Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi06g00109 | ATGGCTGGTAAAGCTCAAATTCCTACCAAAAACTCAGCGCTTATTTCTATGATTGCTGATGAGGTACGCCCAATATATATCCCTATTACAACAGCTTTTCTGGATAAATCATCCACTTTTGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTTGACCTGCGAAGGAAAACTAACTACCTTATAGTGGACTCAAAGACAACTGTTAAACAAATTGAAGATGCTTTCAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCAATATTGGAGATTCCTTCCAAGGATCATCCATATGACCCTGCACATGATTCAGTTCTTTCGCGCGTAAAGAACCTGTTTTCTACCGAATCAGTGGCATCTGGGAGGCGTTAA | 450 | 39.78 | MAGKAQIPTKNSALISMIADEVRPIYIPITTAFLDKSSTFDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLFSTESVASGRR | 149 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1045528 | 1049991 | - | Lsi06G001090.1 | Lsi06g00109 | 664839 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi06g00109 | 149 | PIRSF | V-ATP_synth_F | 3 | 142 | IPR005772 | GO:0033180|GO:0046961|GO:1902600 | |
Lsi06g00109 | 149 | TIGRFAM | V_ATP_synt_F: V-type ATPase, F subunit | 40 | 143 | IPR005772 | GO:0033180|GO:0046961|GO:1902600 | |
Lsi06g00109 | 149 | Pfam | ATP synthase (F/14-kDa) subunit | 41 | 135 | IPR008218 | GO:0034220|GO:0046961 | |
Lsi06g00109 | 149 | SUPERFAMILY | AtpF-like | 40 | 118 | IPR036906 | GO:0034220 | |
Lsi06g00109 | 149 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT F | 35 | 149 | - | - | |
Lsi06g00109 | 149 | PANTHER | VACUOLAR ATP SYNTHASE SUBUNIT F | 35 | 149 | - | - | |
Lsi06g00109 | 149 | Gene3D | ATPase, V1 complex, subunit F | 37 | 141 | IPR036906 | GO:0034220 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi06g00109 | K02151 | - | csv:101215239 | 240.35 |