Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi06g00370 | ATGGGGAGAGAACTGCAGAAGCAGCCGCAGCAAGAGATGGCCTCCGCGGTAGAGCAGTTGCTTGCCGTGAATCCTTACAATCCCGACATTCTCCCCGATCTCGAAAACTACGTAAACGAGCAGGTCTCGTCAGAAACGTACAGTTTAGATGCCAATCTATGCCTTCTTCGCCTCTACCAGTTTGAGCCAGAGAGAATGAGTACCCAAATTGTGGCTCGCATCCTGGTCAAGGCTCTGATGGCAATGCCAGCTCCGGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGACTGGAAAGTTCCGTCAATTCTGGGATGAAGCTGCCAAGAATCGTCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCAATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTACTTGCGGAGGCAATCAATATTGAGGGCCTGTCTTTGGACAAATTCCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTCATGGGAAAGGCCAACTTATTGTTATACCACCCAACGAATTCAACCATCCTGAACTAAAGAAGAAATCCTCCGACAGCATTCCCTTGGATCACATTACTCGCATCTTTCCGATTCTTGGCTAA | 648 | 46.76 | MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVTGKFRQFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLDHITRIFPILG | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4095210 | 4098424 | + | Lsi06G003700.1 | Lsi06g00370 | 665100 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi06g00370 | 215 | Hamap | Eukaryotic translation initiation factor 3 subunit K [EIF3K]. | 8 | 215 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
Lsi06g00370 | 215 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K | 8 | 215 | - | - | |
Lsi06g00370 | 215 | SUPERFAMILY | Winged helix DNA-binding domain | 120 | 212 | IPR036390 | - | |
Lsi06g00370 | 215 | Pfam | CSN8/PSMD8/EIF3K family | 100 | 177 | IPR033464 | - | |
Lsi06g00370 | 215 | SUPERFAMILY | ARM repeat | 10 | 118 | IPR016024 | - | |
Lsi06g00370 | 215 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 | 8 | 215 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
Lsi06g00370 | 215 | Gene3D | ARM repeat; domain 1 | 8 | 130 | IPR016020 | GO:0003743|GO:0005852|GO:0006446|GO:0043022 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi06g00370 | K15028 | - | csv:101214255 | 409.838 |