Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi06g00472 ATGAGGCCTGTCAAACGGGAACCCACCGCCACCAGCCGTAGTAATCGGAGTAGAGGTGGCGGCGATGGCGGCGCTGTCGATGCTGCGAGTATAAGGGATATTAAGCGGGAGAGGGTTGCTCGGGAGCGAGAGAACTCCGGCGAGGACAACACGACTGAAGAAGTGGGTCAGCAAGACTTGACGAAGCGGCGGGTCCTTCGCTCTCGGTACCTCGCGGTCATTCATGAGATTAGTGAAAGAAGAGAGGATTTGTCGAAGGATCTGGATAAGTTTAATGTTATCATCAATGAAGTGGAAAAGTTGCACGAGCAAGTACAAAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCGTTGCAAGATATTGCAAACTCCCTCGTGACCTCTATTAGGTCCCAATCAAATGAAGGTGTTACTCCATCAGATTTTGTTAGTTGTCTGCTCAGAGAGTTTGCTGACATTAACACTAGCATAAAATCTGAAGAACATGACCTGGTTTCTGTCAGTTGGAAAGATATTGGACGCAGTGTTTCGTCTATTTTCATGAATGGCCATGGATGCCGCACCATGCTTGGACCTATGAGCAATCAGTTGAAGCAGCGAAAGACTAATAATATTTCCAGGAAACGTTCCAGGCCTACTGAGAGTTCTAGACCTGCAGAGGTTGAAGATAATGGGTCTGAAGCAAAAACAGACACAGATAAGAACATGGGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAAACTAGAACATTTGATATTGAATAGAAAGTCTTTTGCACAGACAGTAGAGAATTTATTTGCTCTATCCTTTCTGGTTAAGGATGGTCGGGCTGAGATAACTATTGATAAAAATGGTTCTCATTTTGTGTCACCGAAGAATGCCCCTGCCCATAGTGCCATTATGTCACATGAAGTTAATTACAGTCATTTTGTATTCAGATTCGATTACAAGGATTGGAAGCCAATGGTGGATATGGTACCAGTTGGAGAAGAGCTGATGCCCCACAGGAACTCTCTGAACTCAGTGCAGGTGTCCCAAGAAGAAGCAACAGCAGATGATGCTGAAGCAGCAGCCTTACCTACTACACCAATCCGAAAGCTGTCGAGAAATCGAGGTTTAGTTATGCAAACTGTTGTTGAAGATTCACCTGATAATGACACTCATTCAGGAGCAACTGCAATTTTGAGGTGCAAAAGAAAGCTTAGTCAAGGTTAG 1224 44.61 MRPVKREPTATSRSNRSRGGGDGGAVDAASIRDIKRERVARERENSGEDNTTEEVGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINTSIKSEEHDLVSVSWKDIGRSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEAKTDTDKNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSAIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNSLNSVQVSQEEATADDAEAAALPTTPIRKLSRNRGLVMQTVVEDSPDNDTHSGATAILRCKRKLSQG 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5451463 5454421 - Lsi06G004720.1 Lsi06g00472 665202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi06g00472 407 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 33 404 - -
Lsi06g00472 407 MobiDBLite consensus disorder prediction 29 59 - -
Lsi06g00472 407 PANTHER UNCHARACTERIZED 33 404 IPR027786 GO:0005634|GO:0006281|GO:0030915
Lsi06g00472 407 MobiDBLite consensus disorder prediction 207 230 - -
Lsi06g00472 407 MobiDBLite consensus disorder prediction 190 232 - -
Lsi06g00472 407 MobiDBLite consensus disorder prediction 1 59 - -
Lsi06g00472 407 Pfam Nse4 C-terminal 249 336 IPR014854 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi06g00472 K22825 - csv:101220149 701.819