Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi06g00437 ATGGCCGAGGTTATGAACATGGCCGCCGCCGCCGACGAGTCCTTGGACCGCCGTCGTGATCGTCAAGAGAAATCGTCTGAGGAGCAACCTCATTCCTCGCCGCCGCCGCCGCCAGCTGGTGCTCCTCCTCCTCCCTCTAGAAGAAGGGATAGAGATGAGAGAGATAGGAGAGATGACCGGGATATTGATCGTCCTCCGAATCGACGCGGTGATAATTACGATCGTAATCGCTCTCCGCCTTCGCTGCCTCCGAGGGACAGAGATAGAGATAGAGATAGGGATTATAAACGTCGGAGCAGTCTTAGTCCTCCACCGCCTTACAGGGATCGTAGACACTCGCCTCCCAGACGGTCTCCTCCTCCACCTTACAAGCGTTCCAGGAGGGATGATGGTGGATATGATGGAAGAAAGGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGGTTTGGCTATGATTATGGTGGGGGATATGAGCGGGAAATGCGAGGCCGGCCTGGATATGTTGATGAAAGACCTCCAGGTCGATACATTGGTCGTTCATCCGGTGGCTATCAAGACTGGGATTCTAGTCGTGGTGGGCATGGTGATGCACTCAATGCAGGAGGTGGCCAAAGATATCAAGAATACAAGTCAGAGTATATTACAACACAGAAACAAGCCTTTTTTGATTCTCATAAGGATGAAGAATGGAGGAATGAACTTGCACAAAGAACTGCTAAGGATTTTTTGCTTGACCTGCAAAGTGGAACACTGGAATTAGGTCCAGGGATCAATGCAGCAGCTACAAATAAATCAGGGCAGGCTAGTGAACCAAATTCAGATGATGAAGCAGACAATGATGGCAAACGGAGGCGTCATGGTAGAGGACCAGCAAAAGAAATGGATCTTATTTCTGCTGCTCCTAAGGCCCACCCTGTTAGTTCTGAACAAAGACGAATCCAGATTGACATTGAACAAGCTCAAGCGCTTGTCCGTAAACTTGATTCCGAGAAAGGAATAGAAGAAAATATTTTAAGTGGTTCTGATAGTGACAAACTAGGTCGGGAAAAAGCACATGGTGGCTCTTCTGGTCCAGTCATAATCATACGGGGGCTGACAACTGTGAAAGGCTTGGAGGGTGTTGAGCTATTGGACACACTTCTCACATATCTGTGGCGCATCCATGGTCTAGATTACTATGGAATGGTCGAGACAAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGGAAGAACTCTAACATGGCTGTTGGTGCTGATGAGTGGGAGAAGAAACTTGACTTGCGCTGGCAAGAGAGATTGAGAGGTCAGGATCTGTTGGAAGTGATGACTGCCAAGGATAAAATAGAGGCTGCTGCTCTTGAATCTTTTGATCCATATGTTCGCAAGATAAGAGATGAAAAATATGGATGGAAATATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCCCCTGAGTTTGTACATAAGCATCTTAACTTGAAACATCCCGAGCTTGTGATGGAACTGACTTCAAAAGTGCGTGAGGAGCTGTATTTCCAAAATTACATGAATGATGCAGATGCTCCTGGAGGGACGCCTGTTATGCAACAATCACTTCCGAAGGATAAGCCACAGAGACGTAGGATGAATTTAGATGGTCGGCTGAAGGATGACAGAGGCAATCGCAGGGACCGCGATAATTGGGCTAATGGGGGTGACAGATTTGATAGATCGGAGAACCCACAATCAAGTGATTTCCAATCAGCAAATGATGGTACGGATGGTGGAAACATTGATGATCCTATGTTTGATACTTTTGGTGGACAAGGAAGACATGTTGCTCCTTTTGCCTCTGAAATACCACCGCCAGTGCTTATGCCCGTTCCTGGTGCTGGTCCATTAGGACCTTTTGTCCCTGCTCCGCCTGAAGTTGCAATGAGAATGTTGCGGGAACAAGGAGGCCCCCCTCCTTTTGAGGGTGGTGGTAGAAATGGAAGGCCAGGAGCTCAATTAGGTGGATCTGCTCCAATCCTTGCTTTATCTTCAGGTTTTCGACAGGATCCTCGTCGAATACGGAGTTATCAAGACCTAGACGCACCCGAGGACGAAGTCACTGTAATAGATTATAGAAGCTTGTAG 2136 48.13 MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDRDIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPPPPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIGRSSGGYQDWDSSRGGHGDALNAGGGQRYQEYKSEYITTQKQAFFDSHKDEEWRNELAQRTAKDFLLDLQSGTLELGPGINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPILALSSGFRQDPRRIRSYQDLDAPEDEVTVIDYRSL 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4768761 4776405 - Lsi06G004370.1 Lsi06g00437 665167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi06g00437 711 MobiDBLite consensus disorder prediction 154 171 - -
Lsi06g00437 711 PANTHER ARSENITE-RESISTANCE PROTEIN 2 198 711 IPR039727 GO:0006397
Lsi06g00437 711 MobiDBLite consensus disorder prediction 12 28 - -
Lsi06g00437 711 MobiDBLite consensus disorder prediction 540 572 - -
Lsi06g00437 711 Pfam Arsenite-resistance protein 2 411 614 IPR007042 -
Lsi06g00437 711 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 191 - -
Lsi06g00437 711 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 198 711 - -
Lsi06g00437 711 ProSitePatterns Zinc finger C2H2 type domain signature. 478 501 IPR013087 -
Lsi06g00437 711 MobiDBLite consensus disorder prediction 523 609 - -
Lsi06g00437 711 MobiDBLite consensus disorder prediction 45 136 - -
Lsi06g00437 711 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 191 IPR039727 GO:0006397
Lsi06g00437 711 MobiDBLite consensus disorder prediction 255 313 - -
Lsi06g00437 711 MobiDBLite consensus disorder prediction 277 294 - -
Lsi06g00437 711 MobiDBLite consensus disorder prediction 30 44 - -
Lsi06g00437 711 MobiDBLite consensus disorder prediction 1 204 - -
Lsi06g00437 711 Coils Coil 312 332 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi06g00437 - - csv:101219335 1097.03