbohydrate Esterase AT1G11580 50.7 4.4e-102 369.0
Lsi01g00409 . 239 483 Carbohydrate Esterase AT1G11370 58.8 2.8e-81 298.9
Lsi02g02855 . 277 518 Carbohydrate Esterase AT1G11370 54.5 1.7e-73 273.1
Lsi09g00673 . 217 468 Carbohydrate Esterase AT1G11370 52.4 7.0e-72 267.7
Lsi07g01030 . 264 506 Carbohydrate Esterase AT1G11370 53.1 2.0e-71 266.2
Lsi02g02434 . 238 481 Carbohydrate Esterase AT1G11370 54.1 3.5e-71 265.4
Lsi11g00122 . 280 527 Carbohydrate Esterase AT1G11370 50.4 1.1e-69 260.4
Lsi07g00641 . 255 494 Carbohydrate Esterase AT1G11370 51.7 2.3e-67 252.7
Lsi09g00673 . 26 536 Carbohydrate Esterase AT1G23200 51.7 1.7e-143 506.5
Lsi02g02434 . 78 550 Carbohydrate Esterase AT4G02300 54.9 2.1e-143 506.1
Lsi04g00186 . 247 555 Carbohydrate Esterase AT4G02300 53.8 2.7e-90 329.7
Lsi04g02274 . 30 563 Carbohydrate Esterase AT2G47550 58.6 4.2e-174 608.2
Lsi02g02435 . 27 541 Carbohydrate Esterase AT2G47550 57.0 2.1e-173 605.9
Lsi10g00656 . 43 556 Carbohydrate Esterase AT2G47550 51.8 1.3e-143 506.9
Lsi05g01321 . 431 828 Carbohydrate Esterase AT2G47550 50.3 2.5e-110 396.4
Lsi05g00647 . 208 529 Carbohydrate Esterase AT2G47550 56.0 2.7e-96 349.7
Lsi05g01943 . 16 480 Carbohydrate Esterase AT3G60730 52.4 1.1e-144 510.4
Lsi04g02274 . 253 565 Carbohydrate Esterase AT3G60730 53.5 4.7e-95 345.5
Lsi10g00656 . 257 554 Carbohydrate Esterase AT3G60730 50.2 1.8e-86 317.0
Lsi04g00186 . 22 559 Carbohydrate Esterase AT3G10720 61.0 1.0e-192 670.2
Lsi11g00122 . 1 594 Carbohydrate Esterase AT2G26450 52.6 1.6e-166 583.2
Lsi07g00787 . 107 382 Carbohydrate Esterase AT1G05310 57.2 1.1e-96 350.5
Lsi03g01970 . 997 1286 Carbohydrate Esterase AT1G05310 56.2 3.2e-96 349.0
Lsi05g00397 . 63 263 Carbohydrate Esterase AT5G15860 63.9 1.7e-73 273.1
Lsi09g01082 . 52 307 Carbohydrate Esterase AT5G15860 54.9 3.8e-73 271.9
Lsi04g00304 . 110 354 Carbohydrate Esterase AT5G15860 57.1 8.8e-70 260.8
Lsi05g00397 . 70 362 Carbohydrate Esterase AT3G02410 63.4 8.9e-110 394.0
Lsi09g01082 . 65 460 Carbohydrate Esterase AT3G02410 52.2 3.2e-107 385.6
Lsi04g00304 . 93 465 Carbohydrate Esterase AT3G02410 54.8 4.7e-103 371.7
Lsi05g00489 . 1 472 Carbohydrate Esterase AT5G14310 70.1 2.7e-184 641.7
Lsi07g00985 . 62 379 Carbohydrate Esterase AT5G16080 54.8 1.6e-91 333.2
Lsi04g00275 . 22 349 Carbohydrate Esterase AT1G68620 51.2 1.5e-94 343.2
Lsi09g01082 . 77 488 Carbohydrate Esterase AT1G26120 56.2 1.1e-127 453.8
Lsi04g00304 . 52 518 Carbohydrate Esterase AT1G26120 54.0 2.1e-126 449.5
Lsi05g00397 . 77 415 Carbohydrate Esterase AT1G26120 60.1 8.4e-123 437.6
Lsi05g00489 . 1 472 Carbohydrate Esterase AT3G27320 71.3 7.4e-187 650.2
Lsi06g00168 . 12 356 Carbohydrate Esterase AT3G05120 77.7 7.1e-164 573.5
Lsi02g02332 . 117 447 Carbohydrate Esterase AT3G05120 70.9 1.7e-141 499.2
Lsi02g02332 . 107 447 Carbohydrate Esterase AT3G63010 73.4 1.6e-155 545.8
Lsi06g00168 . 12 352 Carbohydrate Esterase AT3G63010 71.9 4.6e-150 527.7
Lsi04g01587 . 120 720 Carbohydrate Esterase AT5G36210 60.4 6.2e-234 807.4
Lsi04g01591 . 46 679 Carbohydrate Esterase AT5G36210 60.3 8.9e-233 803.5
Lsi04g01102 . 16 289 Carbohydrate Esterase AT1G24793 53.9 3.8e-77 285.0
Lsi04g01102 . 16 361 Carbohydrate Esterase AT1G25054 55.9 1.4e-108 389.8
Lsi06g00012 . 47 412 Carbohydrate Esterase AT2G46930 67.5 3.7e-159 558.1
Lsi07g00767 . 51 421 Carbohydrate Esterase AT2G46930 53.1 5.2e-121 431.4
Lsi05g01217 . 29 233 Carbohydrate Esterase AT2G46930 54.1 2.9e-63 239.6
Lsi07g00767 . 56 400 Carbohydrate Esterase AT4G19410 61.7 3.1e-131 465.7
Lsi06g00012 . 49 393 Carbohydrate Esterase AT4G19410 50.4 4.4e-109 392.1
Lsi05g01217 . 31 232 Carbohydrate Esterase AT4G19410 51.5 5.8e-61 232.3
Lsi07g00768 . 1 146 Carbohydrate Esterase AT4G19410 62.6 3.2e-51 199.9
Lsi07g00767 . 38 424 Carbohydrate Esterase AT4G19420 62.1 8.3e-162 567.0
Lsi06g00012 . 47 411 Carbohydrate Esterase AT4G19420 53.2 4.3e-126 448.4
Lsi05g01217 . 29 232 Carbohydrate Esterase AT4G19420 53.4 1.8e-63 240.4
Lsi06g00012 . 20 294 Carbohydrate Esterase AT3G05910 72.3 3.0e-121 431.8
Lsi07g00767 . 56 303 Carbohydrate Esterase AT3G05910 56.5 1.6e-82 303.1
Lsi05g01217 . 29 233 Carbohydrate Esterase AT3G05910 53.7 2.4e-62 236.1
Lsi06g00012 . 35 390 Carbohydrate Esterase AT1G09550 59.8 2.4e-128 455.7
Lsi07g00767 . 51 400 Carbohydrate Esterase AT1G09550 50.6 2.9e-105 379.0
Lsi06g00012 . 115 412 Carbohydrate Esterase AT5G26670 76.8 1.6e-143 505.8
Lsi07g00767 . 122 421 Carbohydrate Esterase AT5G26670 54.3 1.0e-102 370.2
Lsi05g01217 . 97 233 Carbohydrate Esterase AT5G26670 55.5 1.0e-38 157.5
Lsi06g00012 . 20 294 Carbohydrate Esterase AT3G05910 72.3 3.0e-121 431.8
Lsi07g00767 . 56 303 Carbohydrate Esterase AT3G05910 56.5 1.6e-82 303.1
Lsi05g01217 . 29 233 Carbohydrate Esterase AT3G05910 53.7 2.4e-62 236.1
Lsi07g00767 . 67 383 Carbohydrate Esterase AT3G09410 50.6 1.9e-96 349.7
Lsi05g01217 . 23 233 Carbohydrate Esterase AT3G09410 50.7 4.4e-61 232.3
Lsi07g00767 . 56 415 Carbohydrate Esterase AT5G45280 61.8 4.4e-138 488.0
Lsi06g00012 . 49 410 Carbohydrate Esterase AT5G23870 51.6 7.8e-117 417.5
Lsi05g01217 . 31 233 Carbohydrate Esterase AT5G23870 73.9 5.1e-92 335.1
Lsi06g00012 . 48 411 Carbohydrate Esterase AT3G62060 72.1 2.4e-167 585.5
Lsi07g00767 . 42 421 Carbohydrate Esterase AT3G62060 52.6 1.5e-121 433.3
Lsi05g01217 . 30 233 Carbohydrate Esterase AT3G62060 53.9 9.0e-66 248.1
Lsi06g00012 . 48 412 Carbohydrate Esterase AT1G57590 72.6 1.0e-167 586.6
Lsi07g00767 . 48 420 Carbohydrate Esterase AT1G57590 52.5 3.2e-124 442.2
Lsi05g01217 . 30 233 Carbohydrate Esterase AT1G57590 54.4 1.7e-64 243.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000192 6 4 7 5 3 4 2 4 4 4 4 4 18 4 4 18 4 8 1 4 4 5 16 7 9 3 8 10 5 3 182
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi06g00089 Lsi_Chr06 FPKM 1.079046 1.646491 2.491835 1.867834 5.913632 4.992687 5.988455 1.801822 2.178582 2.035781