Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lsi06g00461 | ATGTTGAAGCGAAAAAAAGTCTTTGCAACCCTGAAAGTATTAGCAGTGATACTGGAGCAACTCAGTGATGCAATTCCTGAAGAGATGAAAAGACTCATGGAATTGGATGCGGCAATGACAGAGGACCTAATTGCGTATAATATTATTCCGTTAGATGCTCCTTCTGTGACAAATGCTATTGGGTCCTTGGCTGAGGTGCAAGCAGCAGTGTCAGCTTTAAAGTATTTCAGTGGCCTTCCAAAGTTGCCCGCAGAATTTTCTATTCCGGAGACTAGGAGTCCTGATATACTTGACTTTCTACACTTCGTCTTTGGATTTCAGAAAGACAATGTGTCTAATCAGCGCGAACATGTAGTGCACCTACTTGCCAATGAACAATCTCGACTTCGTATACTCGAAGAAACTGAACCAAAATTGGATGCAGCTGCTGTGGAGGGTGTTTTTAAGAAGTCTCTGGAAAACTACGTTAAATGGTGTGAACATTTATGCATCCAACCTGTATGGAGCAGTTTGTCTGCTGTTAGCAAGGAAAAGAAGCTATTATTTATTTCCTTATACTTTCTTATATGGGGGGAAGCATCCAACGTCAGATTTCTTCCAGAATGCTTATGCTACATATTTCACCATATGGTTCGGGAAATGGATGAGGTATTGAGGCATCAGATTGCGCAGCCAGCCAAGAGCTGCGAGTCTAAAGATGGTGTTTCTTTCCTTGATCAAGTTATCTGTCCTCTTTACGAGGTTCTAGCTGCGGAAGCTGCAAACAATAATAATGGGCAGGCACCACATTCTGGATGGAGAAACTATGATGATTTT | 816 | 41.91 | MLKRKKVFATLKVLAVILEQLSDAIPEEMKRLMELDAAMTEDLIAYNIIPLDAPSVTNAIGSLAEVQAAVSALKYFSGLPKLPAEFSIPETRSPDILDFLHFVFGFQKDNVSNQREHVVHLLANEQSRLRILEETEPKLDAAAVEGVFKKSLENYVKWCEHLCIQPVWSSLSAVSKEKKLLFISLYFLIWGEASNVRFLPECLCYIFHHMVREMDEVLRHQIAQPAKSCESKDGVSFLDQVICPLYEVLAAEAANNNNGQAPHSGWRNYDDF | 272 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 5162790 | 5179004 | - | Lsi06G004610.1 | Lsi06g00461 | 665191 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lsi06g00461 | 272 | SMART | FKS1_dom1_2 | 177 | 272 | IPR026899 | - | |
| Lsi06g00461 | 272 | PANTHER | BNAC03G35120D PROTEIN | 2 | 272 | - | - | |
| Lsi06g00461 | 272 | Pfam | 1,3-beta-glucan synthase subunit FKS1, domain-1 | 179 | 272 | IPR026899 | - | |
| Lsi06g00461 | 272 | PANTHER | LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 | 2 | 272 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lsi06g00461 | Lsi-Chr6:5162790 | Lsi06g01620 | Lsi-Chr6:26512684 | 5.07E-73 | dispersed | |
| Lsi06g00461 | Lsi-Chr6:5162790 | Lsi06g00462 | Lsi-Chr6:5209926 | 8.17E-174 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lsi06g00461 | K11000 | - | csv:101216435 | 505.753 |