Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi06g00265 ATGGAGAAGGGTCATCTAGATGTGGCTGGGAAAGTGGTGGTTGTCGCCATTAAAGCCACCTCGAAGGAAGTTTCTAAGGTTGCTCTCGTTTGGGCTTTGACGCATGTTGTTCAGCCTGGAGATCAGATTAAGCTCCTTGTGGTTATCCCTTCTCATCAATCAAGTAAATGGATGCGGGGATTTTCTCGACTTACCAGCGATTGTGCGATTGGTCATCTGAGAACTCCTTCAGGAACTTTTTCCGATAGGAAGGATGACATTGTGCATTCATGTTCTCAGATGGTGCATCAGCTTCATGGTGCATATGACCCACTGAAGATAAAAGTAAGGATCAAAGTTCTTTCTGGTTTGGCTCGGGGTATGGTGGCTACTGAAGCTAAGAAAGCTCAATCGAACTGGGTGATATTGGATAAGAATTTGAAAGATGAAAGGAAAAACTGTTTGGAAGAGCTGCAATGCAATGTTGTTCTTATGAAGAAATCTCAGCCTAAGGTTCTTCGTCTGAATTTGATGGAATCCCCTAAAATAAATACTAGAGAAGCTTGGATATCATCACATGAATTAGATGTTTCTCAGAAGTGTCTTAAAAGCTATTTCGACGAATCGATCATGTTTAGGGCTCCTAATATGACTCCTGACAGTACTCCTGATGTAGAGTCTCCTCTTACCGTAACTGATATTGGAACATCATCAATATCGAGCTCAGATGTGGGCAGTTCATCCTTGTTCTCTGGGATTTGTGGCAGCTTGAGAAATGAATCCAGAACAGCAACCGACAGAGGGAGAAATATGTCAGGATCTGAATATGATTCTGAGAGCGAAAAGCAAACTCCCTCAGTTTCATATTTCCAGCGTTGTATGGTTGATATTATAAGTTCCAGGCGTAAATTCCAGCAACACACAATGGAAGAATCACAGAATGCTCATCATAGACCTCCGGCTCAAACACGTCAAGATCTGGTAAAAAAAATGCCTAATCTTTCTCTAGAACCTAGCACTGATGTGGCACATCGCAATACCGATATTAGCTCAAGCAGAAACATAAGGAACACGGTTTCGTTATCCAGAAAAGCACCTCTAGGCCCTCCTCCGCTGTGTTCTATGTGCCAACACAAGGCCCCTGCATTTGGGAATCCTCCTAGATGGTTCACTTATGCCGAACTTGAAGTCGCTACAAGTGGGTTTGCACAAACCAATTTTTTGGCTGAGGGTGGATTTGGGTCTGTGCACCGAGGCATCTTATCAGATGGACAAGTTGTTGCTGTCAAGCAATATAAACTGGCCAGTACCCAGGGAGATCGAGAGTTTTGTTCAGAAGTTGAGGTCTTAAGTTGTGCCCAACATCGGAACGTTGTGATGCTCATTGGATTTTGTGTGGAGGGTGGAAGAAGGTTACTTGTTTATGAATATATTTGCAATGGATCTCTTGATTCCCATCTATATGGAAGAAATCGTGATCCACTGAAATGGTCTGCACGACAAAAGATTGCAGTTGGGGCTGCTCGAGGATTGAGATACCTTCACGAAGAATGTAGAGTGGGCTGTATTGTGCACCGTGATATCCGCCCAAACAATATCCTCCTTACTCATGATTTTGAGCCACTAGTTGGAGATTTTGGGCTGGCAAGGTGGCAGCCGGATGGCGACCTAGCAGTAGAAACCAGAATCCTTGGGAGATTTGGCTACCTGGCTCCAGAGTATGCACAGAGTGGCCAAATCACAGAGAAAGCCGATACATACTCGTTTGGCGTAGTCTTGCTGGAACTCGTGACTGGACGCAAAGCGATTGATTTAAATCGTCCCAAGGGCCAGCAATGCCTCACTGAATGGGCGCGAAACCTGTTGCGGAAAGATGCAATCTCTGAACTGGTCGATCCATGTTTGAGGAACTGTTATTCAGACGAGGAAGTTCACCGCATGCTACAATGCGCTTCCTTGTGCATCAAGCGTGATCCGTACGTAAGACCGCGTGCTTCGGGTTTTGGAGGGCGACATCGTTTTGTAAAGCAGCAGCAGCCATATAGGAAGCTTGCAGGAAAATTTTGCAGAGTTGTAACAATATATGCTCTGGAATCAACACGCAGATGGCTAAGGGGATGTTGGATTGTTTCGGGAGACGCGACGTCGGAAACTACCGTTGGAAGAAGCTCTACGTTCATTCATCCAACTGCTGTCGTACATCCGAATGCTGTAATTGGCGAGGATGGGTATATTGGTCCATTCTGTACTGTGGGAGCCTTTGCAAAGCTGGGAAATGGTTGTCAATTGTATCCTGGGAGCCACATTTTTGGCTGTACAGAACTAGGGGATCGATGTGTCCTGATGACTGGCGCTATAGTTGGTGAGGATCTTCCTGGTCGCACAGTCATTGGGTGTAATAACAAAATAGGTCACCATGCAGTGGTTGGCATTAGATGTCAAGACATGAAATACAAGGTTGGGGATGAATGTTTTCTTGATATTGGAGATAACAATGACATAAGAGAACATTCATCAATCCACCGATCATCGAAGTCCAGTGATGTGACGGCTATTGGCGATAGTAATCTCATAATGGGATCCTGTCATATTGCCCATGATTGCAAGATTGGTAACAACAATATTTTTGCAAATAATACTCTTTTAGCCGGCCACGTTGTGGTGGAGGACTATGTTCACACAGGAGGCACCACCGCAGTCCATCAATTCTGCCATGTTGGTTCTTTCTCATTTGTTGCTGCGGGTTCGATGGTTTCACAAGATGTCCCCAAATATATGATGGTCGGGGGAGAAAGACCGGAACTACGTGGTTTGAATCTAGAGGGACTTCGGCGCAATGGATTCACGGCGGAAGAGATCATTGGCTTGAGATCTGCTTACAGGAAGTTATTCATGTCTACTGATACAAATTCTAAAGGGTTGGAAGAACGTCTCAACGAAGTGGAACAGCATGAAAAGTTGGCTCACATATCTTCAGTGCATTCCATGATTCAGTCCATTCGTGCCTCATTTGAACAAAATCGTCGGGGCATTTGCAAATTCAGACTATGGAGTGGCTCTTAA 3042 44.87 MEKGHLDVAGKVVVVAIKATSKEVSKVALVWALTHVVQPGDQIKLLVVIPSHQSSKWMRGFSRLTSDCAIGHLRTPSGTFSDRKDDIVHSCSQMVHQLHGAYDPLKIKVRIKVLSGLARGMVATEAKKAQSNWVILDKNLKDERKNCLEELQCNVVLMKKSQPKVLRLNLMESPKINTREAWISSHELDVSQKCLKSYFDESIMFRAPNMTPDSTPDVESPLTVTDIGTSSISSSDVGSSSLFSGICGSLRNESRTATDRGRNMSGSEYDSESEKQTPSVSYFQRCMVDIISSRRKFQQHTMEESQNAHHRPPAQTRQDLVKKMPNLSLEPSTDVAHRNTDISSSRNIRNTVSLSRKAPLGPPPLCSMCQHKAPAFGNPPRWFTYAELEVATSGFAQTNFLAEGGFGSVHRGILSDGQVVAVKQYKLASTQGDREFCSEVEVLSCAQHRNVVMLIGFCVEGGRRLLVYEYICNGSLDSHLYGRNRDPLKWSARQKIAVGAARGLRYLHEECRVGCIVHRDIRPNNILLTHDFEPLVGDFGLARWQPDGDLAVETRILGRFGYLAPEYAQSGQITEKADTYSFGVVLLELVTGRKAIDLNRPKGQQCLTEWARNLLRKDAISELVDPCLRNCYSDEEVHRMLQCASLCIKRDPYVRPRASGFGGRHRFVKQQQPYRKLAGKFCRVVTIYALESTRRWLRGCWIVSGDATSETTVGRSSTFIHPTAVVHPNAVIGEDGYIGPFCTVGAFAKLGNGCQLYPGSHIFGCTELGDRCVLMTGAIVGEDLPGRTVIGCNNKIGHHAVVGIRCQDMKYKVGDECFLDIGDNNDIREHSSIHRSSKSSDVTAIGDSNLIMGSCHIAHDCKIGNNNIFANNTLLAGHVVVEDYVHTGGTTAVHQFCHVGSFSFVAAGSMVSQDVPKYMMVGGERPELRGLNLEGLRRNGFTAEEIIGLRSAYRKLFMSTDTNSKGLEERLNEVEQHEKLAHISSVHSMIQSIRASFEQNRRGICKFRLWSGS 1013
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2982630 2994965 + Lsi06G002650.1 Lsi06g00265 664995

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi06g00265 1013 ProSiteProfiles Protein kinase domain profile. 395 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi06g00265 1013 CDD LbH_UDP-GlcNAc_AT 720 1004 IPR010137 GO:0008610|GO:0008780
Lsi06g00265 1013 PANTHER OS01G0253100 PROTEIN 11 659 IPR045271 GO:0004714|GO:0006468
Lsi06g00265 1013 Gene3D - 932 1013 IPR037157 -
Lsi06g00265 1013 Pfam Bacterial transferase hexapeptide (six repeats) 845 876 IPR001451 -
Lsi06g00265 1013 PANTHER - 11 659 - -
Lsi06g00265 1013 SUPERFAMILY Trimeric LpxA-like enzymes 697 924 IPR011004 -
Lsi06g00265 1013 CDD STKc_IRAK 401 659 - -
Lsi06g00265 1013 Pfam Udp N-acetylglucosamine O-acyltransferase; Domain 2 914 1005 IPR029098 -
Lsi06g00265 1013 SUPERFAMILY Protein kinase-like (PK-like) 378 662 IPR011009 -
Lsi06g00265 1013 Gene3D Transferase(Phosphotransferase) domain 1 471 675 - -
Lsi06g00265 1013 Gene3D Phosphorylase Kinase; domain 1 366 470 - -
Lsi06g00265 1013 Gene3D Hexapeptide repeat proteins 713 931 - -
Lsi06g00265 1013 MobiDBLite consensus disorder prediction 254 276 - -
Lsi06g00265 1013 ProSitePatterns Tyrosine protein kinases specific active-site signature. 516 528 IPR008266 GO:0004672|GO:0006468
Lsi06g00265 1013 SMART tyrkin_6 395 667 IPR020635 GO:0004713|GO:0006468
Lsi06g00265 1013 Pfam Protein tyrosine and serine/threonine kinase 399 639 IPR001245 GO:0004672|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi06g00265 - - - csv:101208373 1243.41
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g00757 Lsi-Chr4:7044522 Lsi06g00265 Lsi-Chr6:2982630 2.98E-77 dispersed
Lsi04g01631 Lsi-Chr4:23798960 Lsi06g00265 Lsi-Chr6:2982630 5.39E-35 dispersed
Lsi06g00265 Lsi-Chr6:2982630 Lsi11g00260 Lsi-Chr11:2621815 5.80E-90 dispersed
Lsi06g00265 Lsi-Chr6:2982630 Lsi07g00562 Lsi-Chr7:5966015 1.59E-08 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi11g202 . . . . . . Bma07g00529 . . Cmo11g00692 . . . . Sed14g0420 . . Bhi02g01909 Tan09g1161 Cmetu07g2248 . . . . . . . . . . . . . Cone4ag0788 . Lsi06g00265 . . Cme02g00225 Blo08g00336 . . . Bpe08g00513 . . . . . . . Cma11g00681 . Car11g00565 . . . . . . . . . . . . . . . . . Csa01g02911 Chy02g01205 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi11g00270 CCT 33 391 Trihelix Transcription Factor Family AT1G12040 64.3 9.6e-41 165.6
Lsi06g00890 CCT 46 220 Trihelix Transcription Factor Family AT1G12040 64.0 2.9e-37 154.1
Lsi04g01602 . 38 291 Trihelix Transcription Factor Family AT1G12040 56.3 2.9e-37 154.1
Lsi05g01631 . 39 364 Trihelix Transcription Factor Family AT1G12040 53.3 2.4e-36 151.0
Lsi11g00270 CCT 15 391 Trihelix Transcription Factor Family AT4G18670 83.1 2.4e-67 254.2
Lsi06g00890 CCT 13 393 Trihelix Transcription Factor Family AT4G18670 80.4 5.8e-66 249.6
Lsi04g01602 . 24 217 Trihelix Transcription Factor Family AT4G18670 71.8 6.5e-41 166.4
Lsi09g01583 . 28 221 Trihelix Transcription Factor Family AT4G18670 59.0 2.5e-40 164.5
Lsi09g01584 . 28 221 Trihelix Transcription Factor Family AT4G18670 59.0 2.5e-40 164.5
Lsi09g01584 . 8 422 Trihelix Transcription Factor Family AT3G19020 61.3 1.3e-58 225.3
Lsi09g01583 . 8 416 Trihelix Transcription Factor Family AT3G19020 61.7 8.3e-58 222.6
Lsi04g01602 . 19 217 Trihelix Transcription Factor Family AT3G19020 78.4 8.0e-53 206.1
Lsi06g00890 CCT 4 220 Trihelix Transcription Factor Family AT3G19020 67.1 8.3e-42 169.5
Lsi11g00270 CCT 10 207 Trihelix Transcription Factor Family AT3G19020 69.0 1.0e-39 162.5
Lsi09g01583 . 64 397 Trihelix Transcription Factor Family AT1G49490 66.1 1.0e-46 185.7
Lsi09g01584 . 64 397 Trihelix Transcription Factor Family AT1G49490 66.1 1.0e-46 185.7
Lsi04g01602 . 5 217 Trihelix Transcription Factor Family AT1G49490 67.6 6.4e-41 166.4
Lsi06g00890 CCT 57 394 Trihelix Transcription Factor Family AT1G49490 74.0 1.1e-40 165.6
Lsi11g00270 CCT 44 376 Trihelix Transcription Factor Family AT1G49490 75.7 1.9e-40 164.9
Lsi09g01584 . 27 420 Trihelix Transcription Factor Family AT2G15880 62.7 3.8e-66 250.0
Lsi09g01583 . 27 397 Trihelix Transcription Factor Family AT2G15880 67.0 6.4e-66 249.2
Lsi04g01602 . 24 219 Trihelix Transcription Factor Family AT2G15880 78.6 3.1e-52 203.8
Lsi11g00270 CCT 15 391 Trihelix Transcription Factor Family AT2G15880 66.8 7.2e-41 166.0
Lsi06g00890 CCT 27 398 Trihelix Transcription Factor Family AT2G15880 67.0 2.1e-40 164.5
Lsi09g01583 . 13 409 Trihelix Transcription Factor Family AT4G33970 62.8 9.6e-59 225.3
Lsi09g01584 . 13 409 Trihelix Transcription Factor Family AT4G33970 62.8 9.6e-59 225.3
Lsi04g01602 . 3 219 Trihelix Transcription Factor Family AT4G33970 70.5 5.8e-48 189.5
Lsi08g01612 . 1 198 Trihelix Transcription Factor Family AT1G13450 66.1 4.1e-67 251.5
Lsi03g02220 CCT 57 309 Trihelix Transcription Factor Family AT5G01380 58.1 1.4e-49 193.7
Lsi11g00270 CCT 15 391 Trihelix Transcription Factor Family AT4G18670 83.1 2.4e-67 254.2
Lsi06g00890 CCT 13 393 Trihelix Transcription Factor Family AT4G18670 80.4 5.8e-66 249.6
Lsi04g01602 . 24 217 Trihelix Transcription Factor Family AT4G18670 71.8 6.5e-41 166.4
Lsi09g01583 . 28 221 Trihelix Transcription Factor Family AT4G18670 59.0 2.5e-40 164.5
Lsi09g01584 . 28 221 Trihelix Transcription Factor Family AT4G18670 59.0 2.5e-40 164.5
Lsi09g01583 . 13 409 Trihelix Transcription Factor Family AT4G33970 62.8 9.6e-59 225.3
Lsi09g01584 . 13 409 Trihelix Transcription Factor Family AT4G33970 62.8 9.6e-59 225.3
Lsi04g01602 . 3 219 Trihelix Transcription Factor Family AT4G33970 70.5 5.8e-48 189.5
Lsi08g00290 . 59 597 Trihelix Transcription Factor Family AT1G76880 52.9 1.1e-106 384.4
Lsi08g00289 . 49 473 Trihelix Transcription Factor Family AT1G76880 60.2 5.9e-89 325.5
Lsi03g01930 . 101 367 Trihelix Transcription Factor Family AT3G10000 53.0 2.1e-62 236.9
Lsi09g01584 . 8 422 Trihelix Transcription Factor Family AT3G19020 61.3 1.3e-58 225.3
Lsi09g01583 . 8 416 Trihelix Transcription Factor Family AT3G19020 61.7 8.3e-58 222.6
Lsi04g01602 . 19 217 Trihelix Transcription Factor Family AT3G19020 78.4 8.0e-53 206.1
Lsi06g00890 CCT 4 220 Trihelix Transcription Factor Family AT3G19020 67.1 8.3e-42 169.5
Lsi11g00270 CCT 10 207 Trihelix Transcription Factor Family AT3G19020 69.0 1.0e-39 162.5
Lsi09g01583 . 64 397 Trihelix Transcription Factor Family AT1G49490 66.1 1.0e-46 185.7
Lsi09g01584 . 64 397 Trihelix Transcription Factor Family AT1G49490 66.1 1.0e-46 185.7
Lsi04g01602 . 5 217 Trihelix Transcription Factor Family AT1G49490 67.6 6.4e-41 166.4
Lsi06g00890 CCT 57 394 Trihelix Transcription Factor Family AT1G49490 74.0 1.1e-40 165.6
Lsi11g00270 CCT 44 376 Trihelix Transcription Factor Family AT1G49490 75.7 1.9e-40 164.9
Lsi03g00221 . 300 680 Trihelix Transcription Factor Family AT1G68690 65.7 6.1e-140 495.0
Lsi04g00311 . 1083 1467 Trihelix Transcription Factor Family AT1G68690 63.2 4.6e-135 478.8
Lsi04g00550 . 324 663 Trihelix Transcription Factor Family AT1G68690 64.4 2.2e-121 433.3
Lsi11g00260 . 282 570 Trihelix Transcription Factor Family AT1G68690 64.4 3.2e-112 402.9
Lsi06g00871 . 230 518 Trihelix Transcription Factor Family AT1G68690 64.7 1.2e-111 401.0
Lsi03g01118 . 362 650 Trihelix Transcription Factor Family AT1G68690 55.5 1.6e-84 310.8
Lsi05g01067 . 359 639 Trihelix Transcription Factor Family AT1G68690 56.7 4.8e-84 309.3
Lsi07g00562 . 483 783 Trihelix Transcription Factor Family AT1G68690 51.1 1.5e-82 304.3
Lsi02g02938 . 532 813 Trihelix Transcription Factor Family AT1G68690 54.7 1.2e-79 294.7
Lsi03g02064 . 46 350 Trihelix Transcription Factor Family AT1G68690 51.8 1.5e-77 287.7
Lsi05g01512 . 74 358 Trihelix Transcription Factor Family AT1G68690 51.4 3.3e-77 286.6
Lsi09g01752 . 73 357 Trihelix Transcription Factor Family AT1G68690 50.3 5.7e-77 285.8
Lsi07g00440 . 27 307 Trihelix Transcription Factor Family AT1G68690 50.9 5.7e-77 285.8
Lsi04g01809 CCT,ECH 45 326 Trihelix Transcription Factor Family AT1G68690 50.5 2.4e-75 280.4
Lsi03g00221 . 271 626 Trihelix Transcription Factor Family AT1G26150 61.6 1.9e-117 420.2
Lsi04g00311 . 1103 1413 Trihelix Transcription Factor Family AT1G26150 67.7 3.0e-115 412.9
Lsi04g00550 . 367 609 Trihelix Transcription Factor Family AT1G26150 70.8 2.6e-98 356.7
Lsi11g00260 . 282 516 Trihelix Transcription Factor Family AT1G26150 68.5 2.4e-96 350.1
Lsi06g00871 . 227 464 Trihelix Transcription Factor Family AT1G26150 67.5 4.1e-96 349.4
Lsi06g00279 . 648 885 Trihelix Transcription Factor Family AT1G26150 59.2 9.5e-77 285.0
Lsi03g02064 . 31 290 Trihelix Transcription Factor Family AT1G26150 54.6 6.8e-75 278.9
Lsi03g01118 . 363 599 Trihelix Transcription Factor Family AT1G26150 60.1 1.2e-74 278.1
Lsi02g02938 . 506 762 Trihelix Transcription Factor Family AT1G26150 53.7 2.4e-72 270.4
Lsi11g01100 . 126 370 Trihelix Transcription Factor Family AT1G26150 53.2 7.0e-72 268.9
Lsi07g00562 . 476 733 Trihelix Transcription Factor Family AT1G26150 51.2 2.7e-71 266.9
Lsi08g01486 . 504 733 Trihelix Transcription Factor Family AT1G26150 53.0 1.3e-70 264.6
Lsi09g01752 . 69 304 Trihelix Transcription Factor Family AT1G26150 54.7 5.0e-70 262.7
Lsi11g00025 . 714 948 Trihelix Transcription Factor Family AT1G26150 52.8 6.6e-70 262.3
Lsi10g01538 . 175 404 Trihelix Transcription Factor Family AT1G26150 55.6 8.6e-70 261.9
Lsi05g01512 . 72 305 Trihelix Transcription Factor Family AT1G26150 55.6 7.3e-69 258.8
Lsi02g01412 . 79 320 Trihelix Transcription Factor Family AT1G26150 53.5 9.5e-69 258.5
Lsi06g01108 CCT 18 256 Trihelix Transcription Factor Family AT1G26150 50.6 9.5e-69 258.5
Lsi01g00968 . 547 776 Trihelix Transcription Factor Family AT1G26150 50.9 1.6e-68 257.7
Lsi11g01627 . 181 410 Trihelix Transcription Factor Family AT1G26150 54.7 2.1e-68 257.3
Lsi04g01809 CCT,ECH 45 274 Trihelix Transcription Factor Family AT1G26150 55.2 2.1e-68 257.3
Lsi04g00826 . 32 276 Trihelix Transcription Factor Family AT1G26150 53.5 2.8e-68 256.9
Lsi02g00755 . 74 309 Trihelix Transcription Factor Family AT1G26150 52.1 1.8e-67 254.2
Lsi07g00440 . 15 257 Trihelix Transcription Factor Family AT1G26150 50.6 4.0e-67 253.1
Lsi06g00150 . 129 361 Trihelix Transcription Factor Family AT1G26150 50.6 6.4e-65 245.7
Lsi03g01282 . 57 288 Trihelix Transcription Factor Family AT1G26150 50.9 7.0e-64 242.3
Lsi04g00318 CCT,ECH 257 485 Trihelix Transcription Factor Family AT1G26150 50.2 1.6e-63 241.1
Lsi01g01353 . 30 267 Trihelix Transcription Factor Family AT1G26150 50.8 2.0e-63 240.7
Lsi05g01245 . 1018 1247 Trihelix Transcription Factor Family AT1G26150 50.9 5.9e-63 239.2
Lsi03g00789 . 63 295 Trihelix Transcription Factor Family AT1G26150 50.6 5.0e-62 236.1
Lsi01g01104 . 876 1104 Trihelix Transcription Factor Family AT1G26150 50.9 8.6e-62 235.3
Lsi05g00137 . 763 991 Trihelix Transcription Factor Family AT1G26150 51.1 1.9e-61 234.2
Lsi01g00393 . 262 492 Trihelix Transcription Factor Family AT1G26150 50.2 1.9e-61 234.2
Lsi03g00939 . 315 547 Trihelix Transcription Factor Family AT1G26150 50.2 2.5e-61 233.8
Lsi02g02522 . 70 303 Trihelix Transcription Factor Family AT1G26150 50.2 4.3e-61 233.0
Lsi04g00550 . 280 559 Trihelix Transcription Factor Family AT1G23540 62.5 3.3e-91 332.8
Lsi06g00871 . 208 414 Trihelix Transcription Factor Family AT1G23540 67.1 2.3e-76 283.5
Lsi03g00221 . 399 576 Trihelix Transcription Factor Family AT1G23540 73.0 1.2e-74 277.7
Lsi11g00260 . 282 466 Trihelix Transcription Factor Family AT1G23540 69.2 1.8e-73 273.9
Lsi04g00311 . 1177 1363 Trihelix Transcription Factor Family AT1G23540 66.8 3.2e-70 263.1
Lsi11g01627 . 168 360 Trihelix Transcription Factor Family AT1G23540 52.6 6.0e-53 205.7
Lsi10g01538 . 147 354 Trihelix Transcription Factor Family AT1G23540 50.7 2.3e-52 203.8
Lsi11g01100 . 142 321 Trihelix Transcription Factor Family AT1G23540 54.4 5.1e-52 202.6
Lsi01g00968 . 536 726 Trihelix Transcription Factor Family AT1G23540 51.0 2.5e-51 200.3
Lsi08g01486 . 493 683 Trihelix Transcription Factor Family AT1G23540 50.5 4.3e-51 199.5
Lsi06g00279 . 642 835 Trihelix Transcription Factor Family AT1G23540 51.8 7.4e-51 198.7
Lsi06g01088 . 375 552 Trihelix Transcription Factor Family AT1G23540 55.0 6.2e-50 195.7
Lsi10g00357 . 261 398 Trihelix Transcription Factor Family AT1G23540 66.7 6.2e-50 195.7
Lsi04g00318 CCT,ECH 258 434 Trihelix Transcription Factor Family AT1G23540 54.7 2.4e-49 193.7
Lsi02g02938 . 531 712 Trihelix Transcription Factor Family AT1G23540 52.7 3.1e-49 193.4
Lsi04g01809 CCT,ECH 45 225 Trihelix Transcription Factor Family AT1G23540 53.6 4.0e-49 193.0
Lsi05g01067 . 359 538 Trihelix Transcription Factor Family AT1G23540 53.9 4.0e-49 193.0
Lsi09g00786 CCT,ECH 291 467 Trihelix Transcription Factor Family AT1G23540 53.6 6.9e-49 192.2
Lsi06g00265 . 376 561 Trihelix Transcription Factor Family AT1G23540 50.5 6.9e-49 192.2
Lsi07g00440 . 28 207 Trihelix Transcription Factor Family AT1G23540 52.8 1.2e-48 191.4
Lsi03g00201 . 292 486 Trihelix Transcription Factor Family AT1G23540 52.3 2.0e-48 190.7
Lsi08g01665 . 286 466 Trihelix Transcription Factor Family AT1G23540 51.4 3.8e-47 186.4
Lsi03g01118 . 362 549 Trihelix Transcription Factor Family AT1G23540 53.7 3.8e-47 186.4
Lsi11g00025 . 719 897 Trihelix Transcription Factor Family AT1G23540 51.4 4.9e-47 186.0
Lsi03g00939 . 315 495 Trihelix Transcription Factor Family AT1G23540 53.6 6.5e-47 185.7
Lsi05g01245 . 1018 1193 Trihelix Transcription Factor Family AT1G23540 51.7 8.4e-47 185.3
Lsi03g02297 . 921 1085 Trihelix Transcription Factor Family AT1G23540 52.7 1.9e-46 184.1
Lsi05g00137 . 763 938 Trihelix Transcription Factor Family AT1G23540 52.8 3.2e-46 183.3
Lsi03g01956 . 1958 2135 Trihelix Transcription Factor Family AT1G23540 51.1 3.2e-46 183.3
Lsi02g02638 . 802 977 Trihelix Transcription Factor Family AT1G23540 50.6 3.2e-46 183.3
Lsi01g01104 . 876 1055 Trihelix Transcription Factor Family AT1G23540 51.7 3.2e-46 183.3
Lsi08g01207 CCT,ECH 479 662 Trihelix Transcription Factor Family AT1G23540 50.3 1.6e-45 181.0
Lsi03g00789 . 63 243 Trihelix Transcription Factor Family AT1G23540 51.9 1.6e-45 181.0
Lsi04g00839 . 469 642 Trihelix Transcription Factor Family AT1G23540 51.1 1.0e-44 178.3
Lsi08g01612 . 1 381 Trihelix Transcription Factor Family AT3G25990 65.1 2.2e-139 492.3
Lsi11g00270 CCT 33 391 Trihelix Transcription Factor Family AT1G12040 64.3 9.6e-41 165.6
Lsi06g00890 CCT 46 220 Trihelix Transcription Factor Family AT1G12040 64.0 2.9e-37 154.1
Lsi04g01602 . 38 291 Trihelix Transcription Factor Family AT1G12040 56.3 2.9e-37 154.1
Lsi05g01631 . 39 364 Trihelix Transcription Factor Family AT1G12040 53.3 2.4e-36 151.0
Lsi03g02220 CCT 54 312 Trihelix Transcription Factor Family AT2G38250 63.7 5.0e-54 208.4
Lsi03g00221 . 293 759 Trihelix Transcription Factor Family AT5G38560 68.4 6.1e-175 611.3
Lsi04g00311 . 1072 1525 Trihelix Transcription Factor Family AT5G38560 59.5 5.9e-146 515.0
Lsi04g00550 . 270 731 Trihelix Transcription Factor Family AT5G38560 55.3 2.5e-136 483.0
Lsi11g00260 . 252 625 Trihelix Transcription Factor Family AT5G38560 58.2 1.7e-121 433.7
Lsi06g00871 . 214 584 Trihelix Transcription Factor Family AT5G38560 58.2 1.5e-120 430.6
Lsi03g01118 . 366 681 Trihelix Transcription Factor Family AT5G38560 52.2 2.0e-85 313.9
Lsi06g00279 . 655 940 Trihelix Transcription Factor Family AT5G38560 54.0 8.7e-81 298.5
Lsi07g00562 . 482 788 Trihelix Transcription Factor Family AT5G38560 50.2 1.1e-80 298.1
Lsi02g02938 . 532 828 Trihelix Transcription Factor Family AT5G38560 51.2 3.6e-79 293.1
Lsi05g01067 . 359 653 Trihelix Transcription Factor Family AT5G38560 51.7 1.4e-78 291.2
Lsi11g01627 . 180 465 Trihelix Transcription Factor Family AT5G38560 50.2 1.6e-74 277.7
Lsi11g00260 . 289 650 Trihelix Transcription Factor Family AT4G32710 63.8 6.8e-124 441.8
Lsi06g00871 . 218 596 Trihelix Transcription Factor Family AT4G32710 60.7 1.0e-119 427.9
Lsi04g00550 . 331 729 Trihelix Transcription Factor Family AT4G32710 53.3 8.4e-106 381.7
Lsi03g00221 . 399 697 Trihelix Transcription Factor Family AT4G32710 62.3 2.7e-104 376.7
Lsi04g00311 . 1183 1472 Trihelix Transcription Factor Family AT4G32710 62.5 4.0e-100 362.8
Lsi04g01809 CCT,ECH 45 331 Trihelix Transcription Factor Family AT4G32710 50.7 7.9e-72 268.9
Lsi04g00550 . 269 723 Trihelix Transcription Factor Family AT1G70460 65.7 2.0e-160 563.1
Lsi03g00221 . 307 726 Trihelix Transcription Factor Family AT1G70460 59.6 1.4e-137 487.3
Lsi11g00260 . 281 633 Trihelix Transcription Factor Family AT1G70460 64.3 7.6e-128 454.9
Lsi04g00311 . 1177 1522 Trihelix Transcription Factor Family AT1G70460 64.9 1.7e-127 453.8
Lsi06g00871 . 224 567 Trihelix Transcription Factor Family AT1G70460 65.4 4.9e-127 452.2
Lsi03g01118 . 362 654 Trihelix Transcription Factor Family AT1G70460 53.7 1.3e-79 294.7
Lsi06g00265 . 375 657 Trihelix Transcription Factor Family AT1G70460 50.5 2.2e-79 293.9
Lsi06g00279 . 650 940 Trihelix Transcription Factor Family AT1G70460 51.2 2.5e-78 290.4
Lsi10g01538 . 164 461 Trihelix Transcription Factor Family AT1G70460 50.2 4.2e-78 289.7
Lsi07g00440 . 28 314 Trihelix Transcription Factor Family AT1G70460 50.2 7.9e-77 285.4
Lsi02g02938 . 531 817 Trihelix Transcription Factor Family AT1G70460 50.7 6.7e-76 282.3
Lsi05g01067 . 359 643 Trihelix Transcription Factor Family AT1G70460 51.7 6.7e-76 282.3
Lsi04g01809 CCT,ECH 45 331 Trihelix Transcription Factor Family AT1G70460 50.7 4.4e-75 279.6
Lsi09g01584 . 27 420 Trihelix Transcription Factor Family AT2G15880 62.7 3.8e-66 250.0
Lsi09g01583 . 27 397 Trihelix Transcription Factor Family AT2G15880 67.0 6.4e-66 249.2
Lsi04g01602 . 24 219 Trihelix Transcription Factor Family AT2G15880 78.6 3.1e-52 203.8
Lsi11g00270 CCT 15 391 Trihelix Transcription Factor Family AT2G15880 66.8 7.2e-41 166.0
Lsi06g00890 CCT 27 398 Trihelix Transcription Factor Family AT2G15880 67.0 2.1e-40 164.5
Lsi03g01930 . 101 367 Trihelix Transcription Factor Family AT5G03680 58.2 5.6e-76 282.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007744 1 1 1 0 1 0 2 0 1 1 1 0 2 1 0 2 0 1 2 0 1 0 0 0 0 1 0 0 1 1 21
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83698 PF07714 PK_Tyr_Ser-Thr 2.00E-40 CL0016 Lsi PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi06g00265 Lsi_Chr06 FPKM 2.659887 4.391136 432.073303 426.697723 9.668838 8.316183 7.135627 1.194359 0.615422 1.230612